RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-208ENST00000578501 LAMC2Q13753 1193 aa15.67■□□□□ 0.1
CSNK1D-208ENST00000578501 NTRK3Q16288 839 aa15.67■□□□□ 0.1
CSNK1D-208ENST00000578501 PFKFB3Q16875 520 aaPredicted RBP15.67■□□□□ 0.1
CSNK1D-208ENST00000578501 GNPTABQ3T906 1256 aa15.67■□□□□ 0.1
CSNK1D-208ENST00000578501 GPKOWQ92917 476 aaPredicted RBP eCLIP15.67■□□□□ 0.1
CSNK1D-208ENST00000578501 TRIM43Q96BQ3 446 aaPredicted RBP15.67■□□□□ 0.1
CSNK1D-208ENST00000578501 RNPC3Q96LT9 517 aaKnown RBP15.67■□□□□ 0.1
CSNK1D-208ENST00000578501 INPP4AQ96PE3 977 aaPredicted RBP15.67■□□□□ 0.1
CSNK1D-208ENST00000578501 MTG1Q9BT17 334 aaPredicted RBP15.67■□□□□ 0.1
CSNK1D-208ENST00000578501 UPF3BQ9BZI7 483 aaKnown RBP15.67■□□□□ 0.1
CSNK1D-208ENST00000578501 RIC8AQ9NPQ8 531 aa15.67■□□□□ 0.1
CSNK1D-208ENST00000578501 PDRG1Q9NUG6 133 aa15.67■□□□□ 0.1
CSNK1D-208ENST00000578501 TTC28Q96AY4 2481 aa15.67■□□□□ 0.1
CSNK1D-208ENST00000578501 CD4P01730 458 aa15.66■□□□□ 0.1
CSNK1D-208ENST00000578501 SCG2P13521 617 aa15.66■□□□□ 0.1
CSNK1D-208ENST00000578501 IFNAR1P17181 557 aa15.66■□□□□ 0.1
CSNK1D-208ENST00000578501 NAPAP54920 295 aa15.66■□□□□ 0.1
CSNK1D-208ENST00000578501 TYW1BQ6NUM6 668 aa15.66■□□□□ 0.1
CSNK1D-208ENST00000578501 SH3RF1Q7Z6J0 888 aa15.66■□□□□ 0.1
CSNK1D-208ENST00000578501 FAM126BQ8IXS8 530 aa15.66■□□□□ 0.1
CSNK1D-208ENST00000578501 AFG1LQ8WV93 481 aa15.66■□□□□ 0.1
CSNK1D-208ENST00000578501 RNF26Q9BY78 433 aaPredicted RBP15.66■□□□□ 0.1
CSNK1D-208ENST00000578501 TMEM39AQ9NV64 488 aa15.66■□□□□ 0.1
CSNK1D-208ENST00000578501 SPTBN5Q9NRC6 3674 aaKnown RBP15.65■□□□□ 0.1
CSNK1D-208ENST00000578501 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.65■□□□□ 0.1
CSNK1D-208ENST00000578501 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.65■□□□□ 0.1
CSNK1D-208ENST00000578501 SPDYE3A6NKU9 549 aa15.65■□□□□ 0.1
CSNK1D-208ENST00000578501 SPATA31C2B4DYI2 1134 aa15.65■□□□□ 0.1
CSNK1D-208ENST00000578501 TLR3O15455 904 aaKnown RBP15.65■□□□□ 0.1
CSNK1D-208ENST00000578501 FOSP01100 380 aaPredicted RBP15.65■□□□□ 0.1
CSNK1D-208ENST00000578501 MYL3P08590 195 aa15.65■□□□□ 0.1
CSNK1D-208ENST00000578501 CELF3Q5SZQ8 465 aaKnown RBP15.65■□□□□ 0.1
CSNK1D-208ENST00000578501 MYSM1Q5VVJ2 828 aa15.65■□□□□ 0.1
CSNK1D-208ENST00000578501 PPTC7Q8NI37 304 aa15.65■□□□□ 0.1
CSNK1D-208ENST00000578501 ATXN2LQ8WWM7 1075 aaKnown RBP15.65■□□□□ 0.1
CSNK1D-208ENST00000578501 FAM122AQ96E09 287 aa15.65■□□□□ 0.1
CSNK1D-208ENST00000578501 EHMT1Q9H9B1 1298 aa15.65■□□□□ 0.1
CSNK1D-208ENST00000578501 TBX21Q9UL17 535 aa15.65■□□□□ 0.1
CSNK1D-208ENST00000578501 PCDHA6Q9UN73 950 aa15.65■□□□□ 0.1
CSNK1D-208ENST00000578501 PCDHA8Q9Y5H6 950 aa15.65■□□□□ 0.1
CSNK1D-208ENST00000578501 ESYT2A0FGR8 921 aa15.64■□□□□ 0.09
CSNK1D-208ENST00000578501 SMCO2A6NFE2 343 aa15.64■□□□□ 0.09
CSNK1D-208ENST00000578501 FIBPO43427 364 aa15.64■□□□□ 0.09
CSNK1D-208ENST00000578501 MMP3P08254 477 aa15.64■□□□□ 0.09
CSNK1D-208ENST00000578501 HOXD8P13378 290 aaPredicted RBP15.64■□□□□ 0.09
CSNK1D-208ENST00000578501 PLA2G5P39877 138 aa15.64■□□□□ 0.09
CSNK1D-208ENST00000578501 ADCY7P51828 1080 aa15.64■□□□□ 0.09
CSNK1D-208ENST00000578501 PSMC6P62333 389 aa15.64■□□□□ 0.09
CSNK1D-208ENST00000578501 AKAP17AQ02040 695 aaKnown RBP15.64■□□□□ 0.09
CSNK1D-208ENST00000578501 SP2Q02086 613 aa15.64■□□□□ 0.09
CSNK1D-208ENST00000578501 PKN1Q16512 942 aa15.64■□□□□ 0.09
CSNK1D-208ENST00000578501 DGKDQ16760 1214 aa15.64■□□□□ 0.09
CSNK1D-208ENST00000578501 UBE2SQ16763 222 aa15.64■□□□□ 0.09
CSNK1D-208ENST00000578501 NFRKBQ6P4R8 1299 aa15.64■□□□□ 0.09
CSNK1D-208ENST00000578501 DHX37Q8IY37 1157 aaKnown RBP15.64■□□□□ 0.09
CSNK1D-208ENST00000578501 CCDC12Q8WUD4 166 aaPredicted RBP15.64■□□□□ 0.09
CSNK1D-208ENST00000578501 SENP7Q9BQF6 1050 aa15.64■□□□□ 0.09
CSNK1D-208ENST00000578501 PPFIA4O75335 1185 aa15.63■□□□□ 0.09
CSNK1D-208ENST00000578501 SEC24BO95487 1268 aa15.63■□□□□ 0.09
CSNK1D-208ENST00000578501 TIMP1P01033 207 aa15.63■□□□□ 0.09
CSNK1D-208ENST00000578501 RAG1P15918 1043 aa15.63■□□□□ 0.09
CSNK1D-208ENST00000578501 UBA1P22314 1058 aaKnown RBP15.63■□□□□ 0.09
CSNK1D-208ENST00000578501 CLK2P49760 499 aaKnown RBP15.63■□□□□ 0.09
CSNK1D-208ENST00000578501 CCT2P78371 535 aaKnown RBP15.63■□□□□ 0.09
CSNK1D-208ENST00000578501 PTPN11Q06124 597 aaPredicted RBP15.63■□□□□ 0.09
CSNK1D-208ENST00000578501 AP3B2Q13367 1082 aa15.63■□□□□ 0.09
CSNK1D-208ENST00000578501 NEDD9Q14511 834 aa15.63■□□□□ 0.09
CSNK1D-208ENST00000578501 GRIN2CQ14957 1233 aa15.63■□□□□ 0.09
CSNK1D-208ENST00000578501 ANKRD1Q15327 319 aa15.63■□□□□ 0.09
CSNK1D-208ENST00000578501 NLRX1Q86UT6 975 aa15.63■□□□□ 0.09
CSNK1D-208ENST00000578501 PHKBQ93100 1093 aa15.63■□□□□ 0.09
CSNK1D-208ENST00000578501 CDHR1Q96JP9 859 aa15.63■□□□□ 0.09
CSNK1D-208ENST00000578501 ZMYND12Q9H0C1 365 aa15.63■□□□□ 0.09
CSNK1D-208ENST00000578501 NCOA5Q9HCD5 579 aaKnown RBP15.63■□□□□ 0.09
CSNK1D-208ENST00000578501 RTEL1Q9NZ71 1219 aa15.63■□□□□ 0.09
CSNK1D-208ENST00000578501 MAFGO15525 162 aa15.62■□□□□ 0.09
CSNK1D-208ENST00000578501 GGPS1O95749 300 aa15.62■□□□□ 0.09
CSNK1D-208ENST00000578501 DNAJB2P25686 324 aa15.62■□□□□ 0.09
CSNK1D-208ENST00000578501 ITGB8P26012 769 aa15.62■□□□□ 0.09
CSNK1D-208ENST00000578501 SEMA3FQ13275 785 aa15.62■□□□□ 0.09
CSNK1D-208ENST00000578501 MCTP2Q6DN12 878 aa15.62■□□□□ 0.09
CSNK1D-208ENST00000578501 METTL7BQ6UX53 244 aa15.62■□□□□ 0.09
CSNK1D-208ENST00000578501 SESTD1Q86VW0 696 aa15.62■□□□□ 0.09
CSNK1D-208ENST00000578501 GIMAP8Q8ND71 665 aaPredicted RBP15.62■□□□□ 0.09
CSNK1D-208ENST00000578501 GPRASP2Q96D09 838 aa15.62■□□□□ 0.09
CSNK1D-208ENST00000578501 ZFP91Q96JP5 570 aaPredicted RBP15.62■□□□□ 0.09
CSNK1D-208ENST00000578501 SPATA33Q96N06 139 aa15.62■□□□□ 0.09
CSNK1D-208ENST00000578501 GAS2L1Q99501 681 aaPredicted RBP15.62■□□□□ 0.09
CSNK1D-208ENST00000578501 SLC26A6Q9BXS9 759 aa15.62■□□□□ 0.09
CSNK1D-208ENST00000578501 ZNF576Q9H609 170 aa15.62■□□□□ 0.09
CSNK1D-208ENST00000578501 MLXIPQ9HAP2 919 aa15.62■□□□□ 0.09
CSNK1D-208ENST00000578501 UBIAD1Q9Y5Z9 338 aa15.62■□□□□ 0.09
CSNK1D-208ENST00000578501 SCN10AQ9Y5Y9 1956 aa15.62■□□□□ 0.09
CSNK1D-208ENST00000578501 CPLX1O14810 134 aa15.61■□□□□ 0.09
CSNK1D-208ENST00000578501 B4GALT4O60513 344 aa15.61■□□□□ 0.09
CSNK1D-208ENST00000578501 SUPT20HL2P0C7V6 817 aa15.61■□□□□ 0.09
CSNK1D-208ENST00000578501 ITGB5P18084 799 aa15.61■□□□□ 0.09
CSNK1D-208ENST00000578501 GNA11P29992 359 aa15.61■□□□□ 0.09
CSNK1D-208ENST00000578501 FPGSQ05932 587 aa15.61■□□□□ 0.09
CSNK1D-208ENST00000578501 NBPF20Q3BBV1 942 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms