RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 RNF207Q6ZRF8 634 aa16.62■□□□□ 0.25
CDK5RAP3-218ENST00000580391 ERO1BQ86YB8 467 aa16.62■□□□□ 0.25
CDK5RAP3-218ENST00000580391 PURBQ96QR8 312 aaKnown RBP16.62■□□□□ 0.25
CDK5RAP3-218ENST00000580391 TAAR1Q96RJ0 339 aa16.62■□□□□ 0.25
CDK5RAP3-218ENST00000580391 IFNKQ9P0W0 207 aa16.62■□□□□ 0.25
CDK5RAP3-218ENST00000580391 POTEFA5A3E0 1075 aa16.62■□□□□ 0.25
CDK5RAP3-218ENST00000580391 RHOBTB3O94955 611 aa16.62■□□□□ 0.25
CDK5RAP3-218ENST00000580391 ARP10275 920 aa16.62■□□□□ 0.25
CDK5RAP3-218ENST00000580391 EIF2AK2P19525 551 aaKnown RBP16.62■□□□□ 0.25
CDK5RAP3-218ENST00000580391 SETQ01105 290 aaPredicted RBP16.62■□□□□ 0.25
CDK5RAP3-218ENST00000580391 PPATQ06203 517 aa16.62■□□□□ 0.25
CDK5RAP3-218ENST00000580391 HAUS3Q68CZ6 603 aa16.62■□□□□ 0.25
CDK5RAP3-218ENST00000580391 POTEGQ6S5H5 508 aa16.62■□□□□ 0.25
CDK5RAP3-218ENST00000580391 POTEEQ6S8J3 1075 aa16.62■□□□□ 0.25
CDK5RAP3-218ENST00000580391 SLC5A5Q92911 643 aa16.62■□□□□ 0.25
CDK5RAP3-218ENST00000580391 XPO4Q9C0E2 1151 aaKnown RBP16.62■□□□□ 0.25
CDK5RAP3-218ENST00000580391 NT5C3AQ9H0P0 336 aa16.62■□□□□ 0.25
CDK5RAP3-218ENST00000580391 KIAA1024Q9UPX6 916 aa16.62■□□□□ 0.25
CDK5RAP3-218ENST00000580391 DOCK5Q9H7D0 1870 aa16.62■□□□□ 0.25
CDK5RAP3-218ENST00000580391 A0A0G2JLL6 359 aaPredicted RBP16.61■□□□□ 0.25
CDK5RAP3-218ENST00000580391 ESPNB1AK53 854 aa16.61■□□□□ 0.25
CDK5RAP3-218ENST00000580391 E9PMD0 336 aa16.61■□□□□ 0.25
CDK5RAP3-218ENST00000580391 EML1O00423 815 aa16.61■□□□□ 0.25
CDK5RAP3-218ENST00000580391 MEIS1O00470 390 aa16.61■□□□□ 0.25
CDK5RAP3-218ENST00000580391 COBLO75128 1261 aa16.61■□□□□ 0.25
CDK5RAP3-218ENST00000580391 PSMD10O75832 226 aa16.61■□□□□ 0.25
CDK5RAP3-218ENST00000580391 ITGB5P18084 799 aa16.61■□□□□ 0.25
CDK5RAP3-218ENST00000580391 FANCCQ00597 558 aa16.61■□□□□ 0.25
CDK5RAP3-218ENST00000580391 AMPD3Q01432 767 aa16.61■□□□□ 0.25
CDK5RAP3-218ENST00000580391 CT47A1Q5JQC4 288 aaPredicted RBP16.61■□□□□ 0.25
CDK5RAP3-218ENST00000580391 LRCH2Q5VUJ6 765 aa16.61■□□□□ 0.25
CDK5RAP3-218ENST00000580391 PRRT2Q7Z6L0 340 aaPredicted RBP16.61■□□□□ 0.25
CDK5RAP3-218ENST00000580391 PNMA8AQ86V59 439 aaPredicted RBP16.61■□□□□ 0.25
CDK5RAP3-218ENST00000580391 DRC7Q8IY82 874 aa16.61■□□□□ 0.25
CDK5RAP3-218ENST00000580391 MXRA8Q9BRK3 442 aa16.61■□□□□ 0.25
CDK5RAP3-218ENST00000580391 TEX13BQ9BXU2 312 aa16.61■□□□□ 0.25
CDK5RAP3-218ENST00000580391 MAP3K20Q9NYL2 800 aaKnown RBP16.61■□□□□ 0.25
CDK5RAP3-218ENST00000580391 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.61■□□□□ 0.25
CDK5RAP3-218ENST00000580391 MAPK8IP1Q9UQF2 711 aa16.61■□□□□ 0.25
CDK5RAP3-218ENST00000580391 RABGAP1Q9Y3P9 1069 aa16.61■□□□□ 0.25
CDK5RAP3-218ENST00000580391 WDR81Q562E7 1941 aa16.61■□□□□ 0.25
CDK5RAP3-218ENST00000580391 ATP2A1O14983 1001 aa16.6■□□□□ 0.25
CDK5RAP3-218ENST00000580391 PEX10O60683 326 aa16.6■□□□□ 0.25
CDK5RAP3-218ENST00000580391 PRCPP42785 496 aa16.6■□□□□ 0.25
CDK5RAP3-218ENST00000580391 MRPS9P82933 396 aaKnown RBP16.6■□□□□ 0.25
CDK5RAP3-218ENST00000580391 PDE4DQ08499 809 aa16.6■□□□□ 0.25
CDK5RAP3-218ENST00000580391 BAATQ14032 418 aaPredicted RBP16.6■□□□□ 0.25
CDK5RAP3-218ENST00000580391 PLS1Q14651 629 aa16.6■□□□□ 0.25
CDK5RAP3-218ENST00000580391 MAP1SQ66K74 1059 aaPredicted RBP16.6■□□□□ 0.25
CDK5RAP3-218ENST00000580391 DYMQ7RTS9 669 aa16.6■□□□□ 0.25
CDK5RAP3-218ENST00000580391 CATSPER3Q86XQ3 398 aa16.6■□□□□ 0.25
CDK5RAP3-218ENST00000580391 SAMD3Q8N6K7 520 aa16.6■□□□□ 0.25
CDK5RAP3-218ENST00000580391 SAMSN1Q9NSI8 373 aaKnown RBP16.6■□□□□ 0.25
CDK5RAP3-218ENST00000580391 EXOC1Q9NV70 894 aa16.6■□□□□ 0.25
CDK5RAP3-218ENST00000580391 NRBP1Q9UHY1 535 aa16.6■□□□□ 0.25
CDK5RAP3-218ENST00000580391 CLEC11AQ9Y240 323 aa16.6■□□□□ 0.25
CDK5RAP3-218ENST00000580391 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.6■□□□□ 0.25
CDK5RAP3-218ENST00000580391 LOXHD1Q8IVV2 1947 aa16.6■□□□□ 0.25
CDK5RAP3-218ENST00000580391 TRAF5O00463 557 aa16.6■□□□□ 0.25
CDK5RAP3-218ENST00000580391 CHMP2AO43633 222 aa16.6■□□□□ 0.25
CDK5RAP3-218ENST00000580391 SPATA31C1P0DKV0 1188 aa16.6■□□□□ 0.25
CDK5RAP3-218ENST00000580391 ZNF18P17022 549 aa16.6■□□□□ 0.25
CDK5RAP3-218ENST00000580391 CYP4A11Q02928 519 aa16.6■□□□□ 0.25
CDK5RAP3-218ENST00000580391 PGM5Q15124 567 aa16.6■□□□□ 0.25
CDK5RAP3-218ENST00000580391 PCNX4Q63HM2 1172 aa16.6■□□□□ 0.25
CDK5RAP3-218ENST00000580391 ZSCAN30Q86W11 494 aa16.6■□□□□ 0.25
CDK5RAP3-218ENST00000580391 ERMNQ8TAM6 284 aa16.6■□□□□ 0.25
CDK5RAP3-218ENST00000580391 ZNF830Q96NB3 372 aaPredicted RBP16.6■□□□□ 0.25
CDK5RAP3-218ENST00000580391 ZNF577Q9BSK1 485 aa16.6■□□□□ 0.25
CDK5RAP3-218ENST00000580391 RRAGDQ9NQL2 400 aaPredicted RBP16.6■□□□□ 0.25
CDK5RAP3-218ENST00000580391 PXMP2Q9NR77 195 aa16.6■□□□□ 0.25
CDK5RAP3-218ENST00000580391 HOXC10Q9NYD6 342 aa16.6■□□□□ 0.25
CDK5RAP3-218ENST00000580391 SLC26A4O43511 780 aa16.59■□□□□ 0.25
CDK5RAP3-218ENST00000580391 PAK1Q13153 545 aa16.59■□□□□ 0.25
CDK5RAP3-218ENST00000580391 CCDC144BQ3MJ40 725 aa16.59■□□□□ 0.25
CDK5RAP3-218ENST00000580391 OTOP1Q7RTM1 612 aa16.59■□□□□ 0.25
CDK5RAP3-218ENST00000580391 ARMC9Q7Z3E5 817 aa16.59■□□□□ 0.25
CDK5RAP3-218ENST00000580391 PROCA1Q8NCQ7 364 aaPredicted RBP16.59■□□□□ 0.25
CDK5RAP3-218ENST00000580391 GIMAP8Q8ND71 665 aaPredicted RBP16.59■□□□□ 0.25
CDK5RAP3-218ENST00000580391 OPTNQ96CV9 577 aa16.59■□□□□ 0.25
CDK5RAP3-218ENST00000580391 RMDN3Q96TC7 470 aa16.59■□□□□ 0.25
CDK5RAP3-218ENST00000580391 KCNH4Q9UQ05 1017 aa16.59■□□□□ 0.25
CDK5RAP3-218ENST00000580391 ZKSCAN5Q9Y2L8 839 aa16.59■□□□□ 0.25
CDK5RAP3-218ENST00000580391 GOLGA6L6A8MZA4 724 aa16.58■□□□□ 0.25
CDK5RAP3-218ENST00000580391 GAS7O60861 476 aa16.58■□□□□ 0.25
CDK5RAP3-218ENST00000580391 SSBP05455 408 aaKnown RBP eCLIP16.58■□□□□ 0.25
CDK5RAP3-218ENST00000580391 FCER1AP12319 257 aa16.58■□□□□ 0.25
CDK5RAP3-218ENST00000580391 PTGS1P23219 599 aa16.58■□□□□ 0.25
CDK5RAP3-218ENST00000580391 RPA1P27694 616 aa16.58■□□□□ 0.25
CDK5RAP3-218ENST00000580391 PPIL2Q13356 520 aa16.58■□□□□ 0.25
CDK5RAP3-218ENST00000580391 PPP2R5CQ13362 524 aa16.58■□□□□ 0.25
CDK5RAP3-218ENST00000580391 SPATA1Q5VX52 437 aa16.58■□□□□ 0.25
CDK5RAP3-218ENST00000580391 ADSSL1Q8N142 457 aa16.58■□□□□ 0.25
CDK5RAP3-218ENST00000580391 NELFBQ8WX92 580 aa16.58■□□□□ 0.25
CDK5RAP3-218ENST00000580391 DDX12PQ92771 950 aa16.58■□□□□ 0.25
CDK5RAP3-218ENST00000580391 HPS3Q969F9 1004 aa16.58■□□□□ 0.25
CDK5RAP3-218ENST00000580391 EIF2AK1Q9BQI3 630 aaKnown RBP16.58■□□□□ 0.25
CDK5RAP3-218ENST00000580391 PDCD2LQ9BRP1 358 aa16.58■□□□□ 0.25
CDK5RAP3-218ENST00000580391 WDR11Q9BZH6 1224 aa16.58■□□□□ 0.25
CDK5RAP3-218ENST00000580391 ACAD9Q9H845 621 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms