RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 HSPA8P11142 646 aaKnown RBP16.4■□□□□ 0.22
MKS1-211ENST00000581761 ATP1A3P13637 1013 aa16.4■□□□□ 0.22
MKS1-211ENST00000581761 GJA5P36382 358 aa16.4■□□□□ 0.22
MKS1-211ENST00000581761 HSD17B4P51659 736 aa16.4■□□□□ 0.22
MKS1-211ENST00000581761 ASIC1P78348 528 aa16.4■□□□□ 0.22
MKS1-211ENST00000581761 VGLL4Q14135 290 aa16.4■□□□□ 0.22
MKS1-211ENST00000581761 MCM6Q14566 821 aa16.4■□□□□ 0.22
MKS1-211ENST00000581761 ANKRD13AQ8IZ07 590 aa16.4■□□□□ 0.22
MKS1-211ENST00000581761 CNKSR2Q8WXI2 1034 aa16.4■□□□□ 0.22
MKS1-211ENST00000581761 CLEC4DQ8WXI8 215 aa16.4■□□□□ 0.22
MKS1-211ENST00000581761 LENG9Q96B70 501 aa16.4■□□□□ 0.22
MKS1-211ENST00000581761 ATG4CQ96DT6 458 aa16.4■□□□□ 0.22
MKS1-211ENST00000581761 FAM20AQ96MK3 541 aa16.4■□□□□ 0.22
MKS1-211ENST00000581761 ZNF830Q96NB3 372 aaPredicted RBP16.4■□□□□ 0.22
MKS1-211ENST00000581761 XPO4Q9C0E2 1151 aaKnown RBP16.4■□□□□ 0.22
MKS1-211ENST00000581761 BLOC1S4Q9NUP1 217 aa16.4■□□□□ 0.22
MKS1-211ENST00000581761 NFE2L3Q9Y4A8 694 aa16.4■□□□□ 0.22
MKS1-211ENST00000581761 UNCXA6NJT0 531 aa16.39■□□□□ 0.21
MKS1-211ENST00000581761 NFIBO00712 420 aa16.39■□□□□ 0.21
MKS1-211ENST00000581761 MSH4O15457 936 aa16.39■□□□□ 0.21
MKS1-211ENST00000581761 PTGS1P23219 599 aa16.39■□□□□ 0.21
MKS1-211ENST00000581761 STAT3P40763 770 aa16.39■□□□□ 0.21
MKS1-211ENST00000581761 STX17P56962 302 aa16.39■□□□□ 0.21
MKS1-211ENST00000581761 UBXN2AP68543 259 aa16.39■□□□□ 0.21
MKS1-211ENST00000581761 MKRN3Q13064 507 aaKnown RBP16.39■□□□□ 0.21
MKS1-211ENST00000581761 SEMA3FQ13275 785 aa16.39■□□□□ 0.21
MKS1-211ENST00000581761 SPRYD7Q5W111 196 aa16.39■□□□□ 0.21
MKS1-211ENST00000581761 NCAPH2Q6IBW4 605 aa16.39■□□□□ 0.21
MKS1-211ENST00000581761 CCDC186Q7Z3E2 898 aa16.39■□□□□ 0.21
MKS1-211ENST00000581761 ERMNQ8TAM6 284 aa16.39■□□□□ 0.21
MKS1-211ENST00000581761 LARP4BQ92615 738 aaKnown RBP16.39■□□□□ 0.21
MKS1-211ENST00000581761 SLC10A4Q96EP9 437 aa16.39■□□□□ 0.21
MKS1-211ENST00000581761 TRIM9Q9C026 710 aa16.39■□□□□ 0.21
MKS1-211ENST00000581761 LRRC27Q9C0I9 530 aa16.39■□□□□ 0.21
MKS1-211ENST00000581761 ELP3Q9H9T3 547 aa16.39■□□□□ 0.21
MKS1-211ENST00000581761 RTN4Q9NQC3 1192 aaKnown RBP16.39■□□□□ 0.21
MKS1-211ENST00000581761 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.39■□□□□ 0.21
MKS1-211ENST00000581761 TSKSQ9UJT2 592 aa16.39■□□□□ 0.21
MKS1-211ENST00000581761 GDAQ9Y2T3 454 aa16.39■□□□□ 0.21
MKS1-211ENST00000581761 STK24Q9Y6E0 443 aa16.39■□□□□ 0.21
MKS1-211ENST00000581761 SNCAIPQ9Y6H5 919 aa16.39■□□□□ 0.21
MKS1-211ENST00000581761 PHIPQ8WWQ0 1821 aa16.39■□□□□ 0.21
MKS1-211ENST00000581761 VWA5AO00534 786 aa16.38■□□□□ 0.21
MKS1-211ENST00000581761 SERPINC1P01008 464 aa16.38■□□□□ 0.21
MKS1-211ENST00000581761 CDK11BP21127 795 aaKnown RBP16.38■□□□□ 0.21
MKS1-211ENST00000581761 DSG3P32926 999 aa16.38■□□□□ 0.21
MKS1-211ENST00000581761 PAK1Q13153 545 aa16.38■□□□□ 0.21
MKS1-211ENST00000581761 HYIQ5T013 277 aa16.38■□□□□ 0.21
MKS1-211ENST00000581761 SPATA1Q5VX52 437 aa16.38■□□□□ 0.21
MKS1-211ENST00000581761 MED15Q96RN5 788 aa16.38■□□□□ 0.21
MKS1-211ENST00000581761 NT5C3AQ9H0P0 336 aa16.38■□□□□ 0.21
MKS1-211ENST00000581761 HOMER2Q9NSB8 354 aa16.38■□□□□ 0.21
MKS1-211ENST00000581761 EXOC1Q9NV70 894 aa16.38■□□□□ 0.21
MKS1-211ENST00000581761 NRBP1Q9UHY1 535 aa16.38■□□□□ 0.21
MKS1-211ENST00000581761 RABGAP1Q9Y3P9 1069 aa16.38■□□□□ 0.21
MKS1-211ENST00000581761 AFG3L2Q9Y4W6 797 aa16.38■□□□□ 0.21
MKS1-211ENST00000581761 CSADQ9Y600 493 aa16.38■□□□□ 0.21
MKS1-211ENST00000581761 OTOFQ9HC10 1997 aa16.38■□□□□ 0.21
MKS1-211ENST00000581761 IGLV3-22A0A075B6J6 115 aa16.37■□□□□ 0.21
MKS1-211ENST00000581761 RHOBTB3O94955 611 aa16.37■□□□□ 0.21
MKS1-211ENST00000581761 UBASH3AP57075 661 aa16.37■□□□□ 0.21
MKS1-211ENST00000581761 GHRHRQ02643 423 aa16.37■□□□□ 0.21
MKS1-211ENST00000581761 PDE4DQ08499 809 aa16.37■□□□□ 0.21
MKS1-211ENST00000581761 STIM1Q13586 685 aa16.37■□□□□ 0.21
MKS1-211ENST00000581761 ECM1Q16610 540 aa16.37■□□□□ 0.21
MKS1-211ENST00000581761 TPD52L1Q16890 204 aaPredicted RBP16.37■□□□□ 0.21
MKS1-211ENST00000581761 MUM1L1Q5H9M0 696 aa16.37■□□□□ 0.21
MKS1-211ENST00000581761 HAUS3Q68CZ6 603 aa16.37■□□□□ 0.21
MKS1-211ENST00000581761 SAMD3Q8N6K7 520 aa16.37■□□□□ 0.21
MKS1-211ENST00000581761 CYP2W1Q8TAV3 490 aa16.37■□□□□ 0.21
MKS1-211ENST00000581761 NELFBQ8WX92 580 aa16.37■□□□□ 0.21
MKS1-211ENST00000581761 WNK4Q96J92 1243 aa16.37■□□□□ 0.21
MKS1-211ENST00000581761 TRERF1Q96PN7 1200 aa16.37■□□□□ 0.21
MKS1-211ENST00000581761 GTPBP4Q9BZE4 634 aaKnown RBP16.37■□□□□ 0.21
MKS1-211ENST00000581761 RPTORQ8N122 1335 aa16.37■□□□□ 0.21
MKS1-211ENST00000581761 POTEB3A0JP26 581 aa16.36■□□□□ 0.21
MKS1-211ENST00000581761 MYMKA6NI61 221 aa16.36■□□□□ 0.21
MKS1-211ENST00000581761 CA12O43570 354 aa16.36■□□□□ 0.21
MKS1-211ENST00000581761 ZNF18P17022 549 aa16.36■□□□□ 0.21
MKS1-211ENST00000581761 SPIRE1Q08AE8 756 aa16.36■□□□□ 0.21
MKS1-211ENST00000581761 COG2Q14746 738 aa16.36■□□□□ 0.21
MKS1-211ENST00000581761 CCDC144BQ3MJ40 725 aa16.36■□□□□ 0.21
MKS1-211ENST00000581761 CEP55Q53EZ4 464 aa16.36■□□□□ 0.21
MKS1-211ENST00000581761 HSP90AA4PQ58FG1 418 aa16.36■□□□□ 0.21
MKS1-211ENST00000581761 SH3D19Q5HYK7 790 aa16.36■□□□□ 0.21
MKS1-211ENST00000581761 POTEBQ6S5H4 581 aa16.36■□□□□ 0.21
MKS1-211ENST00000581761 CATSPERGQ6ZRH7 1159 aa16.36■□□□□ 0.21
MKS1-211ENST00000581761 TMC6Q7Z403 805 aa16.36■□□□□ 0.21
MKS1-211ENST00000581761 KCNK18Q7Z418 384 aa16.36■□□□□ 0.21
MKS1-211ENST00000581761 ADSSL1Q8N142 457 aa16.36■□□□□ 0.21
MKS1-211ENST00000581761 REPS2Q8NFH8 660 aa16.36■□□□□ 0.21
MKS1-211ENST00000581761 SYTL5Q8TDW5 730 aaPredicted RBP16.36■□□□□ 0.21
MKS1-211ENST00000581761 OPTNQ96CV9 577 aa16.36■□□□□ 0.21
MKS1-211ENST00000581761 KCNF1Q9H3M0 494 aa16.36■□□□□ 0.21
MKS1-211ENST00000581761 SAMSN1Q9NSI8 373 aaKnown RBP16.36■□□□□ 0.21
MKS1-211ENST00000581761 RNF146Q9NTX7 359 aa16.36■□□□□ 0.21
MKS1-211ENST00000581761 COL20A1Q9P218 1284 aa16.36■□□□□ 0.21
MKS1-211ENST00000581761 RWDD2AQ9UIY3 292 aa16.36■□□□□ 0.21
MKS1-211ENST00000581761 VAV3Q9UKW4 847 aa16.36■□□□□ 0.21
MKS1-211ENST00000581761 KIAA1024Q9UPX6 916 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms