RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 ALG1Q9BT22 464 aa17.83■□□□□ 0.44
SF3B3-215ENST00000577085 EHMT1Q9H9B1 1298 aa17.83■□□□□ 0.44
SF3B3-215ENST00000577085 MTMR10Q9NXD2 777 aa17.83■□□□□ 0.44
SF3B3-215ENST00000577085 BRPF3Q9ULD4 1205 aa17.83■□□□□ 0.44
SF3B3-215ENST00000577085 FRMPD4Q14CM0 1322 aa17.82■□□□□ 0.44
SF3B3-215ENST00000577085 CCDC196A0A1B0GTZ2 297 aa17.82■□□□□ 0.44
SF3B3-215ENST00000577085 MEIS2O14770 477 aa17.82■□□□□ 0.44
SF3B3-215ENST00000577085 FIBPO43427 364 aa17.82■□□□□ 0.44
SF3B3-215ENST00000577085 PPFIA4O75335 1185 aa17.82■□□□□ 0.44
SF3B3-215ENST00000577085 ZNF286BP0CG31 522 aa17.82■□□□□ 0.44
SF3B3-215ENST00000577085 NAPAP54920 295 aa17.82■□□□□ 0.44
SF3B3-215ENST00000577085 NEDD9Q14511 834 aa17.82■□□□□ 0.44
SF3B3-215ENST00000577085 MFSD10Q14728 455 aa17.82■□□□□ 0.44
SF3B3-215ENST00000577085 PCNX4Q63HM2 1172 aa17.82■□□□□ 0.44
SF3B3-215ENST00000577085 GPKOWQ92917 476 aaPredicted RBP eCLIP17.82■□□□□ 0.44
SF3B3-215ENST00000577085 SCLYQ96I15 445 aa17.82■□□□□ 0.44
SF3B3-215ENST00000577085 WNT8AQ9H1J5 351 aa17.82■□□□□ 0.44
SF3B3-215ENST00000577085 PPP4R2Q9NY27 417 aa17.82■□□□□ 0.44
SF3B3-215ENST00000577085 CENPBP07199 599 aaPredicted RBP17.81■□□□□ 0.44
SF3B3-215ENST00000577085 PSEN2P49810 448 aa17.81■□□□□ 0.44
SF3B3-215ENST00000577085 METAP2P50579 478 aaKnown RBP eCLIP17.81■□□□□ 0.44
SF3B3-215ENST00000577085 MRPS9P82933 396 aaKnown RBP17.81■□□□□ 0.44
SF3B3-215ENST00000577085 KIAA0753Q2KHM9 967 aa17.81■□□□□ 0.44
SF3B3-215ENST00000577085 HSDL1Q3SXM5 330 aa17.81■□□□□ 0.44
SF3B3-215ENST00000577085 Q6ZUG5 572 aa17.81■□□□□ 0.44
SF3B3-215ENST00000577085 C16orf59Q7L2K0 433 aa17.81■□□□□ 0.44
SF3B3-215ENST00000577085 OTOP2Q7RTS6 562 aa17.81■□□□□ 0.44
SF3B3-215ENST00000577085 INPP4AQ96PE3 977 aaPredicted RBP17.81■□□□□ 0.44
SF3B3-215ENST00000577085 STXBP5LQ9Y2K9 1186 aa17.81■□□□□ 0.44
SF3B3-215ENST00000577085 SNX14Q9Y5W7 946 aa17.81■□□□□ 0.44
SF3B3-215ENST00000577085 LAMA2P24043 3122 aaKnown RBP17.81■□□□□ 0.44
SF3B3-215ENST00000577085 SPATA31C2B4DYI2 1134 aa17.8■□□□□ 0.44
SF3B3-215ENST00000577085 PITPNM1O00562 1244 aa17.8■□□□□ 0.44
SF3B3-215ENST00000577085 F2P00734 622 aa17.8■□□□□ 0.44
SF3B3-215ENST00000577085 PFKMP08237 780 aa17.8■□□□□ 0.44
SF3B3-215ENST00000577085 CPA1P15085 419 aa17.8■□□□□ 0.44
SF3B3-215ENST00000577085 RCAN1P53805 252 aa17.8■□□□□ 0.44
SF3B3-215ENST00000577085 SP2Q02086 613 aa17.8■□□□□ 0.44
SF3B3-215ENST00000577085 UBE2SQ16763 222 aa17.8■□□□□ 0.44
SF3B3-215ENST00000577085 DEFB128Q7Z7B8 93 aa17.8■□□□□ 0.44
SF3B3-215ENST00000577085 SESTD1Q86VW0 696 aa17.8■□□□□ 0.44
SF3B3-215ENST00000577085 GIMAP8Q8ND71 665 aaPredicted RBP17.8■□□□□ 0.44
SF3B3-215ENST00000577085 KAT2BQ92831 832 aa17.8■□□□□ 0.44
SF3B3-215ENST00000577085 BRF1Q92994 677 aa17.8■□□□□ 0.44
SF3B3-215ENST00000577085 CDHR1Q96JP9 859 aa17.8■□□□□ 0.44
SF3B3-215ENST00000577085 V9GY48 417 aaPredicted RBP17.8■□□□□ 0.44
SF3B3-215ENST00000577085 CNTNAP5Q8WYK1 1306 aa17.79■□□□□ 0.44
SF3B3-215ENST00000577085 ZBBXA8MT70 800 aa17.79■□□□□ 0.44
SF3B3-215ENST00000577085 hCG_1984214I3L0E3 225 aa17.79■□□□□ 0.44
SF3B3-215ENST00000577085 ACTN1P12814 892 aa17.79■□□□□ 0.44
SF3B3-215ENST00000577085 ICAM3P32942 547 aa17.79■□□□□ 0.44
SF3B3-215ENST00000577085 RFC2P35250 354 aa17.79■□□□□ 0.44
SF3B3-215ENST00000577085 APOBRQ0VD83 1088 aa17.79■□□□□ 0.44
SF3B3-215ENST00000577085 ERICH6BQ5W0A0 696 aa17.79■□□□□ 0.44
SF3B3-215ENST00000577085 WWC2Q6AWC2 1192 aa17.79■□□□□ 0.44
SF3B3-215ENST00000577085 GDF6Q6KF10 455 aaPredicted RBP17.79■□□□□ 0.44
SF3B3-215ENST00000577085 PPP1R18Q6NYC8 613 aa17.79■□□□□ 0.44
SF3B3-215ENST00000577085 METTL7BQ6UX53 244 aa17.79■□□□□ 0.44
SF3B3-215ENST00000577085 CYFIP1Q7L576 1253 aa17.79■□□□□ 0.44
SF3B3-215ENST00000577085 ZNF713Q8N859 430 aaPredicted RBP17.79■□□□□ 0.44
SF3B3-215ENST00000577085 CAGE1Q8TC20 777 aa17.79■□□□□ 0.44
SF3B3-215ENST00000577085 HERVK_113Q902F9 699 aa17.79■□□□□ 0.44
SF3B3-215ENST00000577085 KCNB2Q92953 911 aa17.79■□□□□ 0.44
SF3B3-215ENST00000577085 FTOQ9C0B1 505 aaKnown RBP eCLIP17.79■□□□□ 0.44
SF3B3-215ENST00000577085 SEMA6BQ9H3T3 888 aa17.79■□□□□ 0.44
SF3B3-215ENST00000577085 HDAC6Q9UBN7 1215 aa17.79■□□□□ 0.44
SF3B3-215ENST00000577085 GTF2IRD1Q9UHL9 959 aa17.79■□□□□ 0.44
SF3B3-215ENST00000577085 SCN10AQ9Y5Y9 1956 aa17.79■□□□□ 0.44
SF3B3-215ENST00000577085 TMEM265A0A087WTH1 108 aa17.78■□□□□ 0.44
SF3B3-215ENST00000577085 RPS6KB1P23443 525 aa17.78■□□□□ 0.44
SF3B3-215ENST00000577085 DNAJB2P25686 324 aa17.78■□□□□ 0.44
SF3B3-215ENST00000577085 ADCY7P51828 1080 aa17.78■□□□□ 0.44
SF3B3-215ENST00000577085 AKAP17AQ02040 695 aaKnown RBP17.78■□□□□ 0.44
SF3B3-215ENST00000577085 SP4Q02446 784 aa17.78■□□□□ 0.44
SF3B3-215ENST00000577085 TIFAQ96CG3 184 aa17.78■□□□□ 0.44
SF3B3-215ENST00000577085 GLT8D2Q9H1C3 349 aa17.78■□□□□ 0.44
SF3B3-215ENST00000577085 PCDHA6Q9UN73 950 aa17.78■□□□□ 0.44
SF3B3-215ENST00000577085 PCDHA8Q9Y5H6 950 aa17.78■□□□□ 0.44
SF3B3-215ENST00000577085 SLC4A7Q9Y6M7 1214 aa17.78■□□□□ 0.44
SF3B3-215ENST00000577085 H3BRB1 525 aa17.77■□□□□ 0.44
SF3B3-215ENST00000577085 EPB41L2O43491 1005 aaKnown RBP17.77■□□□□ 0.44
SF3B3-215ENST00000577085 IQCF3P0C7M6 154 aa17.77■□□□□ 0.44
SF3B3-215ENST00000577085 MTMR1Q13613 665 aa17.77■□□□□ 0.44
SF3B3-215ENST00000577085 TEX2Q8IWB9 1127 aa17.77■□□□□ 0.44
SF3B3-215ENST00000577085 AFAP1L1Q8TED9 768 aa17.77■□□□□ 0.44
SF3B3-215ENST00000577085 GPRASP2Q96D09 838 aa17.77■□□□□ 0.44
SF3B3-215ENST00000577085 USP26Q9BXU7 913 aa17.77■□□□□ 0.44
SF3B3-215ENST00000577085 TUT1Q9H6E5 874 aaKnown RBP17.77■□□□□ 0.44
SF3B3-215ENST00000577085 RIC8AQ9NPQ8 531 aa17.77■□□□□ 0.44
SF3B3-215ENST00000577085 MSRAQ9UJ68 235 aa17.77■□□□□ 0.44
SF3B3-215ENST00000577085 ZNF215Q9UL58 517 aaPredicted RBP17.77■□□□□ 0.44
SF3B3-215ENST00000577085 SMCO2A6NFE2 343 aa17.76■□□□□ 0.43
SF3B3-215ENST00000577085 LGALS2P05162 132 aa17.76■□□□□ 0.43
SF3B3-215ENST00000577085 HOXD8P13378 290 aaPredicted RBP17.76■□□□□ 0.43
SF3B3-215ENST00000577085 CDC27P30260 824 aa17.76■□□□□ 0.43
SF3B3-215ENST00000577085 ADD1P35611 737 aaKnown RBP17.76■□□□□ 0.43
SF3B3-215ENST00000577085 RAB30Q15771 203 aa17.76■□□□□ 0.43
SF3B3-215ENST00000577085 RASIP1Q5U651 963 aa17.76■□□□□ 0.43
SF3B3-215ENST00000577085 CCDC12Q8WUD4 166 aaPredicted RBP17.76■□□□□ 0.43
SF3B3-215ENST00000577085 GUCD1Q96NT3 240 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms