RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 GTPBP6O43824 516 aaPredicted RBP15.73■□□□□ 0.11
UBBP4-202ENST00000584755 PEX10O60683 326 aa15.73■□□□□ 0.11
UBBP4-202ENST00000584755 MYL1P05976 194 aa15.73■□□□□ 0.11
UBBP4-202ENST00000584755 ARP10275 920 aa15.73■□□□□ 0.11
UBBP4-202ENST00000584755 EIF2AK2P19525 551 aaKnown RBP15.73■□□□□ 0.11
UBBP4-202ENST00000584755 PPP2R5CQ13362 524 aa15.73■□□□□ 0.11
UBBP4-202ENST00000584755 UVSSAQ2YD98 709 aa15.73■□□□□ 0.11
UBBP4-202ENST00000584755 ARHGEF16Q5VV41 709 aa15.73■□□□□ 0.11
UBBP4-202ENST00000584755 B3GNT9Q6UX72 402 aa15.73■□□□□ 0.11
UBBP4-202ENST00000584755 RASAL3Q86YV0 1011 aa15.73■□□□□ 0.11
UBBP4-202ENST00000584755 TRIML1Q8N9V2 468 aa15.73■□□□□ 0.11
UBBP4-202ENST00000584755 SHCBP1Q8NEM2 672 aa15.73■□□□□ 0.11
UBBP4-202ENST00000584755 DNERQ8NFT8 737 aa15.73■□□□□ 0.11
UBBP4-202ENST00000584755 SNX29Q8TEQ0 813 aa15.73■□□□□ 0.11
UBBP4-202ENST00000584755 PURBQ96QR8 312 aaKnown RBP15.73■□□□□ 0.11
UBBP4-202ENST00000584755 NUDT12Q9BQG2 462 aa15.73■□□□□ 0.11
UBBP4-202ENST00000584755 PAGR1Q9BTK6 254 aa15.73■□□□□ 0.11
UBBP4-202ENST00000584755 JADE2Q9NQC1 790 aa15.73■□□□□ 0.11
UBBP4-202ENST00000584755 STK17AQ9UEE5 414 aa15.73■□□□□ 0.11
UBBP4-202ENST00000584755 KDM3AQ9Y4C1 1321 aa15.73■□□□□ 0.11
UBBP4-202ENST00000584755 PDHXO00330 501 aa15.72■□□□□ 0.11
UBBP4-202ENST00000584755 KIF3CO14782 793 aa15.72■□□□□ 0.11
UBBP4-202ENST00000584755 SMC2O95347 1197 aa15.72■□□□□ 0.11
UBBP4-202ENST00000584755 Q3C1V9 767 aa15.72■□□□□ 0.11
UBBP4-202ENST00000584755 OTOP1Q7RTM1 612 aa15.72■□□□□ 0.11
UBBP4-202ENST00000584755 SAPCD2Q86UD0 394 aa15.72■□□□□ 0.11
UBBP4-202ENST00000584755 RNF214Q8ND24 703 aa15.72■□□□□ 0.11
UBBP4-202ENST00000584755 RASSF8Q8NHQ8 419 aa15.72■□□□□ 0.11
UBBP4-202ENST00000584755 SMARCE1Q969G3 411 aa15.72■□□□□ 0.11
UBBP4-202ENST00000584755 RIT2Q99578 217 aa15.72■□□□□ 0.11
UBBP4-202ENST00000584755 DNAJC25Q9H1X3 360 aa15.72■□□□□ 0.11
UBBP4-202ENST00000584755 KCNH7Q9NS40 1196 aa15.72■□□□□ 0.11
UBBP4-202ENST00000584755 BLOC1S4Q9NUP1 217 aa15.72■□□□□ 0.11
UBBP4-202ENST00000584755 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.71■□□□□ 0.11
UBBP4-202ENST00000584755 STAM2O75886 525 aa15.71■□□□□ 0.11
UBBP4-202ENST00000584755 NR3C2P08235 984 aa15.71■□□□□ 0.11
UBBP4-202ENST00000584755 CYP2C8P10632 490 aa15.71■□□□□ 0.11
UBBP4-202ENST00000584755 ERCC3P19447 782 aa15.71■□□□□ 0.11
UBBP4-202ENST00000584755 CCND2P30279 289 aa15.71■□□□□ 0.11
UBBP4-202ENST00000584755 AFMP43652 599 aa15.71■□□□□ 0.11
UBBP4-202ENST00000584755 ERVK-9P63128 1117 aa15.71■□□□□ 0.11
UBBP4-202ENST00000584755 ERVK-24P63145 666 aa15.71■□□□□ 0.11
UBBP4-202ENST00000584755 MORC3Q14149 939 aa15.71■□□□□ 0.11
UBBP4-202ENST00000584755 ECM1Q16610 540 aa15.71■□□□□ 0.11
UBBP4-202ENST00000584755 LRCH2Q5VUJ6 765 aa15.71■□□□□ 0.11
UBBP4-202ENST00000584755 C11orf57Q6ZUT1 292 aaPredicted RBP15.71■□□□□ 0.11
UBBP4-202ENST00000584755 NCAPG2Q86XI2 1143 aa15.71■□□□□ 0.11
UBBP4-202ENST00000584755 ANKRD35Q8N283 1001 aa15.71■□□□□ 0.11
UBBP4-202ENST00000584755 KCTD17Q8N5Z5 321 aa15.71■□□□□ 0.11
UBBP4-202ENST00000584755 INPP4AQ96PE3 977 aaPredicted RBP15.71■□□□□ 0.11
UBBP4-202ENST00000584755 GSDMAQ96QA5 445 aa15.71■□□□□ 0.11
UBBP4-202ENST00000584755 IWS1Q96ST2 819 aa15.71■□□□□ 0.11
UBBP4-202ENST00000584755 PTPN18Q99952 460 aa15.71■□□□□ 0.11
UBBP4-202ENST00000584755 BPIFA3Q9BQP9 254 aa15.71■□□□□ 0.11
UBBP4-202ENST00000584755 ZNF577Q9BSK1 485 aa15.71■□□□□ 0.11
UBBP4-202ENST00000584755 WDR11Q9BZH6 1224 aa15.71■□□□□ 0.11
UBBP4-202ENST00000584755 NT5C3AQ9H0P0 336 aa15.71■□□□□ 0.11
UBBP4-202ENST00000584755 MROH8Q9H579 483 aa15.71■□□□□ 0.11
UBBP4-202ENST00000584755 GPBP1L1Q9HC44 474 aaPredicted RBP15.71■□□□□ 0.11
UBBP4-202ENST00000584755 MORF4L1Q9UBU8 362 aa15.71■□□□□ 0.11
UBBP4-202ENST00000584755 MAN1B1Q9UKM7 699 aa15.71■□□□□ 0.11
UBBP4-202ENST00000584755 A0A087WWV3 80 aa15.71■□□□□ 0.1
UBBP4-202ENST00000584755 IPO5O00410 1097 aaKnown RBP15.71■□□□□ 0.1
UBBP4-202ENST00000584755 MAFGO15525 162 aa15.71■□□□□ 0.1
UBBP4-202ENST00000584755 BMP6P22004 513 aa15.71■□□□□ 0.1
UBBP4-202ENST00000584755 RPA1P27694 616 aa15.71■□□□□ 0.1
UBBP4-202ENST00000584755 GCLCP48506 637 aaPredicted RBP15.71■□□□□ 0.1
UBBP4-202ENST00000584755 ZNF165P49910 485 aa15.71■□□□□ 0.1
UBBP4-202ENST00000584755 MKRN3Q13064 507 aaKnown RBP15.71■□□□□ 0.1
UBBP4-202ENST00000584755 SEMA3FQ13275 785 aa15.71■□□□□ 0.1
UBBP4-202ENST00000584755 IQCB1Q15051 598 aa15.71■□□□□ 0.1
UBBP4-202ENST00000584755 ZRSR1Q15695 479 aaKnown RBP15.71■□□□□ 0.1
UBBP4-202ENST00000584755 DPCR1Q3MIW9 517 aa15.71■□□□□ 0.1
UBBP4-202ENST00000584755 HAUS3Q68CZ6 603 aa15.71■□□□□ 0.1
UBBP4-202ENST00000584755 FAM43AQ8N2R8 423 aa15.71■□□□□ 0.1
UBBP4-202ENST00000584755 FAM133AQ8N9E0 248 aa15.71■□□□□ 0.1
UBBP4-202ENST00000584755 ERMNQ8TAM6 284 aa15.71■□□□□ 0.1
UBBP4-202ENST00000584755 GPRASP2Q96D09 838 aa15.71■□□□□ 0.1
UBBP4-202ENST00000584755 POLR3CQ9BUI4 534 aaPredicted RBP15.71■□□□□ 0.1
UBBP4-202ENST00000584755 CBX8Q9HC52 389 aa15.71■□□□□ 0.1
UBBP4-202ENST00000584755 AGO4Q9HCK5 861 aaKnown RBP15.71■□□□□ 0.1
UBBP4-202ENST00000584755 ASTN1O14525 1302 aa15.7■□□□□ 0.1
UBBP4-202ENST00000584755 BIN1O00499 593 aa15.7■□□□□ 0.1
UBBP4-202ENST00000584755 DHX15O43143 795 aaKnown RBP15.7■□□□□ 0.1
UBBP4-202ENST00000584755 GAS7O60861 476 aa15.7■□□□□ 0.1
UBBP4-202ENST00000584755 EDNRBP24530 442 aa15.7■□□□□ 0.1
UBBP4-202ENST00000584755 CCT6AP40227 531 aaKnown RBP15.7■□□□□ 0.1
UBBP4-202ENST00000584755 MTMR1Q13613 665 aa15.7■□□□□ 0.1
UBBP4-202ENST00000584755 CUL4BQ13620 913 aa15.7■□□□□ 0.1
UBBP4-202ENST00000584755 RGMBQ6NW40 437 aa15.7■□□□□ 0.1
UBBP4-202ENST00000584755 CNNM4Q6P4Q7 775 aa15.7■□□□□ 0.1
UBBP4-202ENST00000584755 LARP4BQ92615 738 aaKnown RBP15.7■□□□□ 0.1
UBBP4-202ENST00000584755 RAD54LQ92698 747 aa15.7■□□□□ 0.1
UBBP4-202ENST00000584755 CDK5RAP3Q96JB5 506 aa15.7■□□□□ 0.1
UBBP4-202ENST00000584755 ZFP91Q96JP5 570 aaPredicted RBP15.7■□□□□ 0.1
UBBP4-202ENST00000584755 UIMC1Q96RL1 719 aa15.7■□□□□ 0.1
UBBP4-202ENST00000584755 PLIN2Q99541 437 aa15.7■□□□□ 0.1
UBBP4-202ENST00000584755 C7orf25Q9BPX7 421 aa15.7■□□□□ 0.1
UBBP4-202ENST00000584755 TEKT3Q9BXF9 490 aa15.7■□□□□ 0.1
UBBP4-202ENST00000584755 R3HDMLQ9H3Y0 253 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms