RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.87□□□□□ -0.199e-7■□□□□ 9.9
CCDC84-209ENST00000580556 GJB4Q9NTQ9 266 aa13.87□□□□□ -0.19
CCDC84-209ENST00000580556 FOXD4L1Q9NU39 408 aa13.87□□□□□ -0.19
CCDC84-209ENST00000580556 DAXXQ9UER7 740 aaPredicted RBP13.87□□□□□ -0.19
CCDC84-209ENST00000580556 ADD3Q9UEY8 706 aaKnown RBP13.87□□□□□ -0.19
CCDC84-209ENST00000580556 TCF20Q9UGU0 1960 aaKnown RBP13.87□□□□□ -0.19
CCDC84-209ENST00000580556 SPDYE3A6NKU9 549 aa13.86□□□□□ -0.19
CCDC84-209ENST00000580556 H3BQV1 296 aa13.86□□□□□ -0.19
CCDC84-209ENST00000580556 SYT1P21579 422 aa13.86□□□□□ -0.19
CCDC84-209ENST00000580556 ZNF792Q3KQV3 632 aa13.86□□□□□ -0.19
CCDC84-209ENST00000580556 USP17L6PQ6QN14 398 aa13.86□□□□□ -0.19
CCDC84-209ENST00000580556 ZNF467Q7Z7K2 595 aaPredicted RBP13.86□□□□□ -0.19
CCDC84-209ENST00000580556 DIS3L2Q8IYB7 885 aaKnown RBP13.86□□□□□ -0.19
CCDC84-209ENST00000580556 MSL3Q8N5Y2 521 aaKnown RBP13.86□□□□□ -0.19
CCDC84-209ENST00000580556 TBC1D5Q92609 795 aa13.86□□□□□ -0.19
CCDC84-209ENST00000580556 UHRF1Q96T88 793 aaPredicted RBP13.86□□□□□ -0.19
CCDC84-209ENST00000580556 PBX4Q9BYU1 374 aa13.86□□□□□ -0.19
CCDC84-209ENST00000580556 FOXP1Q9H334 677 aaPredicted RBP13.86□□□□□ -0.19
CCDC84-209ENST00000580556 EHMT1Q9H9B1 1298 aa13.86□□□□□ -0.19
CCDC84-209ENST00000580556 TMEM39AQ9NV64 488 aa13.86□□□□□ -0.19
CCDC84-209ENST00000580556 THEGQ9P2T0 379 aa13.86□□□□□ -0.19
CCDC84-209ENST00000580556 A0A1W2PQ45 241 aaPredicted RBP13.85□□□□□ -0.19
CCDC84-209ENST00000580556 A0A1W2PQY0 241 aa13.85□□□□□ -0.19
CCDC84-209ENST00000580556 STX6O43752 255 aa13.85□□□□□ -0.19
CCDC84-209ENST00000580556 U2AF2P26368 475 aaKnown RBP eCLIP13.85□□□□□ -0.196e-7■□□□□ 11
CCDC84-209ENST00000580556 HOXA13P31271 388 aaPredicted RBP13.85□□□□□ -0.19
CCDC84-209ENST00000580556 FAAP100Q0VG06 881 aa13.85□□□□□ -0.19
CCDC84-209ENST00000580556 UBE2SQ16763 222 aa13.85□□□□□ -0.19
CCDC84-209ENST00000580556 C16orf59Q7L2K0 433 aa13.85□□□□□ -0.19
CCDC84-209ENST00000580556 KRT25Q7Z3Z0 450 aa13.85□□□□□ -0.19
CCDC84-209ENST00000580556 NSUN6Q8TEA1 469 aaKnown RBP13.85□□□□□ -0.19
CCDC84-209ENST00000580556 TNFRSF25Q93038 417 aa13.85□□□□□ -0.19
CCDC84-209ENST00000580556 MAML3Q96JK9 1138 aa13.85□□□□□ -0.19
CCDC84-209ENST00000580556 IPO9Q96P70 1041 aaKnown RBP13.85□□□□□ -0.19
CCDC84-209ENST00000580556 GAS2L1Q99501 681 aaPredicted RBP13.85□□□□□ -0.19
CCDC84-209ENST00000580556 XPNPEP3Q9NQH7 507 aa13.85□□□□□ -0.19
CCDC84-209ENST00000580556 COL20A1Q9P218 1284 aa13.85□□□□□ -0.19
CCDC84-209ENST00000580556 LCTP09848 1927 aa13.85□□□□□ -0.19
CCDC84-209ENST00000580556 ZNFX1Q9P2E3 1918 aaKnown RBP13.85□□□□□ -0.19
CCDC84-209ENST00000580556 B4DLN1 442 aa13.84□□□□□ -0.19
CCDC84-209ENST00000580556 PGK2P07205 417 aa13.84□□□□□ -0.19
CCDC84-209ENST00000580556 HOXD11P31277 338 aaPredicted RBP13.84□□□□□ -0.19
CCDC84-209ENST00000580556 DDIT3P35638 169 aa13.84□□□□□ -0.19
CCDC84-209ENST00000580556 SREBF1P36956 1147 aa13.84□□□□□ -0.19
CCDC84-209ENST00000580556 GUCY1B3Q02153 619 aa13.84□□□□□ -0.19
CCDC84-209ENST00000580556 XRRA1Q6P2D8 792 aa13.84□□□□□ -0.19
CCDC84-209ENST00000580556 MAMDC4Q6UXC1 1216 aa13.84□□□□□ -0.19
CCDC84-209ENST00000580556 SPRYD3Q8NCJ5 442 aa13.84□□□□□ -0.19
CCDC84-209ENST00000580556 MORC4Q8TE76 937 aa13.84□□□□□ -0.19
CCDC84-209ENST00000580556 FGD4Q96M96 766 aa13.84□□□□□ -0.19
CCDC84-209ENST00000580556 IWS1Q96ST2 819 aa13.84□□□□□ -0.19
CCDC84-209ENST00000580556 RMDN3Q96TC7 470 aa13.84□□□□□ -0.19
CCDC84-209ENST00000580556 MPHOSPH6Q99547 160 aaKnown RBP13.84□□□□□ -0.19
CCDC84-209ENST00000580556 PXMP2Q9NR77 195 aa13.84□□□□□ -0.19
CCDC84-209ENST00000580556 PCDHA6Q9UN73 950 aa13.84□□□□□ -0.19
CCDC84-209ENST00000580556 PCDHA8Q9Y5H6 950 aa13.84□□□□□ -0.19
CCDC84-209ENST00000580556 ASTN1O14525 1302 aa13.84□□□□□ -0.19
CCDC84-209ENST00000580556 CCDC194A0A1B0GVG4 234 aa13.83□□□□□ -0.2
CCDC84-209ENST00000580556 VPS37CA5D8V6 355 aaPredicted RBP13.83□□□□□ -0.2
CCDC84-209ENST00000580556 SOWAHBA6NEL2 793 aa13.83□□□□□ -0.2
CCDC84-209ENST00000580556 ASB14A6NK59 587 aa13.83□□□□□ -0.2
CCDC84-209ENST00000580556 BTBD18B2RXH4 712 aa13.83□□□□□ -0.2
CCDC84-209ENST00000580556 ADAMTS3O15072 1205 aa13.83□□□□□ -0.2
CCDC84-209ENST00000580556 RARBP10826 455 aa13.83□□□□□ -0.2
CCDC84-209ENST00000580556 IGFBP4P22692 258 aa13.83□□□□□ -0.2
CCDC84-209ENST00000580556 EDNRBP24530 442 aa13.83□□□□□ -0.2
CCDC84-209ENST00000580556 ALDH5A1P51649 535 aaPredicted RBP13.83□□□□□ -0.2
CCDC84-209ENST00000580556 FOSBP53539 338 aa13.83□□□□□ -0.2
CCDC84-209ENST00000580556 MRPS5P82675 430 aaKnown RBP13.83□□□□□ -0.2
CCDC84-209ENST00000580556 CNTN2Q02246 1040 aa13.83□□□□□ -0.2
CCDC84-209ENST00000580556 JAKMIP3Q5VZ66 844 aa13.83□□□□□ -0.2
CCDC84-209ENST00000580556 NOSTRINQ8IVI9 506 aa13.83□□□□□ -0.2
CCDC84-209ENST00000580556 OXER1Q8TDS5 423 aa13.83□□□□□ -0.2
CCDC84-209ENST00000580556 CRYGNQ8WXF5 182 aa13.83□□□□□ -0.2
CCDC84-209ENST00000580556 TAAR1Q96RJ0 339 aa13.83□□□□□ -0.2
CCDC84-209ENST00000580556 ANO3Q9BYT9 981 aa13.83□□□□□ -0.2
CCDC84-209ENST00000580556 MTMR6Q9Y217 621 aa13.83□□□□□ -0.2
CCDC84-209ENST00000580556 SYNGAP1Q96PV0 1343 aa13.83□□□□□ -0.2
CCDC84-209ENST00000580556 REV3LO60673 3130 aa13.82□□□□□ -0.2
CCDC84-209ENST00000580556 LRRC37A2A6NM11 1700 aa13.82□□□□□ -0.2
CCDC84-209ENST00000580556 STAM2O75886 525 aa13.82□□□□□ -0.2
CCDC84-209ENST00000580556 ACRP10323 421 aa13.82□□□□□ -0.2
CCDC84-209ENST00000580556 IRX5P78411 483 aaPredicted RBP13.82□□□□□ -0.2
CCDC84-209ENST00000580556 NR5A1Q13285 461 aa13.82□□□□□ -0.2
CCDC84-209ENST00000580556 GNL2Q13823 731 aaKnown RBP13.82□□□□□ -0.2
CCDC84-209ENST00000580556 NONOQ15233 471 aaKnown RBP eCLIP13.82□□□□□ -0.2
CCDC84-209ENST00000580556 TMEM240Q5SV17 173 aa13.82□□□□□ -0.2
CCDC84-209ENST00000580556 ARHGEF16Q5VV41 709 aa13.82□□□□□ -0.2
CCDC84-209ENST00000580556 PCNX4Q63HM2 1172 aa13.82□□□□□ -0.2
CCDC84-209ENST00000580556 BRAPQ7Z569 592 aa13.82□□□□□ -0.2
CCDC84-209ENST00000580556 FCHSD1Q86WN1 690 aa13.82□□□□□ -0.2
CCDC84-209ENST00000580556 RASGRP4Q8TDF6 673 aa13.82□□□□□ -0.2
CCDC84-209ENST00000580556 PDCD2LQ9BRP1 358 aa13.82□□□□□ -0.2
CCDC84-209ENST00000580556 TMEM260Q9NX78 707 aa13.82□□□□□ -0.2
CCDC84-209ENST00000580556 CIZ1Q9ULV3 898 aaPredicted RBP13.82□□□□□ -0.2
CCDC84-209ENST00000580556 XIRP2A4UGR9 3374 aa13.82□□□□□ -0.2
CCDC84-209ENST00000580556 CHD9Q3L8U1 2897 aa13.81□□□□□ -0.2
CCDC84-209ENST00000580556 NCOR1O75376 2440 aa13.81□□□□□ -0.2
CCDC84-209ENST00000580556 GBF1Q92538 1859 aa13.81□□□□□ -0.2
CCDC84-209ENST00000580556 KIF28PB7ZC32 967 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms