RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 ALDH5A1P51649 535 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC8-204ENST00000578252 USP11P51784 963 aa12.74□□□□□ -0.37
TRAPPC8-204ENST00000578252 ARHGAP4P98171 946 aa12.74□□□□□ -0.37
TRAPPC8-204ENST00000578252 CNTN2Q02246 1040 aa12.74□□□□□ -0.37
TRAPPC8-204ENST00000578252 PKP1Q13835 747 aa12.74□□□□□ -0.37
TRAPPC8-204ENST00000578252 ZNF792Q3KQV3 632 aa12.74□□□□□ -0.37
TRAPPC8-204ENST00000578252 PCNX4Q63HM2 1172 aa12.74□□□□□ -0.37
TRAPPC8-204ENST00000578252 ATL3Q6DD88 541 aa12.74□□□□□ -0.37
TRAPPC8-204ENST00000578252 MOXD1Q6UVY6 613 aa12.74□□□□□ -0.37
TRAPPC8-204ENST00000578252 NEK8Q86SG6 692 aa12.74□□□□□ -0.37
TRAPPC8-204ENST00000578252 TRMT44Q8IYL2 757 aaKnown RBP12.74□□□□□ -0.37
TRAPPC8-204ENST00000578252 CD99L2Q8TCZ2 262 aa12.74□□□□□ -0.37
TRAPPC8-204ENST00000578252 USP6NLQ92738 828 aa12.74□□□□□ -0.37
TRAPPC8-204ENST00000578252 TAAR1Q96RJ0 339 aa12.74□□□□□ -0.37
TRAPPC8-204ENST00000578252 APBA2Q99767 749 aa12.74□□□□□ -0.37
TRAPPC8-204ENST00000578252 PDCD2LQ9BRP1 358 aa12.74□□□□□ -0.37
TRAPPC8-204ENST00000578252 DOCK3Q8IZD9 2030 aa12.74□□□□□ -0.37
TRAPPC8-204ENST00000578252 SOWAHBA6NEL2 793 aa12.73□□□□□ -0.37
TRAPPC8-204ENST00000578252 ADAMTS3O15072 1205 aa12.73□□□□□ -0.37
TRAPPC8-204ENST00000578252 XRCC5P13010 732 aaKnown RBP12.73□□□□□ -0.37
TRAPPC8-204ENST00000578252 EDNRBP24530 442 aa12.73□□□□□ -0.37
TRAPPC8-204ENST00000578252 IRF5Q13568 498 aa12.73□□□□□ -0.37
TRAPPC8-204ENST00000578252 PGM5Q15124 567 aa12.73□□□□□ -0.37
TRAPPC8-204ENST00000578252 INF2Q27J81 1249 aa12.73□□□□□ -0.37
TRAPPC8-204ENST00000578252 MYSM1Q5VVJ2 828 aa12.73□□□□□ -0.37
TRAPPC8-204ENST00000578252 CRYGNQ8WXF5 182 aa12.73□□□□□ -0.37
TRAPPC8-204ENST00000578252 PGBD1Q96JS3 809 aa12.73□□□□□ -0.37
TRAPPC8-204ENST00000578252 ZNF396Q96N95 335 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC8-204ENST00000578252 HCSTQ9UBK5 93 aa12.73□□□□□ -0.37
TRAPPC8-204ENST00000578252 SRRDQ9UH36 339 aa12.73□□□□□ -0.37
TRAPPC8-204ENST00000578252 GJD2Q9UKL4 321 aa12.73□□□□□ -0.37
TRAPPC8-204ENST00000578252 ZDHHC9Q9Y397 364 aa12.73□□□□□ -0.37
TRAPPC8-204ENST00000578252 SYNGAP1Q96PV0 1343 aa12.72□□□□□ -0.37
TRAPPC8-204ENST00000578252 COBLO75128 1261 aa12.72□□□□□ -0.37
TRAPPC8-204ENST00000578252 BMP15O95972 392 aa12.72□□□□□ -0.37
TRAPPC8-204ENST00000578252 NR3C2P08235 984 aa12.72□□□□□ -0.37
TRAPPC8-204ENST00000578252 CTGFP29279 349 aa12.72□□□□□ -0.37
TRAPPC8-204ENST00000578252 CIITAP33076 1130 aa12.72□□□□□ -0.37
TRAPPC8-204ENST00000578252 PDE4DQ08499 809 aa12.72□□□□□ -0.37
TRAPPC8-204ENST00000578252 STXBP2Q15833 593 aa12.72□□□□□ -0.37
TRAPPC8-204ENST00000578252 EARS2Q5JPH6 523 aaKnown RBP12.72□□□□□ -0.37
TRAPPC8-204ENST00000578252 FOXD4L5Q5VV16 416 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC8-204ENST00000578252 OLFML2BQ68BL8 750 aa12.72□□□□□ -0.37
TRAPPC8-204ENST00000578252 PPP4R3AQ6IN85 833 aa12.72□□□□□ -0.37
TRAPPC8-204ENST00000578252 MAMDC4Q6UXC1 1216 aa12.72□□□□□ -0.37
TRAPPC8-204ENST00000578252 NIPA1Q7RTP0 329 aa12.72□□□□□ -0.37
TRAPPC8-204ENST00000578252 VSIG10LQ86VR7 867 aa12.72□□□□□ -0.37
TRAPPC8-204ENST00000578252 MORC4Q8TE76 937 aa12.72□□□□□ -0.37
TRAPPC8-204ENST00000578252 FOXD4L4Q8WXT5 416 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC8-204ENST00000578252 MAML3Q96JK9 1138 aa12.72□□□□□ -0.37
TRAPPC8-204ENST00000578252 ARHGAP39Q9C0H5 1083 aa12.72□□□□□ -0.37
TRAPPC8-204ENST00000578252 KIAA1217Q5T5P2 1943 aa12.72□□□□□ -0.37
TRAPPC8-204ENST00000578252 CEP350Q5VT06 3117 aa12.71□□□□□ -0.37
TRAPPC8-204ENST00000578252 ASTN1O14525 1302 aa12.71□□□□□ -0.37
TRAPPC8-204ENST00000578252 CYP3A7-CYP3A51PA0A087WV96 503 aa12.71□□□□□ -0.37
TRAPPC8-204ENST00000578252 GRXCR2A6NFK2 248 aa12.71□□□□□ -0.37
TRAPPC8-204ENST00000578252 MAP3K7O43318 606 aa12.71□□□□□ -0.37
TRAPPC8-204ENST00000578252 EIF3JO75822 258 aaKnown RBP12.71□□□□□ -0.37
TRAPPC8-204ENST00000578252 CYP3A7P24462 503 aa12.71□□□□□ -0.37
TRAPPC8-204ENST00000578252 ZNF76P36508 570 aa12.71□□□□□ -0.37
TRAPPC8-204ENST00000578252 CTCFP49711 727 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC8-204ENST00000578252 SETQ01105 290 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC8-204ENST00000578252 LETM2Q2VYF4 491 aa12.71□□□□□ -0.37
TRAPPC8-204ENST00000578252 GNPTABQ3T906 1256 aa12.71□□□□□ -0.37
TRAPPC8-204ENST00000578252 TTC38Q5R3I4 469 aa12.71□□□□□ -0.37
TRAPPC8-204ENST00000578252 CDHR1Q96JP9 859 aa12.71□□□□□ -0.37
TRAPPC8-204ENST00000578252 FGD4Q96M96 766 aa12.71□□□□□ -0.37
TRAPPC8-204ENST00000578252 TSKSQ9UJT2 592 aa12.71□□□□□ -0.37
TRAPPC8-204ENST00000578252 CFAP45Q9UL16 551 aa12.71□□□□□ -0.37
TRAPPC8-204ENST00000578252 CEP131Q9UPN4 1083 aa12.71□□□□□ -0.37
TRAPPC8-204ENST00000578252 MAFGO15525 162 aa12.7□□□□□ -0.38
TRAPPC8-204ENST00000578252 CCNT1O60563 726 aaKnown RBP12.7□□□□□ -0.38
TRAPPC8-204ENST00000578252 HSPA1AP0DMV8 641 aaKnown RBP12.7□□□□□ -0.38
TRAPPC8-204ENST00000578252 HSPA1BP0DMV9 641 aaKnown RBP12.7□□□□□ -0.38
TRAPPC8-204ENST00000578252 HSPA8P11142 646 aaKnown RBP12.7□□□□□ -0.38
TRAPPC8-204ENST00000578252 MYCLP12524 364 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC8-204ENST00000578252 CYP2B6P20813 491 aa12.7□□□□□ -0.38
TRAPPC8-204ENST00000578252 FLT3LGP49771 235 aa12.7□□□□□ -0.38
TRAPPC8-204ENST00000578252 UBXN2AP68543 259 aa12.7□□□□□ -0.38
TRAPPC8-204ENST00000578252 PLCB2Q00722 1185 aa12.7□□□□□ -0.38
TRAPPC8-204ENST00000578252 PRKCZQ05513 592 aa12.7□□□□□ -0.38
TRAPPC8-204ENST00000578252 CEP55Q53EZ4 464 aa12.7□□□□□ -0.38
TRAPPC8-204ENST00000578252 NLRX1Q86UT6 975 aa12.7□□□□□ -0.38
TRAPPC8-204ENST00000578252 NPLOC4Q8TAT6 608 aa12.7□□□□□ -0.38
TRAPPC8-204ENST00000578252 MBOAT7Q96N66 472 aa12.7□□□□□ -0.38
TRAPPC8-204ENST00000578252 INPP4AQ96PE3 977 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC8-204ENST00000578252 PURBQ96QR8 312 aaKnown RBP12.7□□□□□ -0.38
TRAPPC8-204ENST00000578252 TINF2Q9BSI4 451 aa12.7□□□□□ -0.38
TRAPPC8-204ENST00000578252 VTA1Q9NP79 307 aa12.7□□□□□ -0.38
TRAPPC8-204ENST00000578252 MCM3APO60318 1980 aa12.7□□□□□ -0.38
TRAPPC8-204ENST00000578252 MEIS1O00470 390 aa12.69□□□□□ -0.38
TRAPPC8-204ENST00000578252 LAD1O00515 517 aa12.69□□□□□ -0.38
TRAPPC8-204ENST00000578252 FOXN1O15353 648 aa12.69□□□□□ -0.38
TRAPPC8-204ENST00000578252 TOB1P50616 345 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC8-204ENST00000578252 KRT85P78386 507 aa12.69□□□□□ -0.38
TRAPPC8-204ENST00000578252 MRPS9P82933 396 aaKnown RBP12.69□□□□□ -0.38
TRAPPC8-204ENST00000578252 TSR1Q2NL82 804 aaKnown RBP12.69□□□□□ -0.38
TRAPPC8-204ENST00000578252 Q4G0T1 1027 aa12.69□□□□□ -0.38
TRAPPC8-204ENST00000578252 MFSD14CQ5VZR4 134 aa12.69□□□□□ -0.38
TRAPPC8-204ENST00000578252 KCNV1Q6PIU1 500 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms