RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 PCDHB15Q9Y5E8 787 aa11.6□□□□□ -0.55
RFFL-208ENST00000581039 A0A0D9SFI3 127 aa11.59□□□□□ -0.55
RFFL-208ENST00000581039 H3BQ06 376 aaPredicted RBP11.59□□□□□ -0.55
RFFL-208ENST00000581039 CFBP00751 764 aa11.59□□□□□ -0.55
RFFL-208ENST00000581039 HTRA4P83105 476 aaPredicted RBP11.59□□□□□ -0.55
RFFL-208ENST00000581039 EPC2Q52LR7 807 aa11.59□□□□□ -0.55
RFFL-208ENST00000581039 TIGD5Q53EQ6 642 aa11.59□□□□□ -0.55
RFFL-208ENST00000581039 ANKRD45Q5TZF3 282 aa11.59□□□□□ -0.55
RFFL-208ENST00000581039 DIEXFQ68CQ4 756 aaKnown RBP11.59□□□□□ -0.55
RFFL-208ENST00000581039 KCNV1Q6PIU1 500 aa11.59□□□□□ -0.55
RFFL-208ENST00000581039 IQCA1Q86XH1 822 aa11.59□□□□□ -0.55
RFFL-208ENST00000581039 FBXO11Q86XK2 927 aa11.59□□□□□ -0.55
RFFL-208ENST00000581039 TICAM2Q86XR7 235 aa11.59□□□□□ -0.55
RFFL-208ENST00000581039 PNMA1Q8ND90 353 aa11.59□□□□□ -0.55
RFFL-208ENST00000581039 BANK1Q8NDB2 785 aa11.59□□□□□ -0.55
RFFL-208ENST00000581039 NEK9Q8TD19 979 aa11.59□□□□□ -0.55
RFFL-208ENST00000581039 WNT8BQ93098 351 aa11.59□□□□□ -0.55
RFFL-208ENST00000581039 SAMD11Q96NU1 681 aa11.59□□□□□ -0.55
RFFL-208ENST00000581039 KAT14Q9H8E8 782 aa11.59□□□□□ -0.55
RFFL-208ENST00000581039 VAT1LQ9HCJ6 419 aa11.59□□□□□ -0.55
RFFL-208ENST00000581039 PXMP2Q9NR77 195 aa11.59□□□□□ -0.55
RFFL-208ENST00000581039 ZMYM6O95789 1325 aa11.59□□□□□ -0.55
RFFL-208ENST00000581039 H3BNC9 293 aa11.58□□□□□ -0.56
RFFL-208ENST00000581039 ZNF213O14771 459 aa11.58□□□□□ -0.56
RFFL-208ENST00000581039 DCXO43602 365 aa11.58□□□□□ -0.56
RFFL-208ENST00000581039 MYCLP12524 364 aaPredicted RBP11.58□□□□□ -0.56
RFFL-208ENST00000581039 GPM6BQ13491 265 aa11.58□□□□□ -0.56
RFFL-208ENST00000581039 QRICH1Q2TAL8 776 aa11.58□□□□□ -0.56
RFFL-208ENST00000581039 PLEKHG4Q58EX7 1191 aa11.58□□□□□ -0.56
RFFL-208ENST00000581039 CELF3Q5SZQ8 465 aaKnown RBP11.58□□□□□ -0.56
RFFL-208ENST00000581039 MYSM1Q5VVJ2 828 aa11.58□□□□□ -0.56
RFFL-208ENST00000581039 SERINC5Q86VE9 423 aa11.58□□□□□ -0.56
RFFL-208ENST00000581039 TBC1D10CQ8IV04 446 aa11.58□□□□□ -0.56
RFFL-208ENST00000581039 SP7Q8TDD2 431 aaPredicted RBP11.58□□□□□ -0.56
RFFL-208ENST00000581039 SEPT8Q92599 483 aa11.58□□□□□ -0.56
RFFL-208ENST00000581039 SPATA33Q96N06 139 aa11.58□□□□□ -0.56
RFFL-208ENST00000581039 YME1L1Q96TA2 773 aa11.58□□□□□ -0.56
RFFL-208ENST00000581039 SALL3Q9BXA9 1300 aa11.58□□□□□ -0.56
RFFL-208ENST00000581039 COL4A4P53420 1690 aaPredicted RBP11.57□□□□□ -0.56
RFFL-208ENST00000581039 C17orf102A2RUQ5 167 aa11.57□□□□□ -0.56
RFFL-208ENST00000581039 SORBS3O60504 671 aa11.57□□□□□ -0.56
RFFL-208ENST00000581039 UPP2O95045 317 aa11.57□□□□□ -0.56
RFFL-208ENST00000581039 PARP1P09874 1014 aaKnown RBP11.57□□□□□ -0.56
RFFL-208ENST00000581039 HOXD8P13378 290 aaPredicted RBP11.57□□□□□ -0.56
RFFL-208ENST00000581039 NT5C2P49902 561 aa11.57□□□□□ -0.56
RFFL-208ENST00000581039 PDE1AP54750 535 aa11.57□□□□□ -0.56
RFFL-208ENST00000581039 MFAP1P55081 439 aaKnown RBP11.57□□□□□ -0.56
RFFL-208ENST00000581039 NMIQ13287 307 aaPredicted RBP11.57□□□□□ -0.56
RFFL-208ENST00000581039 HIC1Q14526 733 aa11.57□□□□□ -0.56
RFFL-208ENST00000581039 ASPRV1Q53RT3 343 aa11.57□□□□□ -0.56
