RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-208	ENST00000580019	S100B	P04271	92 aa	Predicted RBP	4.19	□□□□□ -1.74
KPNB1-208	ENST00000580019	SSB	P05455	408 aa	Known RBP eCLIP	4.19	□□□□□ -1.74
KPNB1-208	ENST00000580019	GSN	P06396	782 aa		4.19	□□□□□ -1.74
KPNB1-208	ENST00000580019	ZNF28	P17035	718 aa		4.19	□□□□□ -1.74
KPNB1-208	ENST00000580019	BMP5	P22003	454 aa		4.19	□□□□□ -1.74
KPNB1-208	ENST00000580019	PLEKHG6	Q3KR16	790 aa		4.19	□□□□□ -1.74
KPNB1-208	ENST00000580019	CCDC84	Q86UT8	332 aa	Predicted RBP	4.19	□□□□□ -1.74
KPNB1-208	ENST00000580019	SRPK1	Q96SB4	655 aa	Known RBP	4.19	□□□□□ -1.74
KPNB1-208	ENST00000580019	SETDB2	Q96T68	719 aa		4.19	□□□□□ -1.74
KPNB1-208	ENST00000580019	FGF10	O15520	208 aa	Predicted RBP	4.18	□□□□□ -1.74
KPNB1-208	ENST00000580019	B4GALT4	O60513	344 aa		4.18	□□□□□ -1.74
KPNB1-208	ENST00000580019	PEX14	O75381	377 aa		4.18	□□□□□ -1.74
KPNB1-208	ENST00000580019	CTSH	P09668	335 aa		4.18	□□□□□ -1.74
KPNB1-208	ENST00000580019	RAG1	P15918	1043 aa		4.18	□□□□□ -1.74
KPNB1-208	ENST00000580019	L1CAM	P32004	1257 aa		4.18	□□□□□ -1.74
KPNB1-208	ENST00000580019	POU4F1	Q01851	419 aa		4.18	□□□□□ -1.74
KPNB1-208	ENST00000580019	PAK2	Q13177	524 aa		4.18	□□□□□ -1.74
KPNB1-208	ENST00000580019	PLEKHG4	Q58EX7	1191 aa		4.18	□□□□□ -1.74
KPNB1-208	ENST00000580019	TAF7L	Q5H9L4	462 aa		4.18	□□□□□ -1.74
KPNB1-208	ENST00000580019	EPHA10	Q5JZY3	1008 aa		4.18	□□□□□ -1.74
KPNB1-208	ENST00000580019	EDA	Q92838	391 aa		4.18	□□□□□ -1.74
KPNB1-208	ENST00000580019	GPRASP2	Q96D09	838 aa		4.18	□□□□□ -1.74
KPNB1-208	ENST00000580019	SEC16B	Q96JE7	1060 aa		4.18	□□□□□ -1.74
KPNB1-208	ENST00000580019	YTHDC1	Q96MU7	727 aa	Known RBP	4.18	□□□□□ -1.74
KPNB1-208	ENST00000580019	PRRX2	Q99811	253 aa		4.18	□□□□□ -1.74
KPNB1-208	ENST00000580019	SYT3	Q9BQG1	590 aa		4.18	□□□□□ -1.74
KPNB1-208	ENST00000580019	SLC12A9	Q9BXP2	914 aa		4.18	□□□□□ -1.74
KPNB1-208	ENST00000580019	GEMIN8	Q9NWZ8	242 aa	Known RBP	4.18	□□□□□ -1.74
KPNB1-208	ENST00000580019	DDX56	Q9NY93	547 aa	Known RBP	4.18	□□□□□ -1.74
KPNB1-208	ENST00000580019	PRR13	Q9NZ81	148 aa		4.18	□□□□□ -1.74
KPNB1-208	ENST00000580019	USP31	Q70CQ4	1352 aa		4.17	□□□□□ -1.74
KPNB1-208	ENST00000580019	PROB1	E7EW31	1015 aa		4.17	□□□□□ -1.74
KPNB1-208	ENST00000580019	MAK	P20794	623 aa		4.17	□□□□□ -1.74
KPNB1-208	ENST00000580019	ITGA1	P56199	1179 aa		4.17	□□□□□ -1.74
KPNB1-208	ENST00000580019	SERINC3	Q13530	473 aa		4.17	□□□□□ -1.74
KPNB1-208	ENST00000580019	TAF1C	Q15572	869 aa	Predicted RBP	4.17	□□□□□ -1.74
KPNB1-208	ENST00000580019	ETV3L	Q6ZN32	361 aa		4.17	□□□□□ -1.74
KPNB1-208	ENST00000580019	STK32C	Q86UX6	486 aa		4.17	□□□□□ -1.74
KPNB1-208	ENST00000580019	RASGRP4	Q8TDF6	673 aa		4.17	□□□□□ -1.74
KPNB1-208	ENST00000580019	ZNF764	Q96H86	408 aa	Predicted RBP	4.17	□□□□□ -1.74
KPNB1-208	ENST00000580019	TRIM55	Q9BYV6	548 aa		4.17	□□□□□ -1.74
KPNB1-208	ENST00000580019	L2HGDH	Q9H9P8	463 aa		4.17	□□□□□ -1.74
KPNB1-208	ENST00000580019	TYW1	Q9NV66	732 aa	Known RBP	4.17	□□□□□ -1.74
KPNB1-208	ENST00000580019	PCDHB12	Q9Y5F1	795 aa		4.17	□□□□□ -1.74
KPNB1-208	ENST00000580019	PLSCR1	O15162	318 aa		4.16	□□□□□ -1.74
KPNB1-208	ENST00000580019	FOXS1	O43638	330 aa		4.16	□□□□□ -1.74
KPNB1-208	ENST00000580019	TBC1D8	O95759	1140 aa		4.16	□□□□□ -1.74
KPNB1-208	ENST00000580019	C1S	P09871	688 aa		4.16	□□□□□ -1.74
KPNB1-208	ENST00000580019	MLEC	Q14165	292 aa		4.16	□□□□□ -1.74
KPNB1-208	ENST00000580019	ARSH	Q5FYA8	562 aa		4.16	□□□□□ -1.74
KPNB1-208	ENST00000580019	ZNF362	Q5T0B9	420 aa	Predicted RBP	4.16	□□□□□ -1.74
KPNB1-208	ENST00000580019	CWF19L1	Q69YN2	538 aa	Known RBP	4.16	□□□□□ -1.74
KPNB1-208	ENST00000580019	TCTN3	Q6NUS6	607 aa		4.16	□□□□□ -1.74
KPNB1-208	ENST00000580019	CD300LD	Q6UXZ3	194 aa		4.16	□□□□□ -1.74
KPNB1-208	ENST00000580019	LRP10	Q7Z4F1	713 aa		4.16	□□□□□ -1.74
KPNB1-208	ENST00000580019	CACTIN	Q8WUQ7	758 aa	Known RBP	4.16	□□□□□ -1.74
KPNB1-208	ENST00000580019	RNPC3	Q96LT9	517 aa	Known RBP	4.16	□□□□□ -1.74
KPNB1-208	ENST00000580019	SRRT	Q9BXP5	876 aa	Known RBP	4.16	□□□□□ -1.74
KPNB1-208	ENST00000580019	MMRN2	Q9H8L6	949 aa		4.16	□□□□□ -1.74
KPNB1-208	ENST00000580019	FBXL21	Q9UKT6	434 aa		4.16	□□□□□ -1.74
KPNB1-208	ENST00000580019	G3BP2	Q9UN86	482 aa	Known RBP	4.16	□□□□□ -1.74
KPNB1-208	ENST00000580019	INO80B-WBP1	J3KQ70	363 aa		4.15	□□□□□ -1.75
KPNB1-208	ENST00000580019	CDC45	O75419	566 aa		4.15	□□□□□ -1.75
KPNB1-208	ENST00000580019	CLEC3A	O75596	197 aa		4.15	□□□□□ -1.75
KPNB1-208	ENST00000580019	RLBP1	P12271	317 aa		4.15	□□□□□ -1.75
KPNB1-208	ENST00000580019	ST13	P50502	369 aa	Known RBP	4.15	□□□□□ -1.75
KPNB1-208	ENST00000580019	ANKS3	Q6ZW76	656 aa		4.15	□□□□□ -1.75
KPNB1-208	ENST00000580019	ZC3H18	Q86VM9	953 aa	Known RBP	4.15	□□□□□ -1.75
KPNB1-208	ENST00000580019	C1orf210	Q8IVY1	113 aa		4.15	□□□□□ -1.75
KPNB1-208	ENST00000580019	RPUSD2	Q8IZ73	545 aa	Known RBP	4.15	□□□□□ -1.75
KPNB1-208	ENST00000580019	KLHL36	Q8N4N3	616 aa		4.15	□□□□□ -1.75
KPNB1-208	ENST00000580019	LZTR1	Q8N653	840 aa		4.15	□□□□□ -1.75
KPNB1-208	ENST00000580019	PRPF38A	Q8NAV1	312 aa	Known RBP	4.15	□□□□□ -1.75
KPNB1-208	ENST00000580019	ZNF483	Q8TF39	744 aa	Predicted RBP	4.15	□□□□□ -1.75
KPNB1-208	ENST00000580019	APPBP2	Q92624	585 aa		4.15	□□□□□ -1.75
KPNB1-208	ENST00000580019	ZNF512B	Q96KM6	892 aa	Predicted RBP	4.15	□□□□□ -1.75
KPNB1-208	ENST00000580019	PLEKHG4B	Q96PX9	1271 aa		4.15	□□□□□ -1.75
KPNB1-208	ENST00000580019	DSCC1	Q9BVC3	393 aa		4.15	□□□□□ -1.75
KPNB1-208	ENST00000580019	BRIP1	Q9BX63	1249 aa		4.15	□□□□□ -1.75
KPNB1-208	ENST00000580019	INO80B	Q9C086	356 aa	Predicted RBP	4.15	□□□□□ -1.75
KPNB1-208	ENST00000580019	SEC61A2	Q9H9S3	476 aa		4.15	□□□□□ -1.75
KPNB1-208	ENST00000580019	R3HCC1	Q9Y3T6	440 aa	Known RBP	4.15	□□□□□ -1.75
KPNB1-208	ENST00000580019	FAM221A	A4D161	298 aa		4.14	□□□□□ -1.75
KPNB1-208	ENST00000580019	PDGFRB	P09619	1106 aa		4.14	□□□□□ -1.75
KPNB1-208	ENST00000580019	IL13	P35225	146 aa		4.14	□□□□□ -1.75
KPNB1-208	ENST00000580019	TUBA3C	Q13748	450 aa		4.14	□□□□□ -1.75
KPNB1-208	ENST00000580019	TUBA3E	Q6PEY2	450 aa		4.14	□□□□□ -1.75
KPNB1-208	ENST00000580019	BNC2	Q6ZN30	1099 aa	Predicted RBP	4.14	□□□□□ -1.75
KPNB1-208	ENST00000580019	ZNF627	Q7L945	461 aa		4.14	□□□□□ -1.75
KPNB1-208	ENST00000580019	FMNL3	Q8IVF7	1028 aa		4.14	□□□□□ -1.75
KPNB1-208	ENST00000580019	CCDC146	Q8IYE0	955 aa		4.14	□□□□□ -1.75
KPNB1-208	ENST00000580019	FAM26E	Q8N5C1	309 aa		4.14	□□□□□ -1.75
KPNB1-208	ENST00000580019	PMM1	Q92871	262 aa		4.14	□□□□□ -1.75
KPNB1-208	ENST00000580019	PTCHD1	Q96NR3	888 aa		4.14	□□□□□ -1.75
KPNB1-208	ENST00000580019	GNRHR2	Q96P88	292 aa		4.14	□□□□□ -1.75
KPNB1-208	ENST00000580019	UBA5	Q9GZZ9	404 aa		4.14	□□□□□ -1.75
KPNB1-208	ENST00000580019	ZNF408	Q9H9D4	720 aa		4.14	□□□□□ -1.75
KPNB1-208	ENST00000580019	ADARB2	Q9NS39	739 aa	Known RBP	4.14	□□□□□ -1.75
KPNB1-208	ENST00000580019	PTGFRN	Q9P2B2	879 aa		4.14	□□□□□ -1.75
KPNB1-208	ENST00000580019	STRIP2	Q9ULQ0	834 aa		4.14	□□□□□ -1.75

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