RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, human

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-223	ENST00000583877	MX1	P20591	662 aa		10.24	□□□□□ -0.77
NUP85-223	ENST00000583877	IKBKE	Q14164	716 aa		10.24	□□□□□ -0.77
NUP85-223	ENST00000583877	DGKD	Q16760	1214 aa		10.24	□□□□□ -0.77
NUP85-223	ENST00000583877	LY6K	Q17RY6	165 aa		10.24	□□□□□ -0.77
NUP85-223	ENST00000583877	RRP12	Q5JTH9	1297 aa	Known RBP	10.24	□□□□□ -0.77
NUP85-223	ENST00000583877	PPP1R15B	Q5SWA1	713 aa		10.24	□□□□□ -0.77
NUP85-223	ENST00000583877	GJD3	Q8N144	294 aa		10.24	□□□□□ -0.77
NUP85-223	ENST00000583877	C7orf31	Q8N865	590 aa		10.24	□□□□□ -0.77
NUP85-223	ENST00000583877	IWS1	Q96ST2	819 aa		10.24	□□□□□ -0.77
NUP85-223	ENST00000583877	KATNAL1	Q9BW62	490 aa		10.24	□□□□□ -0.77
NUP85-223	ENST00000583877	TOMM22	Q9NS69	142 aa		10.24	□□□□□ -0.77
NUP85-223	ENST00000583877	MTUS1	Q9ULD2	1270 aa		10.24	□□□□□ -0.77
NUP85-223	ENST00000583877	COL4A6	Q14031	1691 aa		10.24	□□□□□ -0.77
NUP85-223	ENST00000583877	CFAP54	Q96N23	3096 aa		10.23	□□□□□ -0.77
NUP85-223	ENST00000583877	FGA	P02671	866 aa		10.23	□□□□□ -0.77
NUP85-223	ENST00000583877	PC	P11498	1178 aa	Known RBP	10.23	□□□□□ -0.77
NUP85-223	ENST00000583877	ALAD	P13716	330 aa		10.23	□□□□□ -0.77
NUP85-223	ENST00000583877	KCNA5	P22460	613 aa		10.23	□□□□□ -0.77
NUP85-223	ENST00000583877	PSEN2	P49810	448 aa		10.23	□□□□□ -0.77
NUP85-223	ENST00000583877	PTK7	Q13308	1070 aa		10.23	□□□□□ -0.77
NUP85-223	ENST00000583877	STXBP2	Q15833	593 aa		10.23	□□□□□ -0.77
NUP85-223	ENST00000583877	TCTN1	Q2MV58	587 aa		10.23	□□□□□ -0.77
NUP85-223	ENST00000583877	PUS10	Q3MIT2	529 aa	Known RBP	10.23	□□□□□ -0.77
NUP85-223	ENST00000583877	USH1G	Q495M9	461 aa		10.23	□□□□□ -0.77
NUP85-223	ENST00000583877	GPATCH4	Q5T3I0	446 aa	Known RBP	10.23	□□□□□ -0.77
NUP85-223	ENST00000583877	SEPT14	Q6ZU15	432 aa		10.23	□□□□□ -0.77
NUP85-223	ENST00000583877	CHST3	Q7LGC8	479 aa		10.23	□□□□□ -0.77
NUP85-223	ENST00000583877	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	10.23	□□□□□ -0.77
NUP85-223	ENST00000583877	OTUD7A	Q8TE49	926 aa	Predicted RBP	10.23	□□□□□ -0.77
NUP85-223	ENST00000583877	NSUN6	Q8TEA1	469 aa	Known RBP	10.23	□□□□□ -0.77
NUP85-223	ENST00000583877	EMID1	Q96A84	441 aa	Predicted RBP	10.23	□□□□□ -0.77
NUP85-223	ENST00000583877	CRBN	Q96SW2	442 aa		10.23	□□□□□ -0.77
NUP85-223	ENST00000583877	HELLS	Q9NRZ9	838 aa		10.23	□□□□□ -0.77
NUP85-223	ENST00000583877	HDAC6	Q9UBN7	1215 aa		10.23	□□□□□ -0.77
NUP85-223	ENST00000583877	CTNNA3	Q9UI47	895 aa		10.23	□□□□□ -0.77
NUP85-223	ENST00000583877	INSL6	Q9Y581	213 aa		10.23	□□□□□ -0.77
NUP85-223	ENST00000583877	ABCB11	O95342	1321 aa		10.23	□□□□□ -0.77
NUP85-223	ENST00000583877	ZMYM6	O95789	1325 aa		10.23	□□□□□ -0.77
NUP85-223	ENST00000583877	TTC3	P53804	2025 aa		10.23	□□□□□ -0.77
NUP85-223	ENST00000583877	GRXCR2	A6NFK2	248 aa		10.22	□□□□□ -0.77
NUP85-223	ENST00000583877	HAS3	O00219	553 aa		10.22	□□□□□ -0.77
NUP85-223	ENST00000583877	F2	P00734	622 aa		10.22	□□□□□ -0.77
NUP85-223	ENST00000583877	HTRA4	P83105	476 aa	Predicted RBP	10.22	□□□□□ -0.77
NUP85-223	ENST00000583877	TRIM71	Q2Q1W2	868 aa	Known RBP	10.22	□□□□□ -0.77
NUP85-223	ENST00000583877	ZNF618	Q5T7W0	954 aa		10.22	□□□□□ -0.77
NUP85-223	ENST00000583877	PTCRA	Q6ISU1	281 aa	Predicted RBP	10.22	□□□□□ -0.77
NUP85-223	ENST00000583877	TRAF7	Q6Q0C0	670 aa		10.22	□□□□□ -0.77
NUP85-223	ENST00000583877	TICAM2	Q86XR7	235 aa		10.22	□□□□□ -0.77
NUP85-223	ENST00000583877	PPTC7	Q8NI37	304 aa		10.22	□□□□□ -0.77
NUP85-223	ENST00000583877	EVI5L	Q96CN4	794 aa		10.22	□□□□□ -0.77
NUP85-223	ENST00000583877	TAAR1	Q96RJ0	339 aa		10.22	□□□□□ -0.77
NUP85-223	ENST00000583877	DDX41	Q9UJV9	622 aa	Known RBP	10.22	□□□□□ -0.77
NUP85-223	ENST00000583877	EMSY	Q7Z589	1322 aa		10.22	□□□□□ -0.77
NUP85-223	ENST00000583877	SALL3	Q9BXA9	1300 aa		10.22	□□□□□ -0.77
NUP85-223	ENST00000583877	TECTA	O75443	2155 aa		10.22	□□□□□ -0.77
NUP85-223	ENST00000583877	LGR5	O75473	907 aa		10.21	□□□□□ -0.77
NUP85-223	ENST00000583877	EIF3J	O75822	258 aa	Known RBP	10.21	□□□□□ -0.77
NUP85-223	ENST00000583877	AMH	P03971	560 aa		10.21	□□□□□ -0.77
NUP85-223	ENST00000583877	IL9	P15248	144 aa		10.21	□□□□□ -0.77
NUP85-223	ENST00000583877	SSTR3	P32745	418 aa	Predicted RBP	10.21	□□□□□ -0.77
NUP85-223	ENST00000583877	LAMC2	Q13753	1193 aa		10.21	□□□□□ -0.77
NUP85-223	ENST00000583877	MBTPS1	Q14703	1052 aa		10.21	□□□□□ -0.77
NUP85-223	ENST00000583877	PTPRO	Q16827	1216 aa		10.21	□□□□□ -0.77
NUP85-223	ENST00000583877	KIAA0753	Q2KHM9	967 aa		10.21	□□□□□ -0.77
NUP85-223	ENST00000583877	MCMDC2	Q4G0Z9	681 aa		10.21	□□□□□ -0.77
NUP85-223	ENST00000583877	FAM117B	Q6P1L5	589 aa		10.21	□□□□□ -0.77
NUP85-223	ENST00000583877	MFSD6	Q6ZSS7	791 aa		10.21	□□□□□ -0.77
NUP85-223	ENST00000583877	ALYREF	Q86V81	257 aa	Known RBP	10.21	□□□□□ -0.77
NUP85-223	ENST00000583877	MCF2L2	Q86YR7	1114 aa		10.21	□□□□□ -0.77
NUP85-223	ENST00000583877	NEK9	Q8TD19	979 aa		10.21	□□□□□ -0.77
NUP85-223	ENST00000583877	SP7	Q8TDD2	431 aa	Predicted RBP	10.21	□□□□□ -0.77
NUP85-223	ENST00000583877	SYTL5	Q8TDW5	730 aa	Predicted RBP	10.21	□□□□□ -0.77
NUP85-223	ENST00000583877	TBC1D5	Q92609	795 aa		10.21	□□□□□ -0.77
NUP85-223	ENST00000583877	MRPL38	Q96DV4	380 aa	Known RBP	10.21	□□□□□ -0.77
NUP85-223	ENST00000583877	SAMD11	Q96NU1	681 aa		10.21	□□□□□ -0.77
NUP85-223	ENST00000583877	RMDN3	Q96TC7	470 aa		10.21	□□□□□ -0.77
NUP85-223	ENST00000583877	C17orf80	Q9BSJ5	609 aa		10.21	□□□□□ -0.77
NUP85-223	ENST00000583877	ALG1	Q9BT22	464 aa		10.21	□□□□□ -0.77
NUP85-223	ENST00000583877	COL20A1	Q9P218	1284 aa		10.21	□□□□□ -0.77
NUP85-223	ENST00000583877	PPFIA4	O75335	1185 aa		10.2	□□□□□ -0.78
NUP85-223	ENST00000583877	ZNF286B	P0CG31	522 aa		10.2	□□□□□ -0.78
NUP85-223	ENST00000583877	GOLGA8H	P0CJ92	632 aa		10.2	□□□□□ -0.78
NUP85-223	ENST00000583877	HSPD1	P10809	573 aa	Known RBP	10.2	□□□□□ -0.78
NUP85-223	ENST00000583877	HOXD8	P13378	290 aa	Predicted RBP	10.2	□□□□□ -0.78
NUP85-223	ENST00000583877	CDC37	Q16543	378 aa	Predicted RBP	10.2	□□□□□ -0.78
NUP85-223	ENST00000583877	CSPP1	Q1MSJ5	1256 aa		10.2	□□□□□ -0.78
NUP85-223	ENST00000583877	TIGD5	Q53EQ6	642 aa		10.2	□□□□□ -0.78
NUP85-223	ENST00000583877	ARHGEF16	Q5VV41	709 aa		10.2	□□□□□ -0.78
NUP85-223	ENST00000583877	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	10.2	□□□□□ -0.78
NUP85-223	ENST00000583877	DGKH	Q86XP1	1220 aa		10.2	□□□□□ -0.78
NUP85-223	ENST00000583877	DHX37	Q8IY37	1157 aa	Known RBP	10.2	□□□□□ -0.78
NUP85-223	ENST00000583877	PDCD7	Q8N8D1	485 aa	Known RBP	10.2	□□□□□ -0.78
NUP85-223	ENST00000583877	WNT8B	Q93098	351 aa		10.2	□□□□□ -0.78
NUP85-223	ENST00000583877	FAM227B	Q96M60	508 aa		10.2	□□□□□ -0.78
NUP85-223	ENST00000583877	UBA5	Q9GZZ9	404 aa		10.2	□□□□□ -0.78
NUP85-223	ENST00000583877	KCNH6	Q9H252	994 aa		10.2	□□□□□ -0.78
NUP85-223	ENST00000583877	CPVL	Q9H3G5	476 aa		10.2	□□□□□ -0.78
NUP85-223	ENST00000583877	ZDBF2	Q9HCK1	2354 aa		10.2	□□□□□ -0.78
NUP85-223	ENST00000583877	MRVI1	Q9Y6F6	885 aa		10.2	□□□□□ -0.78
NUP85-223	ENST00000583877	MYO15A	Q9UKN7	3530 aa		10.19	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms