RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 DCXO43602 365 aa22.36■■□□□ 1.17
NDEL1-209ENST00000580738 EIF3JO75822 258 aaKnown RBP22.36■■□□□ 1.17
NDEL1-209ENST00000580738 NR3C2P08235 984 aa22.36■■□□□ 1.17
NDEL1-209ENST00000580738 THPOP40225 353 aa22.36■■□□□ 1.17
NDEL1-209ENST00000580738 PTPROQ16827 1216 aa22.36■■□□□ 1.17
NDEL1-209ENST00000580738 PUS10Q3MIT2 529 aaKnown RBP22.36■■□□□ 1.17
NDEL1-209ENST00000580738 MCMDC2Q4G0Z9 681 aa22.36■■□□□ 1.17
NDEL1-209ENST00000580738 POTEBQ6S5H4 581 aa22.36■■□□□ 1.17
NDEL1-209ENST00000580738 MCF2L2Q86YR7 1114 aa22.36■■□□□ 1.17
NDEL1-209ENST00000580738 BANK1Q8NDB2 785 aa22.36■■□□□ 1.17
NDEL1-209ENST00000580738 EMSYQ7Z589 1322 aa22.35■■□□□ 1.17
NDEL1-209ENST00000580738 RSPH10B2B2RC85 870 aa22.35■■□□□ 1.17
NDEL1-209ENST00000580738 RSPH10BP0C881 870 aa22.35■■□□□ 1.17
NDEL1-209ENST00000580738 HOXD8P13378 290 aaPredicted RBP22.35■■□□□ 1.17
NDEL1-209ENST00000580738 QRICH1Q2TAL8 776 aa22.35■■□□□ 1.17
NDEL1-209ENST00000580738 TCEAL5Q5H9L2 206 aa22.35■■□□□ 1.17
NDEL1-209ENST00000580738 EP400NLQ6ZTU2 488 aa22.35■■□□□ 1.17
NDEL1-209ENST00000580738 SERINC5Q86VE9 423 aa22.35■■□□□ 1.17
NDEL1-209ENST00000580738 OSBPL7Q9BZF2 842 aa22.35■■□□□ 1.17
NDEL1-209ENST00000580738 PXMP2Q9NR77 195 aa22.35■■□□□ 1.17
NDEL1-209ENST00000580738 NEDD4P46934 1319 aa22.34■■□□□ 1.17
NDEL1-209ENST00000580738 KIAA1217Q5T5P2 1943 aa22.34■■□□□ 1.17
NDEL1-209ENST00000580738 H3BNC9 293 aa22.34■■□□□ 1.17
NDEL1-209ENST00000580738 RGS20O76081 388 aa22.34■■□□□ 1.17
NDEL1-209ENST00000580738 NHLH1Q02575 133 aa22.34■■□□□ 1.17
NDEL1-209ENST00000580738 ZP2Q05996 745 aa22.34■■□□□ 1.17
NDEL1-209ENST00000580738 GPM6BQ13491 265 aa22.34■■□□□ 1.17
NDEL1-209ENST00000580738 HSDL1Q3SXM5 330 aa22.34■■□□□ 1.17
NDEL1-209ENST00000580738 TIGD5Q53EQ6 642 aa22.34■■□□□ 1.17
NDEL1-209ENST00000580738 PLEKHG4Q58EX7 1191 aa22.34■■□□□ 1.17
NDEL1-209ENST00000580738 MYSM1Q5VVJ2 828 aa22.34■■□□□ 1.17
NDEL1-209ENST00000580738 DGKHQ86XP1 1220 aa22.34■■□□□ 1.17
NDEL1-209ENST00000580738 PNMA1Q8ND90 353 aa22.34■■□□□ 1.17
NDEL1-209ENST00000580738 FBXL18Q96ME1 805 aa22.34■■□□□ 1.17
NDEL1-209ENST00000580738 ZMYM6O95789 1325 aa22.33■■□□□ 1.17
NDEL1-209ENST00000580738 PPFIA4O75335 1185 aa22.33■■□□□ 1.17
NDEL1-209ENST00000580738 UPP2O95045 317 aa22.33■■□□□ 1.17
NDEL1-209ENST00000580738 FBXO11Q86XK2 927 aa22.33■■□□□ 1.17
NDEL1-209ENST00000580738 TMEM192Q8IY95 271 aa22.33■■□□□ 1.17
NDEL1-209ENST00000580738 PABPC5Q96DU9 382 aaKnown RBP22.33■■□□□ 1.17
NDEL1-209ENST00000580738 SPATA33Q96N06 139 aa22.33■■□□□ 1.17
NDEL1-209ENST00000580738 SAMD11Q96NU1 681 aa22.33■■□□□ 1.17
NDEL1-209ENST00000580738 YME1L1Q96TA2 773 aa22.33■■□□□ 1.17
NDEL1-209ENST00000580738 VAT1LQ9HCJ6 419 aa22.33■■□□□ 1.17
NDEL1-209ENST00000580738 MRPL11Q9Y3B7 192 aaKnown RBP22.33■■□□□ 1.17
NDEL1-209ENST00000580738 OPLAHO14841 1288 aa22.32■■□□□ 1.16
NDEL1-209ENST00000580738 CFBP00751 764 aa22.32■■□□□ 1.16
NDEL1-209ENST00000580738 PCP11498 1178 aaKnown RBP22.32■■□□□ 1.16
NDEL1-209ENST00000580738 NMIQ13287 307 aaPredicted RBP22.32■■□□□ 1.16
NDEL1-209ENST00000580738 COL19A1Q14993 1142 aa22.32■■□□□ 1.16
NDEL1-209ENST00000580738 CELF3Q5SZQ8 465 aaKnown RBP22.32■■□□□ 1.16
NDEL1-209ENST00000580738 ANKS1AQ92625 1134 aa22.32■■□□□ 1.16
NDEL1-209ENST00000580738 ESR2Q92731 530 aa22.32■■□□□ 1.16
NDEL1-209ENST00000580738 TOP1MTQ969P6 601 aa22.32■■□□□ 1.16
NDEL1-209ENST00000580738 C16orf70Q9BSU1 422 aa22.32■■□□□ 1.16
NDEL1-209ENST00000580738 JMJD4Q9H9V9 463 aa22.32■■□□□ 1.16
NDEL1-209ENST00000580738 C19orf67A6NJJ6 358 aa22.31■■□□□ 1.16
NDEL1-209ENST00000580738 MYCLP12524 364 aaPredicted RBP22.31■■□□□ 1.16
NDEL1-209ENST00000580738 SP2Q02086 613 aa22.31■■□□□ 1.16
NDEL1-209ENST00000580738 ATP6V0A1Q93050 837 aa22.31■■□□□ 1.16
NDEL1-209ENST00000580738 MICAL3Q7RTP6 2002 aa22.3■■□□□ 1.16
NDEL1-209ENST00000580738 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.3■■□□□ 1.16
NDEL1-209ENST00000580738 DHX16O60231 1041 aaKnown RBP22.3■■□□□ 1.16
NDEL1-209ENST00000580738 GGPS1O95749 300 aa22.3■■□□□ 1.16
NDEL1-209ENST00000580738 HSD17B4P51659 736 aa22.3■■□□□ 1.16
NDEL1-209ENST00000580738 ANKRD45Q5TZF3 282 aa22.3■■□□□ 1.16
NDEL1-209ENST00000580738 HFE2Q6ZVN8 426 aa22.3■■□□□ 1.16
NDEL1-209ENST00000580738 ZFP91Q96JP5 570 aaPredicted RBP22.3■■□□□ 1.16
NDEL1-209ENST00000580738 PDCD2LQ9BRP1 358 aa22.3■■□□□ 1.16
NDEL1-209ENST00000580738 RNF41Q9H4P4 317 aaPredicted RBP22.3■■□□□ 1.16
NDEL1-209ENST00000580738 NSUN3Q9H649 340 aaKnown RBP22.3■■□□□ 1.16
NDEL1-209ENST00000580738 KAT14Q9H8E8 782 aa22.3■■□□□ 1.16
NDEL1-209ENST00000580738 CLDND1Q9NY35 253 aa22.3■■□□□ 1.16
NDEL1-209ENST00000580738 PRKAG3Q9UGI9 489 aa22.3■■□□□ 1.16
NDEL1-209ENST00000580738 TRIOO75962 3097 aa22.3■■□□□ 1.16
NDEL1-209ENST00000580738 C5orf42Q9H799 3197 aa22.3■■□□□ 1.16
NDEL1-209ENST00000580738 C17orf102A2RUQ5 167 aa22.29■■□□□ 1.16
NDEL1-209ENST00000580738 TREHO43280 583 aa22.29■■□□□ 1.16
NDEL1-209ENST00000580738 CTSHP09668 335 aa22.29■■□□□ 1.16
NDEL1-209ENST00000580738 LTBRP36941 435 aa22.29■■□□□ 1.16
NDEL1-209ENST00000580738 PDE1AP54750 535 aa22.29■■□□□ 1.16
NDEL1-209ENST00000580738 ASPRV1Q53RT3 343 aa22.29■■□□□ 1.16
NDEL1-209ENST00000580738 ADHFE1Q8IWW8 467 aa22.29■■□□□ 1.16
NDEL1-209ENST00000580738 SEPT8Q92599 483 aa22.29■■□□□ 1.16
NDEL1-209ENST00000580738 BCAS3Q9H6U6 928 aa22.29■■□□□ 1.16
NDEL1-209ENST00000580738 FAM50BQ9Y247 325 aa22.29■■□□□ 1.16
NDEL1-209ENST00000580738 CCDC171Q6TFL3 1326 aa22.29■■□□□ 1.16
NDEL1-209ENST00000580738 KDM4AO75164 1064 aa22.28■■□□□ 1.16
NDEL1-209ENST00000580738 UBA1P22314 1058 aaKnown RBP22.28■■□□□ 1.16
NDEL1-209ENST00000580738 HOXC8P31273 242 aa22.28■■□□□ 1.16
NDEL1-209ENST00000580738 IRS1P35568 1242 aa22.28■■□□□ 1.16
NDEL1-209ENST00000580738 IL31RAQ8NI17 732 aa22.28■■□□□ 1.16
NDEL1-209ENST00000580738 GPKOWQ92917 476 aaPredicted RBP eCLIP22.28■■□□□ 1.16
NDEL1-209ENST00000580738 IFIH1Q9BYX4 1025 aaKnown RBP22.28■■□□□ 1.16
NDEL1-209ENST00000580738 MYH7BA7E2Y1 1941 aa22.27■■□□□ 1.16
NDEL1-209ENST00000580738 MYO7AQ13402 2215 aa22.27■■□□□ 1.16
NDEL1-209ENST00000580738 H3BRB1 525 aa22.27■■□□□ 1.16
NDEL1-209ENST00000580738 SMIM10L2AP0DMW4 78 aa22.27■■□□□ 1.16
NDEL1-209ENST00000580738 SMIM10L2BP0DMW5 78 aa22.27■■□□□ 1.16
NDEL1-209ENST00000580738 HOXA13P31271 388 aaPredicted RBP22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms