RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 CHMP4BQ9H444 224 aaKnown RBP6.33□□□□□ -1.4
VAPA-207ENST00000583879 EPHX3Q9H6B9 360 aa6.33□□□□□ -1.4
VAPA-207ENST00000583879 ECHDC1Q9NTX5 307 aa6.33□□□□□ -1.4
VAPA-207ENST00000583879 RNF146Q9NTX7 359 aa6.33□□□□□ -1.4
VAPA-207ENST00000583879 CYP39A1Q9NYL5 469 aa6.33□□□□□ -1.4
VAPA-207ENST00000583879 DDX19BQ9UMR2 479 aa6.33□□□□□ -1.4
VAPA-207ENST00000583879 COG5Q9UP83 839 aa6.33□□□□□ -1.4
VAPA-207ENST00000583879 MTCH2Q9Y6C9 303 aa6.33□□□□□ -1.4
VAPA-207ENST00000583879 KIF28PB7ZC32 967 aa6.32□□□□□ -1.4
VAPA-207ENST00000583879 CA3P07451 260 aa6.32□□□□□ -1.4
VAPA-207ENST00000583879 ZFYP08048 801 aaPredicted RBP6.32□□□□□ -1.4
VAPA-207ENST00000583879 TSPY3P0CV98 308 aa6.32□□□□□ -1.4
VAPA-207ENST00000583879 TSPY8P0CW00 308 aa6.32□□□□□ -1.4
VAPA-207ENST00000583879 CYP2C9P11712 490 aa6.32□□□□□ -1.4
VAPA-207ENST00000583879 ACTN1P12814 892 aa6.32□□□□□ -1.4
VAPA-207ENST00000583879 ALAS1P13196 640 aa6.32□□□□□ -1.4
VAPA-207ENST00000583879 CDK11BP21127 795 aaKnown RBP6.32□□□□□ -1.4
VAPA-207ENST00000583879 VARSP26640 1264 aaKnown RBP6.32□□□□□ -1.4
VAPA-207ENST00000583879 SLC1A4P43007 532 aa6.32□□□□□ -1.4
VAPA-207ENST00000583879 TDO2P48775 406 aa6.32□□□□□ -1.4
VAPA-207ENST00000583879 HNRNPUQ00839 825 aaKnown RBP eCLIP6.32□□□□□ -1.4
VAPA-207ENST00000583879 PDE4BQ07343 736 aa6.32□□□□□ -1.4
VAPA-207ENST00000583879 NNTQ13423 1086 aa6.32□□□□□ -1.4
VAPA-207ENST00000583879 LINC01559Q495D7 138 aa6.32□□□□□ -1.4
VAPA-207ENST00000583879 DUSP28Q4G0W2 176 aa6.32□□□□□ -1.4
VAPA-207ENST00000583879 DEFB128Q7Z7B8 93 aa6.32□□□□□ -1.4
VAPA-207ENST00000583879 FBXO16Q8IX29 292 aaPredicted RBP6.32□□□□□ -1.4
VAPA-207ENST00000583879 IFNL3Q8IZI9 196 aa6.32□□□□□ -1.4
VAPA-207ENST00000583879 MORC4Q8TE76 937 aa6.32□□□□□ -1.4
VAPA-207ENST00000583879 PURBQ96QR8 312 aaKnown RBP6.32□□□□□ -1.4
VAPA-207ENST00000583879 LRFN3Q9BTN0 628 aa6.32□□□□□ -1.4
VAPA-207ENST00000583879 WDR11Q9BZH6 1224 aa6.32□□□□□ -1.4
VAPA-207ENST00000583879 LRRCC1Q9C099 1032 aa6.32□□□□□ -1.4
VAPA-207ENST00000583879 CERS4Q9HA82 394 aa6.32□□□□□ -1.4
VAPA-207ENST00000583879 VTA1Q9NP79 307 aa6.32□□□□□ -1.4
VAPA-207ENST00000583879 TRMT13Q9NUP7 481 aaKnown RBP6.32□□□□□ -1.4
VAPA-207ENST00000583879 EVA1BQ9NVM1 165 aa6.32□□□□□ -1.4
VAPA-207ENST00000583879 POLR3EQ9NVU0 708 aa6.32□□□□□ -1.4
VAPA-207ENST00000583879 PRR12Q9ULL5 1215 aa6.32□□□□□ -1.4
VAPA-207ENST00000583879 DDX49Q9Y6V7 483 aaKnown RBP6.32□□□□□ -1.4
VAPA-207ENST00000583879 XIRP2A4UGR9 3374 aa6.31□□□□□ -1.4
VAPA-207ENST00000583879 TNKSO95271 1327 aa6.31□□□□□ -1.4
VAPA-207ENST00000583879 RBM47A0AV96 593 aaKnown RBP6.31□□□□□ -1.4
VAPA-207ENST00000583879 GPAA1O43292 621 aa6.31□□□□□ -1.4
VAPA-207ENST00000583879 SMARCA5O60264 1052 aaPredicted RBP6.31□□□□□ -1.4
VAPA-207ENST00000583879 SLC3A2P08195 630 aaKnown RBP6.31□□□□□ -1.4
VAPA-207ENST00000583879 IQCF3P0C7M6 154 aa6.31□□□□□ -1.4
VAPA-207ENST00000583879 RFC2P35250 354 aa6.31□□□□□ -1.4
VAPA-207ENST00000583879 CPT1AP50416 773 aa6.31□□□□□ -1.4
VAPA-207ENST00000583879 SNAP25P60880 206 aa6.31□□□□□ -1.4
VAPA-207ENST00000583879 PURAQ00577 322 aaKnown RBP6.31□□□□□ -1.4
VAPA-207ENST00000583879 TAP1Q03518 808 aa6.31□□□□□ -1.4
VAPA-207ENST00000583879 IKQ13123 557 aaPredicted RBP6.31□□□□□ -1.4
VAPA-207ENST00000583879 BAATQ14032 418 aaPredicted RBP6.31□□□□□ -1.4
VAPA-207ENST00000583879 PTPRNQ16849 979 aa6.31□□□□□ -1.4
VAPA-207ENST00000583879 MUM1L1Q5H9M0 696 aa6.31□□□□□ -1.4
VAPA-207ENST00000583879 TMEM31Q5JXX7 168 aa6.31□□□□□ -1.4
VAPA-207ENST00000583879 KRT40Q6A162 431 aa6.31□□□□□ -1.4
VAPA-207ENST00000583879 NSMFQ6X4W1 530 aa6.31□□□□□ -1.4
VAPA-207ENST00000583879 KCTD1Q719H9 257 aa6.31□□□□□ -1.4
VAPA-207ENST00000583879 PARP9Q8IXQ6 854 aa6.31□□□□□ -1.4
VAPA-207ENST00000583879 RETREG2Q8NC44 543 aa6.31□□□□□ -1.4
VAPA-207ENST00000583879 ARNTL2Q8WYA1 636 aa6.31□□□□□ -1.4
VAPA-207ENST00000583879 BAP1Q92560 729 aa6.31□□□□□ -1.4
VAPA-207ENST00000583879 CHMP4CQ96CF2 233 aa6.31□□□□□ -1.4
VAPA-207ENST00000583879 SLC9A7Q96T83 725 aa6.31□□□□□ -1.4
VAPA-207ENST00000583879 MTG1Q9BT17 334 aaPredicted RBP6.31□□□□□ -1.4
VAPA-207ENST00000583879 NACAP1Q9BZK3 213 aa6.31□□□□□ -1.4
VAPA-207ENST00000583879 EPB41L4AQ9HCS5 686 aaPredicted RBP6.31□□□□□ -1.4
VAPA-207ENST00000583879 IL17RBQ9NRM6 502 aa6.31□□□□□ -1.4
VAPA-207ENST00000583879 ADD3Q9UEY8 706 aaKnown RBP6.31□□□□□ -1.4
VAPA-207ENST00000583879 ISY1Q9ULR0 285 aaKnown RBP6.31□□□□□ -1.4
VAPA-207ENST00000583879 ZNFX1Q9P2E3 1918 aaKnown RBP6.31□□□□□ -1.4
VAPA-207ENST00000583879 NAV1Q8NEY1 1877 aa6.3□□□□□ -1.4
VAPA-207ENST00000583879 LOC102724159A0A0B4J2E5 919 aa6.3□□□□□ -1.4
VAPA-207ENST00000583879 EPOPA6NHQ4 379 aa6.3□□□□□ -1.4
VAPA-207ENST00000583879 M0R2C6 588 aa6.3□□□□□ -1.4
VAPA-207ENST00000583879 KPNA6O60684 536 aa6.3□□□□□ -1.4
VAPA-207ENST00000583879 GPR37L1O60883 481 aa6.3□□□□□ -1.4
VAPA-207ENST00000583879 ADH1CP00326 375 aa6.3□□□□□ -1.4
VAPA-207ENST00000583879 ICAM1P05362 532 aa6.3□□□□□ -1.4
VAPA-207ENST00000583879 MYL3P08590 195 aa6.3□□□□□ -1.4
VAPA-207ENST00000583879 VSIG8P0DPA2 414 aa6.3□□□□□ -1.4
VAPA-207ENST00000583879 NOVP48745 357 aa6.3□□□□□ -1.4
VAPA-207ENST00000583879 ALDH5A1P51649 535 aaPredicted RBP6.3□□□□□ -1.4
VAPA-207ENST00000583879 WDR4P57081 412 aaKnown RBP6.3□□□□□ -1.4
VAPA-207ENST00000583879 PTPN11Q06124 597 aaPredicted RBP6.3□□□□□ -1.4
VAPA-207ENST00000583879 PPARAQ07869 468 aa6.3□□□□□ -1.4
VAPA-207ENST00000583879 SUZ12Q15022 739 aaKnown RBP6.3□□□□□ -1.4
VAPA-207ENST00000583879 PWP2Q15269 919 aaKnown RBP6.3□□□□□ -1.4
VAPA-207ENST00000583879 LRRFIP1Q32MZ4 808 aaKnown RBP6.3□□□□□ -1.4
VAPA-207ENST00000583879 NBPF20Q3BBV1 942 aa6.3□□□□□ -1.4
VAPA-207ENST00000583879 BRDTQ58F21 947 aaPredicted RBP6.3□□□□□ -1.4
VAPA-207ENST00000583879 NFRKBQ6P4R8 1299 aa6.3□□□□□ -1.4
VAPA-207ENST00000583879 HERC6Q8IVU3 1022 aa6.3□□□□□ -1.4
VAPA-207ENST00000583879 ZNF511Q8NB15 262 aa6.3□□□□□ -1.4
VAPA-207ENST00000583879 FTOQ9C0B1 505 aaKnown RBP eCLIP6.3□□□□□ -1.4
VAPA-207ENST00000583879 NAPBQ9H115 298 aa6.3□□□□□ -1.4
VAPA-207ENST00000583879 INCENPQ9NQS7 918 aa6.3□□□□□ -1.4
VAPA-207ENST00000583879 LMCD1Q9NZU5 365 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms