RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 TGS1Q96RS0 853 aaKnown RBP20.76■□□□□ 0.91
MKS1-209ENST00000580127 CTAGE1Q96RT6 745 aa20.76■□□□□ 0.91
MKS1-209ENST00000580127 U3KPZ7 1027 aaPredicted RBP20.76■□□□□ 0.91
MKS1-209ENST00000580127 LAMA4Q16363 1823 aa20.76■□□□□ 0.91
MKS1-209ENST00000580127 CHD7Q9P2D1 2997 aa20.76■□□□□ 0.91
MKS1-209ENST00000580127 SPTBN5Q9NRC6 3674 aaKnown RBP20.75■□□□□ 0.91
MKS1-209ENST00000580127 NBNO60934 754 aa20.75■□□□□ 0.91
MKS1-209ENST00000580127 GJB5O95377 273 aa20.75■□□□□ 0.91
MKS1-209ENST00000580127 GGPS1O95749 300 aa20.75■□□□□ 0.91
MKS1-209ENST00000580127 AMHP03971 560 aa20.75■□□□□ 0.91
MKS1-209ENST00000580127 ZNF286BP0CG31 522 aa20.75■□□□□ 0.91
MKS1-209ENST00000580127 KCNQ1P51787 676 aa20.75■□□□□ 0.91
MKS1-209ENST00000580127 GNPTABQ3T906 1256 aa20.75■□□□□ 0.91
MKS1-209ENST00000580127 STAG2Q8N3U4 1231 aa20.75■□□□□ 0.91
MKS1-209ENST00000580127 DHX38Q92620 1227 aaKnown RBP20.75■□□□□ 0.91
MKS1-209ENST00000580127 INSL6Q9Y581 213 aa20.75■□□□□ 0.91
MKS1-209ENST00000580127 TRANK1O15050 2925 aa20.74■□□□□ 0.91
MKS1-209ENST00000580127 PALM3A6NDB9 673 aaPredicted RBP20.74■□□□□ 0.91
MKS1-209ENST00000580127 EPOPA6NHQ4 379 aa20.74■□□□□ 0.91
MKS1-209ENST00000580127 RSPH10B2B2RC85 870 aa20.74■□□□□ 0.91
MKS1-209ENST00000580127 LGR5O75473 907 aa20.74■□□□□ 0.91
MKS1-209ENST00000580127 STAM2O75886 525 aa20.74■□□□□ 0.91
MKS1-209ENST00000580127 IGHDP01880 384 aa20.74■□□□□ 0.91
MKS1-209ENST00000580127 RSPH10BP0C881 870 aa20.74■□□□□ 0.91
MKS1-209ENST00000580127 GNAT1P11488 350 aa20.74■□□□□ 0.91
MKS1-209ENST00000580127 HOXD8P13378 290 aaPredicted RBP20.74■□□□□ 0.91
MKS1-209ENST00000580127 PGM5Q15124 567 aa20.74■□□□□ 0.91
MKS1-209ENST00000580127 ZNF618Q5T7W0 954 aa20.74■□□□□ 0.91
MKS1-209ENST00000580127 MTMR8Q96EF0 704 aa20.74■□□□□ 0.91
MKS1-209ENST00000580127 MAD2L2Q9UI95 211 aa20.74■□□□□ 0.91
MKS1-209ENST00000580127 NOP56O00567 594 aaKnown RBP20.73■□□□□ 0.91
MKS1-209ENST00000580127 IFIT3O14879 490 aaKnown RBP20.73■□□□□ 0.91
MKS1-209ENST00000580127 HOXA13P31271 388 aaPredicted RBP20.73■□□□□ 0.91
MKS1-209ENST00000580127 THPOP40225 353 aa20.73■□□□□ 0.91
MKS1-209ENST00000580127 GPNMBQ14956 572 aa20.73■□□□□ 0.91
MKS1-209ENST00000580127 SEC23AQ15436 765 aa20.73■□□□□ 0.91
MKS1-209ENST00000580127 RALYLQ86SE5 291 aaKnown RBP20.73■□□□□ 0.91
MKS1-209ENST00000580127 FCHSD1Q86WN1 690 aa20.73■□□□□ 0.91
MKS1-209ENST00000580127 HOMER1Q86YM7 354 aa20.73■□□□□ 0.91
MKS1-209ENST00000580127 USP26Q9BXU7 913 aa20.73■□□□□ 0.91
MKS1-209ENST00000580127 PNMA6FA0A0J9YX94 578 aa20.72■□□□□ 0.91
MKS1-209ENST00000580127 C17orf102A2RUQ5 167 aa20.72■□□□□ 0.91
MKS1-209ENST00000580127 H3BRB1 525 aa20.72■□□□□ 0.91
MKS1-209ENST00000580127 ERVK-21P61565 698 aa20.72■□□□□ 0.91
MKS1-209ENST00000580127 DEFB103AP81534 67 aa20.72■□□□□ 0.91
MKS1-209ENST00000580127 NEDD9Q14511 834 aa20.72■□□□□ 0.91
MKS1-209ENST00000580127 HSDL1Q3SXM5 330 aa20.72■□□□□ 0.91
MKS1-209ENST00000580127 KRT40Q6A162 431 aa20.72■□□□□ 0.91
MKS1-209ENST00000580127 SERINC5Q86VE9 423 aa20.72■□□□□ 0.91
MKS1-209ENST00000580127 ATP6V0A1Q93050 837 aa20.72■□□□□ 0.91
MKS1-209ENST00000580127 NECAB3Q96P71 396 aaPredicted RBP20.72■□□□□ 0.91
MKS1-209ENST00000580127 TUT1Q9H6E5 874 aaKnown RBP20.72■□□□□ 0.91
MKS1-209ENST00000580127 OPLAHO14841 1288 aa20.71■□□□□ 0.91
MKS1-209ENST00000580127 FAM117BQ6P1L5 589 aa20.71■□□□□ 0.91
MKS1-209ENST00000580127 CATIPQ7Z7H3 387 aa20.71■□□□□ 0.91
MKS1-209ENST00000580127 RIOX1Q9H6W3 641 aa20.71■□□□□ 0.91
MKS1-209ENST00000580127 MTUS1Q9ULD2 1270 aa20.71■□□□□ 0.91
MKS1-209ENST00000580127 LCHNA4D1U4 455 aa20.7■□□□□ 0.9
MKS1-209ENST00000580127 LPXNO60711 386 aa20.7■□□□□ 0.9
MKS1-209ENST00000580127 CAND2O75155 1236 aa20.7■□□□□ 0.9
MKS1-209ENST00000580127 RGS20O76081 388 aa20.7■□□□□ 0.9
MKS1-209ENST00000580127 ARHGEF15O94989 841 aa20.7■□□□□ 0.9
MKS1-209ENST00000580127 ZNF200P98182 395 aaPredicted RBP20.7■□□□□ 0.9
MKS1-209ENST00000580127 GRM4Q14833 912 aa20.7■□□□□ 0.9
MKS1-209ENST00000580127 WTAPQ15007 396 aa20.7■□□□□ 0.9
MKS1-209ENST00000580127 TRIM71Q2Q1W2 868 aaKnown RBP20.7■□□□□ 0.9
MKS1-209ENST00000580127 TMCO2Q7Z6W1 182 aaPredicted RBP20.7■□□□□ 0.9
MKS1-209ENST00000580127 SEPT8Q92599 483 aa20.7■□□□□ 0.9
MKS1-209ENST00000580127 CUL5Q93034 780 aa20.7■□□□□ 0.9
MKS1-209ENST00000580127 SAMD11Q96NU1 681 aa20.7■□□□□ 0.9
MKS1-209ENST00000580127 PIGSQ96S52 555 aa20.7■□□□□ 0.9
MKS1-209ENST00000580127 C16orf70Q9BSU1 422 aa20.7■□□□□ 0.9
MKS1-209ENST00000580127 SUGCTQ9HAC7 445 aa20.7■□□□□ 0.9
MKS1-209ENST00000580127 LINC01553A4QN01 128 aa20.69■□□□□ 0.9
MKS1-209ENST00000580127 PPP1R11O60927 126 aaPredicted RBP20.69■□□□□ 0.9
MKS1-209ENST00000580127 UBA1P22314 1058 aaKnown RBP20.69■□□□□ 0.9
MKS1-209ENST00000580127 PTPROQ16827 1216 aa20.69■□□□□ 0.9
MKS1-209ENST00000580127 CYB5R4Q7L1T6 521 aa20.69■□□□□ 0.9
MKS1-209ENST00000580127 FBXO22Q8NEZ5 403 aa20.69■□□□□ 0.9
MKS1-209ENST00000580127 DBF4BQ8NFT6 615 aa20.69■□□□□ 0.9
MKS1-209ENST00000580127 NCOA7Q8NI08 942 aa20.69■□□□□ 0.9
MKS1-209ENST00000580127 GDPD5Q8WTR4 605 aa20.69■□□□□ 0.9
MKS1-209ENST00000580127 FAM122AQ96E09 287 aa20.69■□□□□ 0.9
MKS1-209ENST00000580127 ZNF215Q9UL58 517 aaPredicted RBP20.69■□□□□ 0.9
MKS1-209ENST00000580127 BAZ2BQ9UIF8 2168 aaKnown RBP20.68■□□□□ 0.9
MKS1-209ENST00000580127 SORBS3O60504 671 aa20.68■□□□□ 0.9
MKS1-209ENST00000580127 SP2Q02086 613 aa20.68■□□□□ 0.9
MKS1-209ENST00000580127 XRRA1Q6P2D8 792 aa20.68■□□□□ 0.9
MKS1-209ENST00000580127 MYOCDQ8IZQ8 938 aa20.68■□□□□ 0.9
MKS1-209ENST00000580127 GIMAP8Q8ND71 665 aaPredicted RBP20.68■□□□□ 0.9
MKS1-209ENST00000580127 PLEKHG4Q58EX7 1191 aa20.67■□□□□ 0.9
MKS1-209ENST00000580127 TRAF7Q6Q0C0 670 aa20.67■□□□□ 0.9
MKS1-209ENST00000580127 METTL7BQ6UX53 244 aa20.67■□□□□ 0.9
MKS1-209ENST00000580127 SMARCC2Q8TAQ2 1214 aa20.67■□□□□ 0.9
MKS1-209ENST00000580127 KAT6AQ92794 2004 aa20.66■□□□□ 0.9
MKS1-209ENST00000580127 SPATA31C2B4DYI2 1134 aa20.66■□□□□ 0.9
MKS1-209ENST00000580127 FIBPO43427 364 aa20.66■□□□□ 0.9
MKS1-209ENST00000580127 LGALS2P05162 132 aa20.66■□□□□ 0.9
MKS1-209ENST00000580127 SMIM10L2AP0DMW4 78 aa20.66■□□□□ 0.9
MKS1-209ENST00000580127 SMIM10L2BP0DMW5 78 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms