RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 EZRP15311 586 aaKnown RBP6.42□□□□□ -1.38
RTTN-209ENST00000583043 OAS2P29728 719 aaKnown RBP6.42□□□□□ -1.38
RTTN-209ENST00000583043 SH3RF1Q7Z6J0 888 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 SRBD1Q8N5C6 995 aaKnown RBP6.42□□□□□ -1.38
RTTN-209ENST00000583043 MYCT1Q8N699 235 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 TRIM9Q9C026 710 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 FEM1BQ9UK73 627 aa6.42□□□□□ -1.38
RTTN-209ENST00000583043 SPDYE4A6NLX3 237 aa6.41□□□□□ -1.38
RTTN-209ENST00000583043 TADA3O75528 432 aa6.41□□□□□ -1.38
RTTN-209ENST00000583043 PLA2G4BP0C869 781 aa6.41□□□□□ -1.38
RTTN-209ENST00000583043 SFNP31947 248 aa6.41□□□□□ -1.38
RTTN-209ENST00000583043 CCDC93Q567U6 631 aa6.41□□□□□ -1.38
RTTN-209ENST00000583043 ENOSF1Q7L5Y1 443 aa6.41□□□□□ -1.38
RTTN-209ENST00000583043 SLC35F6Q8N357 371 aa6.41□□□□□ -1.38
RTTN-209ENST00000583043 RDM1Q8NG50 284 aa6.41□□□□□ -1.38
RTTN-209ENST00000583043 BICD1Q96G01 975 aa6.41□□□□□ -1.38
RTTN-209ENST00000583043 NCAPGQ9BPX3 1015 aa6.41□□□□□ -1.38
RTTN-209ENST00000583043 NHEJ1Q9H9Q4 299 aaPredicted RBP6.41□□□□□ -1.38
RTTN-209ENST00000583043 MTMR4Q9NYA4 1195 aa6.41□□□□□ -1.38
RTTN-209ENST00000583043 VPS18Q9P253 973 aa6.41□□□□□ -1.38
RTTN-209ENST00000583043 ROBO3Q96MS0 1386 aa6.41□□□□□ -1.38
RTTN-209ENST00000583043 RIMBP2O15034 1052 aa6.41□□□□□ -1.38
RTTN-209ENST00000583043 GGPS1O95749 300 aa6.41□□□□□ -1.38
RTTN-209ENST00000583043 GAS8O95995 478 aa6.41□□□□□ -1.38
RTTN-209ENST00000583043 RHOXF2BP0C7M4 288 aa6.41□□□□□ -1.38
RTTN-209ENST00000583043 STRN3Q13033 797 aa6.41□□□□□ -1.38
RTTN-209ENST00000583043 ZNF827Q17R98 1081 aa6.41□□□□□ -1.38
RTTN-209ENST00000583043 HSP90AA4PQ58FG1 418 aa6.41□□□□□ -1.38
RTTN-209ENST00000583043 E4F1Q66K89 784 aaPredicted RBP6.41□□□□□ -1.38
RTTN-209ENST00000583043 INTS8Q75QN2 995 aaKnown RBP6.41□□□□□ -1.38
RTTN-209ENST00000583043 FAM178BQ8IXR5 827 aa6.41□□□□□ -1.38
RTTN-209ENST00000583043 SH3RF3Q8TEJ3 882 aaPredicted RBP6.41□□□□□ -1.38
RTTN-209ENST00000583043 RHOXF2Q9BQY4 288 aa6.41□□□□□ -1.38
RTTN-209ENST00000583043 EIF3DO15371 548 aaKnown RBP eCLIP6.41□□□□□ -1.38
RTTN-209ENST00000583043 PRDX5P30044 214 aa6.41□□□□□ -1.38
RTTN-209ENST00000583043 ZNF543Q08ER8 600 aa6.41□□□□□ -1.38
RTTN-209ENST00000583043 DYDC1Q8WWB3 177 aa6.41□□□□□ -1.38
RTTN-209ENST00000583043 CNOT10Q9H9A5 744 aaKnown RBP6.41□□□□□ -1.38
RTTN-209ENST00000583043 PICK1Q9NRD5 415 aa6.41□□□□□ -1.38
RTTN-209ENST00000583043 STXBP3O00186 592 aa6.41□□□□□ -1.38
RTTN-209ENST00000583043 MATR3P43243 847 aaKnown RBP eCLIP6.41□□□□□ -1.38
RTTN-209ENST00000583043 MFAP3P55082 362 aa6.41□□□□□ -1.38
RTTN-209ENST00000583043 PABPC4Q13310 644 aaKnown RBP eCLIP6.41□□□□□ -1.38
RTTN-209ENST00000583043 TKFCQ3LXA3 575 aa6.41□□□□□ -1.38
RTTN-209ENST00000583043 GJD4Q96KN9 370 aaPredicted RBP6.41□□□□□ -1.38
RTTN-209ENST00000583043 DNAJC7Q99615 494 aa6.41□□□□□ -1.38
RTTN-209ENST00000583043 KBTBD4Q9NVX7 518 aa6.41□□□□□ -1.38
RTTN-209ENST00000583043 F8W031 263 aaPredicted RBP6.41□□□□□ -1.38
RTTN-209ENST00000583043 GCNT3O95395 438 aa6.41□□□□□ -1.38
RTTN-209ENST00000583043 ASNSP08243 561 aa6.41□□□□□ -1.38
RTTN-209ENST00000583043 TYW1BQ6NUM6 668 aa6.41□□□□□ -1.38
RTTN-209ENST00000583043 LARGE2Q8N3Y3 721 aa6.41□□□□□ -1.38
RTTN-209ENST00000583043 PARVGQ9HBI0 331 aa6.41□□□□□ -1.38
RTTN-209ENST00000583043 DISP2A7MBM2 1401 aa6.4□□□□□ -1.38
RTTN-209ENST00000583043 RASA1P20936 1047 aa6.4□□□□□ -1.38
RTTN-209ENST00000583043 NR2F2P24468 414 aa6.4□□□□□ -1.38
RTTN-209ENST00000583043 CLCN6P51797 869 aa6.4□□□□□ -1.38
RTTN-209ENST00000583043 STAT2P52630 851 aa6.4□□□□□ -1.38
RTTN-209ENST00000583043 NFIXQ14938 502 aa6.4□□□□□ -1.38
RTTN-209ENST00000583043 TC2NQ8N9U0 490 aa6.4□□□□□ -1.38
RTTN-209ENST00000583043 PPM1EQ8WY54 764 aa6.4□□□□□ -1.38
RTTN-209ENST00000583043 P3H4Q92791 437 aa6.4□□□□□ -1.38
RTTN-209ENST00000583043 FNBP1Q96RU3 617 aa6.4□□□□□ -1.38
RTTN-209ENST00000583043 ZSWIM4Q9H7M6 989 aa6.4□□□□□ -1.38
RTTN-209ENST00000583043 SERPINA10Q9UK55 444 aa6.4□□□□□ -1.38
RTTN-209ENST00000583043 KIAA1024Q9UPX6 916 aa6.4□□□□□ -1.38
RTTN-209ENST00000583043 CCDC169A6NNP5 214 aa6.4□□□□□ -1.38
RTTN-209ENST00000583043 PGRMC1O00264 195 aaKnown RBP6.4□□□□□ -1.38
RTTN-209ENST00000583043 AP3M2P53677 418 aa6.4□□□□□ -1.38
RTTN-209ENST00000583043 EIF6P56537 245 aaKnown RBP6.4□□□□□ -1.38
RTTN-209ENST00000583043 MAP2K1Q02750 393 aaPredicted RBP6.4□□□□□ -1.38
RTTN-209ENST00000583043 ITPK1Q13572 414 aa6.4□□□□□ -1.38
RTTN-209ENST00000583043 NCAPHQ15003 741 aa6.4□□□□□ -1.38
RTTN-209ENST00000583043 DCAF17Q5H9S7 520 aaPredicted RBP6.4□□□□□ -1.38
RTTN-209ENST00000583043 DYMQ7RTS9 669 aa6.4□□□□□ -1.38
RTTN-209ENST00000583043 OXER1Q8TDS5 423 aa6.4□□□□□ -1.38
RTTN-209ENST00000583043 FAM207AQ9NSI2 230 aaPredicted RBP6.4□□□□□ -1.38
RTTN-209ENST00000583043 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.4□□□□□ -1.38
RTTN-209ENST00000583043 PCDHA13Q9Y5I0 950 aa6.4□□□□□ -1.38
RTTN-209ENST00000583043 FLT1P17948 1338 aa6.4□□□□□ -1.38
RTTN-209ENST00000583043 GSTTP1A0A1W2PQM5 241 aa6.4□□□□□ -1.38
RTTN-209ENST00000583043 TMEM232C9JQI7 657 aa6.4□□□□□ -1.38
RTTN-209ENST00000583043 PPIP5K2O43314 1243 aa6.4□□□□□ -1.38
RTTN-209ENST00000583043 EYA4O95677 639 aa6.4□□□□□ -1.38
RTTN-209ENST00000583043 PRCPP42785 496 aa6.4□□□□□ -1.38
RTTN-209ENST00000583043 KIF11P52732 1056 aa6.4□□□□□ -1.38
RTTN-209ENST00000583043 CUL4BQ13620 913 aa6.4□□□□□ -1.38
RTTN-209ENST00000583043 RASA3Q14644 834 aa6.4□□□□□ -1.38
RTTN-209ENST00000583043 PRR16Q569H4 304 aa6.4□□□□□ -1.38
RTTN-209ENST00000583043 CC2D1AQ6P1N0 951 aaPredicted RBP6.4□□□□□ -1.38
RTTN-209ENST00000583043 TTC39CQ8N584 583 aa6.4□□□□□ -1.38
RTTN-209ENST00000583043 EIF1ADQ8N9N8 165 aaKnown RBP6.4□□□□□ -1.38
RTTN-209ENST00000583043 DHX38Q92620 1227 aaKnown RBP6.4□□□□□ -1.38
RTTN-209ENST00000583043 POLR3CQ9BUI4 534 aaPredicted RBP6.4□□□□□ -1.38
RTTN-209ENST00000583043 ZMYND15Q9H091 742 aa6.4□□□□□ -1.38
RTTN-209ENST00000583043 IFT122Q9HBG6 1241 aa6.4□□□□□ -1.38
RTTN-209ENST00000583043 PNMA6AP0CW24 399 aaPredicted RBP6.4□□□□□ -1.39
RTTN-209ENST00000583043 KRT76Q01546 638 aa6.4□□□□□ -1.39
RTTN-209ENST00000583043 TBX2Q13207 712 aaPredicted RBP6.4□□□□□ -1.39
RTTN-209ENST00000583043 EPHA7Q15375 998 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms