RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 TRIM9Q9C026 710 aa11.59□□□□□ -0.55
TOP3A-214ENST00000582981 EPN3Q9H201 632 aa11.59□□□□□ -0.55
TOP3A-214ENST00000582981 LRRC53A6NM62 1247 aa11.59□□□□□ -0.55
TOP3A-214ENST00000582981 BUB1BO60566 1050 aaPredicted RBP11.59□□□□□ -0.55
TOP3A-214ENST00000582981 SSR1P43307 286 aaKnown RBP11.59□□□□□ -0.55
TOP3A-214ENST00000582981 MYO1EQ12965 1108 aa11.59□□□□□ -0.55
TOP3A-214ENST00000582981 SPA17Q15506 151 aa11.59□□□□□ -0.55
TOP3A-214ENST00000582981 FAM228AQ86W67 206 aa11.59□□□□□ -0.55
TOP3A-214ENST00000582981 SPATS2Q86XZ4 545 aaKnown RBP11.59□□□□□ -0.55
TOP3A-214ENST00000582981 FUKQ8N0W3 1084 aa11.59□□□□□ -0.55
TOP3A-214ENST00000582981 SEMA6BQ9H3T3 888 aa11.59□□□□□ -0.55
TOP3A-214ENST00000582981 MYO1AQ9UBC5 1043 aa11.59□□□□□ -0.55
TOP3A-214ENST00000582981 MAD2L2Q9UI95 211 aa11.59□□□□□ -0.55
TOP3A-214ENST00000582981 TARSL2A2RTX5 802 aaKnown RBP11.58□□□□□ -0.56
TOP3A-214ENST00000582981 KLRF2D3W0D1 207 aa11.58□□□□□ -0.56
TOP3A-214ENST00000582981 TDP2O95551 362 aa11.58□□□□□ -0.56
TOP3A-214ENST00000582981 SRGNP10124 158 aa11.58□□□□□ -0.56
TOP3A-214ENST00000582981 DNM2P50570 870 aa11.58□□□□□ -0.56
TOP3A-214ENST00000582981 KCNB1Q14721 858 aa11.58□□□□□ -0.56
TOP3A-214ENST00000582981 MIIPQ5JXC2 388 aa11.58□□□□□ -0.56
TOP3A-214ENST00000582981 NLRP14Q86W24 1093 aa11.58□□□□□ -0.56
TOP3A-214ENST00000582981 DUOX1Q9NRD9 1551 aa11.58□□□□□ -0.56
TOP3A-214ENST00000582981 ZNF804BA4D1E1 1349 aa11.58□□□□□ -0.56
TOP3A-214ENST00000582981 KLHL33A6NCF5 533 aa11.58□□□□□ -0.56
TOP3A-214ENST00000582981 CAND2O75155 1236 aa11.58□□□□□ -0.56
TOP3A-214ENST00000582981 RTN2O75298 545 aa11.58□□□□□ -0.56
TOP3A-214ENST00000582981 FECHP22830 423 aa11.58□□□□□ -0.56
TOP3A-214ENST00000582981 KIF5BP33176 963 aa11.58□□□□□ -0.56
TOP3A-214ENST00000582981 SLC1A4P43007 532 aa11.58□□□□□ -0.56
TOP3A-214ENST00000582981 DDB1Q16531 1140 aa11.58□□□□□ -0.56
TOP3A-214ENST00000582981 CCDC181Q5TID7 509 aa11.58□□□□□ -0.56
TOP3A-214ENST00000582981 KCNK18Q7Z418 384 aa11.58□□□□□ -0.56
TOP3A-214ENST00000582981 GIMAP8Q8ND71 665 aaPredicted RBP11.58□□□□□ -0.56
TOP3A-214ENST00000582981 MYCBPAPQ8TBZ2 947 aa11.58□□□□□ -0.56
TOP3A-214ENST00000582981 TBCKQ8TEA7 893 aa11.58□□□□□ -0.56
TOP3A-214ENST00000582981 PIGSQ96S52 555 aa11.58□□□□□ -0.56
TOP3A-214ENST00000582981 TMEM47Q9BQJ4 181 aa11.58□□□□□ -0.56
TOP3A-214ENST00000582981 TCP11L1Q9NUJ3 509 aa11.58□□□□□ -0.56
TOP3A-214ENST00000582981 ANKIB1Q9P2G1 1089 aa11.58□□□□□ -0.56
TOP3A-214ENST00000582981 SH3BP1Q9Y3L3 701 aa11.58□□□□□ -0.56
TOP3A-214ENST00000582981 DCCP43146 1447 aa11.58□□□□□ -0.56
TOP3A-214ENST00000582981 SHANK3Q9BYB0 1731 aa11.58□□□□□ -0.56
TOP3A-214ENST00000582981 SMCO2A6NFE2 343 aa11.58□□□□□ -0.56
TOP3A-214ENST00000582981 PPP1R37O75864 691 aa11.58□□□□□ -0.56
TOP3A-214ENST00000582981 KIF11P52732 1056 aa11.58□□□□□ -0.56
TOP3A-214ENST00000582981 TRIM14Q14142 442 aa11.58□□□□□ -0.56
TOP3A-214ENST00000582981 SPRED3Q2MJR0 410 aa11.58□□□□□ -0.56
TOP3A-214ENST00000582981 LRRC47Q8N1G4 583 aaKnown RBP11.58□□□□□ -0.56
TOP3A-214ENST00000582981 ZIM3Q96PE6 472 aa11.58□□□□□ -0.56
TOP3A-214ENST00000582981 SH3GL3Q99963 347 aa11.58□□□□□ -0.56
TOP3A-214ENST00000582981 FGFBP2Q9BYJ0 223 aa11.58□□□□□ -0.56
TOP3A-214ENST00000582981 KRT83P78385 493 aa11.57□□□□□ -0.56
TOP3A-214ENST00000582981 ZNF444Q8N0Y2 327 aaPredicted RBP11.57□□□□□ -0.56
TOP3A-214ENST00000582981 MARCH10Q8NA82 808 aaPredicted RBP11.57□□□□□ -0.56
TOP3A-214ENST00000582981 AENQ8WTP8 325 aaKnown RBP11.57□□□□□ -0.56
TOP3A-214ENST00000582981 MTMR8Q96EF0 704 aa11.57□□□□□ -0.56
TOP3A-214ENST00000582981 CCDC43Q96MW1 224 aaKnown RBP11.57□□□□□ -0.56
TOP3A-214ENST00000582981 TTYH3Q9C0H2 523 aa11.57□□□□□ -0.56
TOP3A-214ENST00000582981 YIPF3Q9GZM5 350 aa11.57□□□□□ -0.56
TOP3A-214ENST00000582981 RBM12Q9NTZ6 932 aaKnown RBP11.57□□□□□ -0.56
TOP3A-214ENST00000582981 MYMKA6NI61 221 aa11.57□□□□□ -0.56
TOP3A-214ENST00000582981 F8W031 263 aaPredicted RBP11.57□□□□□ -0.56
TOP3A-214ENST00000582981 STXBP3O00186 592 aa11.57□□□□□ -0.56
TOP3A-214ENST00000582981 NR1D1P20393 614 aa11.57□□□□□ -0.56
TOP3A-214ENST00000582981 CCNE1P24864 410 aa11.57□□□□□ -0.56
TOP3A-214ENST00000582981 CALML3P27482 149 aa11.57□□□□□ -0.56
TOP3A-214ENST00000582981 RPS8P62241 208 aaKnown RBP11.57□□□□□ -0.56
TOP3A-214ENST00000582981 UBE4AQ14139 1066 aa11.57□□□□□ -0.56
TOP3A-214ENST00000582981 UBE2SQ16763 222 aa11.57□□□□□ -0.56
TOP3A-214ENST00000582981 AMIGO3Q86WK7 504 aa11.57□□□□□ -0.56
TOP3A-214ENST00000582981 CREG2Q8IUH2 290 aa11.57□□□□□ -0.56
TOP3A-214ENST00000582981 NSMCE1Q8WV22 266 aa11.57□□□□□ -0.56
TOP3A-214ENST00000582981 KBTBD4Q9NVX7 518 aa11.57□□□□□ -0.56
TOP3A-214ENST00000582981 SLC37A4O43826 429 aa11.56□□□□□ -0.56
TOP3A-214ENST00000582981 RHOBTB3O94955 611 aa11.56□□□□□ -0.56
TOP3A-214ENST00000582981 KIF4AO95239 1232 aa11.56□□□□□ -0.56
TOP3A-214ENST00000582981 OR52Z1P0C646 297 aa11.56□□□□□ -0.56
TOP3A-214ENST00000582981 FAM153BP0C7A2 387 aa11.56□□□□□ -0.56
TOP3A-214ENST00000582981 MYBL1P10243 752 aa11.56□□□□□ -0.56
TOP3A-214ENST00000582981 EEF1GP26641 437 aaKnown RBP11.56□□□□□ -0.56
TOP3A-214ENST00000582981 TNNI2P48788 182 aa11.56□□□□□ -0.56
TOP3A-214ENST00000582981 NFIXQ14938 502 aa11.56□□□□□ -0.56
TOP3A-214ENST00000582981 PTGISQ16647 500 aa11.56□□□□□ -0.56
TOP3A-214ENST00000582981 FAM153CQ494X1 144 aa11.56□□□□□ -0.56
TOP3A-214ENST00000582981 PARP10Q53GL7 1025 aa11.56□□□□□ -0.56
TOP3A-214ENST00000582981 CFAP58Q5T655 872 aa11.56□□□□□ -0.56
TOP3A-214ENST00000582981 MSL1Q68DK7 614 aa11.56□□□□□ -0.56
TOP3A-214ENST00000582981 CACNA2D4Q7Z3S7 1137 aa11.56□□□□□ -0.56
TOP3A-214ENST00000582981 MAATS1Q7Z4T9 603 aa11.56□□□□□ -0.56
TOP3A-214ENST00000582981 PNMA8AQ86V59 439 aaPredicted RBP11.56□□□□□ -0.56
TOP3A-214ENST00000582981 SPDYE1Q8NFV5 336 aaPredicted RBP11.56□□□□□ -0.56
TOP3A-214ENST00000582981 LMBR1Q8WVP7 490 aa11.56□□□□□ -0.56
TOP3A-214ENST00000582981 SAAL1Q96ER3 474 aa11.56□□□□□ -0.56
TOP3A-214ENST00000582981 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.56□□□□□ -0.56
TOP3A-214ENST00000582981 ETAA1Q9NY74 926 aa11.56□□□□□ -0.56
TOP3A-214ENST00000582981 FAM153AQ9UHL3 310 aa11.56□□□□□ -0.56
TOP3A-214ENST00000582981 PCDHA13Q9Y5I0 950 aa11.56□□□□□ -0.56
TOP3A-214ENST00000582981 FLT1P17948 1338 aa11.56□□□□□ -0.56
TOP3A-214ENST00000582981 NPHP3-ACAD11A0A0J9YXS1 232 aa11.56□□□□□ -0.56
TOP3A-214ENST00000582981 DNM1LO00429 736 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms