RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.93□□□□□ -1.14
SMARCE1-219ENST00000583294 CBLCQ9ULV8 474 aa7.93□□□□□ -1.14
SMARCE1-219ENST00000583294 YBX2Q9Y2T7 364 aaKnown RBP7.93□□□□□ -1.14
SMARCE1-219ENST00000583294 SIT1Q9Y3P8 196 aa7.93□□□□□ -1.14
SMARCE1-219ENST00000583294 ARID1BQ8NFD5 2236 aaPredicted RBP7.93□□□□□ -1.14
SMARCE1-219ENST00000583294 ZNF503-AS2A6NEH8 195 aa7.92□□□□□ -1.14
SMARCE1-219ENST00000583294 M0R2C6 588 aa7.92□□□□□ -1.14
SMARCE1-219ENST00000583294 GLI4P10075 376 aa7.92□□□□□ -1.14
SMARCE1-219ENST00000583294 ADGRF1Q5T601 910 aa7.92□□□□□ -1.14
SMARCE1-219ENST00000583294 MROH9Q5TGP6 573 aa7.92□□□□□ -1.14
SMARCE1-219ENST00000583294 C16orf59Q7L2K0 433 aa7.92□□□□□ -1.14
SMARCE1-219ENST00000583294 ZSWIM9Q86XI8 627 aa7.92□□□□□ -1.14
SMARCE1-219ENST00000583294 PIP4K2CQ8TBX8 421 aa7.92□□□□□ -1.14
SMARCE1-219ENST00000583294 GPATCH3Q96I76 525 aa7.92□□□□□ -1.14
SMARCE1-219ENST00000583294 MTFR1LQ9H019 292 aa7.92□□□□□ -1.14
SMARCE1-219ENST00000583294 CAAP1Q9H8G2 361 aa7.92□□□□□ -1.14
SMARCE1-219ENST00000583294 ZC3H12DA2A288 527 aaKnown RBP7.91□□□□□ -1.14
SMARCE1-219ENST00000583294 NUDT19A8MXV4 375 aa7.91□□□□□ -1.14
SMARCE1-219ENST00000583294 GSTA4O15217 222 aa7.91□□□□□ -1.14
SMARCE1-219ENST00000583294 KRT15P19012 456 aa7.91□□□□□ -1.14
SMARCE1-219ENST00000583294 PDE6BP35913 854 aa7.91□□□□□ -1.14
SMARCE1-219ENST00000583294 STAT3P40763 770 aa7.91□□□□□ -1.14
SMARCE1-219ENST00000583294 SPIRE1Q08AE8 756 aa7.91□□□□□ -1.14
SMARCE1-219ENST00000583294 KCNMB1Q16558 191 aa7.91□□□□□ -1.14
SMARCE1-219ENST00000583294 PTPROQ16827 1216 aa7.91□□□□□ -1.14
SMARCE1-219ENST00000583294 CT47A1Q5JQC4 288 aaPredicted RBP7.91□□□□□ -1.14
SMARCE1-219ENST00000583294 PKN3Q6P5Z2 889 aa7.91□□□□□ -1.14
SMARCE1-219ENST00000583294 OSTM1Q86WC4 334 aa7.91□□□□□ -1.14
SMARCE1-219ENST00000583294 RIOX2Q8IUF8 465 aa7.91□□□□□ -1.14
SMARCE1-219ENST00000583294 AHI1Q8N157 1196 aa7.91□□□□□ -1.14
SMARCE1-219ENST00000583294 PPM1KQ8N3J5 372 aa7.91□□□□□ -1.14
SMARCE1-219ENST00000583294 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.91□□□□□ -1.14
SMARCE1-219ENST00000583294 CELF4Q9BZC1 486 aaKnown RBP7.91□□□□□ -1.14
SMARCE1-219ENST00000583294 TNFRSF12AQ9NP84 129 aa7.91□□□□□ -1.14
SMARCE1-219ENST00000583294 MAPRE3Q9UPY8 281 aa7.91□□□□□ -1.14
SMARCE1-219ENST00000583294 WNT9AO14904 365 aa7.9□□□□□ -1.14
SMARCE1-219ENST00000583294 NKRFO15226 690 aaKnown RBP eCLIP7.9□□□□□ -1.14
SMARCE1-219ENST00000583294 DBHP09172 617 aa7.9□□□□□ -1.14
SMARCE1-219ENST00000583294 VIL1P09327 827 aaKnown RBP7.9□□□□□ -1.14
SMARCE1-219ENST00000583294 PDE6AP16499 860 aa7.9□□□□□ -1.14
SMARCE1-219ENST00000583294 SOX5P35711 763 aa7.9□□□□□ -1.14
SMARCE1-219ENST00000583294 RBM10P98175 930 aaKnown RBP7.9□□□□□ -1.14
SMARCE1-219ENST00000583294 RAB3GAP1Q15042 981 aa7.9□□□□□ -1.14
SMARCE1-219ENST00000583294 CRY1Q16526 586 aa7.9□□□□□ -1.14
SMARCE1-219ENST00000583294 SKOR2Q2VWA4 1001 aaPredicted RBP7.9□□□□□ -1.14
SMARCE1-219ENST00000583294 TMEM177Q53S58 311 aa7.9□□□□□ -1.14
SMARCE1-219ENST00000583294 OTOP3Q7RTS5 596 aa7.9□□□□□ -1.14
SMARCE1-219ENST00000583294 KRT26Q7Z3Y9 468 aa7.9□□□□□ -1.14
SMARCE1-219ENST00000583294 RNF180Q86T96 592 aa7.9□□□□□ -1.14
SMARCE1-219ENST00000583294 INTS4Q96HW7 963 aaKnown RBP7.9□□□□□ -1.14
SMARCE1-219ENST00000583294 DBR1Q9UK59 544 aaKnown RBP7.9□□□□□ -1.14
SMARCE1-219ENST00000583294 COL4A3BPQ9Y5P4 624 aa7.9□□□□□ -1.14
SMARCE1-219ENST00000583294 LRRC10BA6NIK2 292 aa7.89□□□□□ -1.15
SMARCE1-219ENST00000583294 F8W031 263 aaPredicted RBP7.89□□□□□ -1.15
SMARCE1-219ENST00000583294 KCNK3O14649 394 aa7.89□□□□□ -1.15
SMARCE1-219ENST00000583294 MPOP05164 745 aa7.89□□□□□ -1.15
SMARCE1-219ENST00000583294 POU3F2P20265 443 aaPredicted RBP7.89□□□□□ -1.15
SMARCE1-219ENST00000583294 JAM2P57087 298 aa7.89□□□□□ -1.15
SMARCE1-219ENST00000583294 MESP2Q0VG99 397 aa7.89□□□□□ -1.15
SMARCE1-219ENST00000583294 SEPT7Q16181 437 aaKnown RBP7.89□□□□□ -1.15
SMARCE1-219ENST00000583294 MLANAQ16655 118 aa7.89□□□□□ -1.15
SMARCE1-219ENST00000583294 STEAP3Q658P3 488 aa7.89□□□□□ -1.15
SMARCE1-219ENST00000583294 ARHGAP36Q6ZRI8 547 aa7.89□□□□□ -1.15
SMARCE1-219ENST00000583294 OVCH1Q7RTY7 1134 aa7.89□□□□□ -1.15
SMARCE1-219ENST00000583294 RBM12BQ8IXT5 1001 aaKnown RBP7.89□□□□□ -1.15
SMARCE1-219ENST00000583294 LIN37Q96GY3 246 aaPredicted RBP7.89□□□□□ -1.15
SMARCE1-219ENST00000583294 FAM126AQ9BYI3 521 aaPredicted RBP7.89□□□□□ -1.15
SMARCE1-219ENST00000583294 TMX1Q9H3N1 280 aa7.89□□□□□ -1.15
SMARCE1-219ENST00000583294 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.88□□□□□ -1.15
SMARCE1-219ENST00000583294 NPTXRO95502 500 aa7.88□□□□□ -1.15
SMARCE1-219ENST00000583294 GLI1P08151 1106 aa7.88□□□□□ -1.15
SMARCE1-219ENST00000583294 ERVFRD-1P60508 538 aa7.88□□□□□ -1.15
SMARCE1-219ENST00000583294 DDX46Q7L014 1031 aaKnown RBP7.88□□□□□ -1.15
SMARCE1-219ENST00000583294 STRA8Q7Z7C7 330 aa7.88□□□□□ -1.15
SMARCE1-219ENST00000583294 PTRH1Q86Y79 214 aaKnown RBP7.88□□□□□ -1.15
SMARCE1-219ENST00000583294 NXPE1Q8N323 547 aa7.88□□□□□ -1.15
SMARCE1-219ENST00000583294 C2orf69Q8N8R5 385 aa7.88□□□□□ -1.15
SMARCE1-219ENST00000583294 SLC6A17Q9H1V8 727 aa7.88□□□□□ -1.15
SMARCE1-219ENST00000583294 CABP5Q9NP86 173 aa7.88□□□□□ -1.15
SMARCE1-219ENST00000583294 SLC6A20Q9NP91 592 aa7.88□□□□□ -1.15
SMARCE1-219ENST00000583294 PCDH12Q9NPG4 1184 aa7.88□□□□□ -1.15
SMARCE1-219ENST00000583294 HCFC2Q9Y5Z7 792 aa7.88□□□□□ -1.15
SMARCE1-219ENST00000583294 TCRBV5S4A2TA0A5A2 114 aa7.87□□□□□ -1.15
SMARCE1-219ENST00000583294 CBX4O00257 560 aa7.87□□□□□ -1.15
SMARCE1-219ENST00000583294 TRAF5O00463 557 aa7.87□□□□□ -1.15
SMARCE1-219ENST00000583294 KRIT1O00522 736 aa7.87□□□□□ -1.15
SMARCE1-219ENST00000583294 HGSO14964 777 aaPredicted RBP7.87□□□□□ -1.15
SMARCE1-219ENST00000583294 SLC27A2O14975 620 aa7.87□□□□□ -1.15
SMARCE1-219ENST00000583294 SGSM2O43147 1006 aa7.87□□□□□ -1.15
SMARCE1-219ENST00000583294 SRGAP3O43295 1099 aa7.87□□□□□ -1.15
SMARCE1-219ENST00000583294 AMY2AP04746 511 aa7.87□□□□□ -1.15
SMARCE1-219ENST00000583294 CYBBP04839 570 aa7.87□□□□□ -1.15
SMARCE1-219ENST00000583294 AMY2BP19961 511 aa7.87□□□□□ -1.15
SMARCE1-219ENST00000583294 IBSPP21815 317 aaPredicted RBP7.87□□□□□ -1.15
SMARCE1-219ENST00000583294 NFKB2Q00653 900 aa7.87□□□□□ -1.15
SMARCE1-219ENST00000583294 AMPD3Q01432 767 aa7.87□□□□□ -1.15
SMARCE1-219ENST00000583294 GPR19Q15760 415 aa7.87□□□□□ -1.15
SMARCE1-219ENST00000583294 PAQR3Q6TCH7 311 aa7.87□□□□□ -1.15
SMARCE1-219ENST00000583294 RPTNQ6XPR3 784 aa7.87□□□□□ -1.15
SMARCE1-219ENST00000583294 DCP2Q8IU60 420 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 161.1 ms