RFFL-208ENST00000581039 TCEAL5Q5H9L2 206 aa11.57□□□□□ -0.56
RFFL-208ENST00000581039 ZNF589Q86UQ0 364 aaPredicted RBP11.57□□□□□ -0.56
RFFL-208ENST00000581039 TMEM192Q8IY95 271 aa11.57□□□□□ -0.56
RFFL-208ENST00000581039 ANKS1AQ92625 1134 aa11.57□□□□□ -0.56
RFFL-208ENST00000581039 ATP6V0A1Q93050 837 aa11.57□□□□□ -0.56
RFFL-208ENST00000581039 TOP1MTQ969P6 601 aa11.57□□□□□ -0.56
RFFL-208ENST00000581039 PABPC5Q96DU9 382 aaKnown RBP11.57□□□□□ -0.56
RFFL-208ENST00000581039 AMNQ9BXJ7 453 aa11.57□□□□□ -0.56
RFFL-208ENST00000581039 NSUN3Q9H649 340 aaKnown RBP11.57□□□□□ -0.56
RFFL-208ENST00000581039 JMJD4Q9H9V9 463 aa11.57□□□□□ -0.56
RFFL-208ENST00000581039 MLXIPQ9HAP2 919 aa11.57□□□□□ -0.56
RFFL-208ENST00000581039 PRKAG3Q9UGI9 489 aa11.57□□□□□ -0.56
RFFL-208ENST00000581039 CCDC171Q6TFL3 1326 aa11.57□□□□□ -0.56
RFFL-208ENST00000581039 PTPRSQ13332 1948 aa11.56□□□□□ -0.56
RFFL-208ENST00000581039 POTEB3A0JP26 581 aa11.56□□□□□ -0.56
RFFL-208ENST00000581039 TRIM6-TRIM34B2RNG4 842 aa11.56□□□□□ -0.56
RFFL-208ENST00000581039 RBAK-RBAKDNI3L0D1 243 aa11.56□□□□□ -0.56
RFFL-208ENST00000581039 NCK2O43639 380 aa11.56□□□□□ -0.56
RFFL-208ENST00000581039 KDM4AO75164 1064 aa11.56□□□□□ -0.56
RFFL-208ENST00000581039 GGPS1O95749 300 aa11.56□□□□□ -0.56
RFFL-208ENST00000581039 TGFB3P10600 412 aa11.56□□□□□ -0.56
RFFL-208ENST00000581039 MRE11P49959 708 aa11.56□□□□□ -0.56
RFFL-208ENST00000581039 HSD17B4P51659 736 aa11.56□□□□□ -0.56
RFFL-208ENST00000581039 MKRN4PQ13434 485 aaPredicted RBP11.56□□□□□ -0.56
RFFL-208ENST00000581039 HSDL1Q3SXM5 330 aa11.56□□□□□ -0.56
RFFL-208ENST00000581039 POTEBQ6S5H4 581 aa11.56□□□□□ -0.56
RFFL-208ENST00000581039 VSIG10LQ86VR7 867 aa11.56□□□□□ -0.56
RFFL-208ENST00000581039 ZSCAN10Q96SZ4 725 aaPredicted RBP11.56□□□□□ -0.56
RFFL-208ENST00000581039 PDCD2LQ9BRP1 358 aa11.56□□□□□ -0.56
RFFL-208ENST00000581039 C16orf70Q9BSU1 422 aa11.56□□□□□ -0.56
RFFL-208ENST00000581039 UPF3BQ9BZI7 483 aaKnown RBP11.56□□□□□ -0.56
RFFL-208ENST00000581039 KCNH6Q9H252 994 aa11.56□□□□□ -0.56
RFFL-208ENST00000581039 MAP3K20Q9NYL2 800 aaKnown RBP11.56□□□□□ -0.56
RFFL-208ENST00000581039 NEDD4P46934 1319 aa11.56□□□□□ -0.56
RFFL-208ENST00000581039 H3BRB1 525 aa11.55□□□□□ -0.56
RFFL-208ENST00000581039 CAND2O75155 1236 aa11.55□□□□□ -0.56
RFFL-208ENST00000581039 RGS20O76081 388 aa11.55□□□□□ -0.56
RFFL-208ENST00000581039 SP2Q02086 613 aa11.55□□□□□ -0.56
RFFL-208ENST00000581039 ZP2Q05996 745 aa11.55□□□□□ -0.56
RFFL-208ENST00000581039 STOX1Q6ZVD7 989 aa11.55□□□□□ -0.56
RFFL-208ENST00000581039 RILPL2Q969X0 211 aa11.55□□□□□ -0.56
RFFL-208ENST00000581039 IL17RAQ96F46 866 aa11.55□□□□□ -0.56
RFFL-208ENST00000581039 FBXL18Q96ME1 805 aa11.55□□□□□ -0.56
RFFL-208ENST00000581039 IFIH1Q9BYX4 1025 aaKnown RBP11.55□□□□□ -0.56
RFFL-208ENST00000581039 TUT1Q9H6E5 874 aaKnown RBP11.55□□□□□ -0.56
RFFL-208ENST00000581039 CLDND1Q9NY35 253 aa11.55□□□□□ -0.56
RFFL-208ENST00000581039 C19orf67A6NJJ6 358 aa11.54□□□□□ -0.56
RFFL-208ENST00000581039 B4E1Z4 1266 aa11.54□□□□□ -0.56
RFFL-208ENST00000581039 NOP56O00567 594 aaKnown RBP11.54□□□□□ -0.56
RFFL-208ENST00000581039 TREHO43280 583 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms