RNA–Protein interactions for RNA: ENST00000575515.1

NDC80-204, Transcript of NDC80, kinetochore complex component, humanhuman

TSL 5

Gene NDC80, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC80-204ENST00000575515 ZMYM1Q5SVZ6 1142 aa11.64□□□□□ -0.55
NDC80-204ENST00000575515 SLC30A10Q6XR72 485 aa11.64□□□□□ -0.55
NDC80-204ENST00000575515 SUGP1Q8IWZ8 645 aaKnown RBP11.64□□□□□ -0.55
NDC80-204ENST00000575515 MYOCDQ8IZQ8 938 aa11.64□□□□□ -0.55
NDC80-204ENST00000575515 NEDD1Q8NHV4 660 aa11.64□□□□□ -0.55
NDC80-204ENST00000575515 IL17RAQ96F46 866 aa11.64□□□□□ -0.55
NDC80-204ENST00000575515 SAMD11Q96NU1 681 aa11.64□□□□□ -0.55
NDC80-204ENST00000575515 NSUN3Q9H649 340 aaKnown RBP11.64□□□□□ -0.55
NDC80-204ENST00000575515 STX8Q9UNK0 236 aa11.64□□□□□ -0.55
NDC80-204ENST00000575515 SNX14Q9Y5W7 946 aa11.64□□□□□ -0.55
NDC80-204ENST00000575515 U3KPZ7 1027 aaPredicted RBP11.64□□□□□ -0.55
NDC80-204ENST00000575515 TRIOO75962 3097 aa11.63□□□□□ -0.55
NDC80-204ENST00000575515 C5orf42Q9H799 3197 aa11.63□□□□□ -0.55
NDC80-204ENST00000575515 GFRA3O60609 400 aa11.63□□□□□ -0.55
NDC80-204ENST00000575515 PLA2G6O60733 806 aa11.63□□□□□ -0.55
NDC80-204ENST00000575515 FOXK2Q01167 660 aa11.63□□□□□ -0.55
NDC80-204ENST00000575515 TFAP4Q01664 338 aa11.63□□□□□ -0.55
NDC80-204ENST00000575515 HERC4Q5GLZ8 1057 aaPredicted RBP11.63□□□□□ -0.55
NDC80-204ENST00000575515 CREB3L3Q68CJ9 461 aa11.63□□□□□ -0.55
NDC80-204ENST00000575515 RCSD1Q6JBY9 416 aa11.63□□□□□ -0.55
NDC80-204ENST00000575515 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.63□□□□□ -0.55
NDC80-204ENST00000575515 RASGRP2Q7LDG7 609 aa11.63□□□□□ -0.55
NDC80-204ENST00000575515 RPAINQ86UA6 219 aa11.63□□□□□ -0.55
NDC80-204ENST00000575515 ZNF589Q86UQ0 364 aaPredicted RBP11.63□□□□□ -0.55
NDC80-204ENST00000575515 DHX38Q92620 1227 aaKnown RBP11.63□□□□□ -0.55
NDC80-204ENST00000575515 MAP4K1Q92918 833 aa11.63□□□□□ -0.55
NDC80-204ENST00000575515 PBXIP1Q96AQ6 731 aa11.63□□□□□ -0.55
NDC80-204ENST00000575515 PRRX2Q99811 253 aa11.63□□□□□ -0.55
NDC80-204ENST00000575515 EPB41L4AQ9HCS5 686 aaPredicted RBP11.63□□□□□ -0.55
NDC80-204ENST00000575515 CHMP5Q9NZZ3 219 aa11.63□□□□□ -0.55
NDC80-204ENST00000575515 B4DLN1 442 aa11.62□□□□□ -0.55
NDC80-204ENST00000575515 SLC3A2P08195 630 aaKnown RBP11.62□□□□□ -0.55
NDC80-204ENST00000575515 MMP3P08254 477 aa11.62□□□□□ -0.55
NDC80-204ENST00000575515 PSMA5P28066 241 aa11.62□□□□□ -0.55
NDC80-204ENST00000575515 MRPL12P52815 198 aaKnown RBP11.62□□□□□ -0.55
NDC80-204ENST00000575515 RBL2Q08999 1139 aa11.62□□□□□ -0.55
NDC80-204ENST00000575515 NBR1Q14596 966 aa11.62□□□□□ -0.55
NDC80-204ENST00000575515 PPP4R3BQ5MIZ7 849 aa11.62□□□□□ -0.55
NDC80-204ENST00000575515 IER5LQ5T953 404 aa11.62□□□□□ -0.55
NDC80-204ENST00000575515 RNF207Q6ZRF8 634 aa11.62□□□□□ -0.55
NDC80-204ENST00000575515 CHST3Q7LGC8 479 aa11.62□□□□□ -0.55
NDC80-204ENST00000575515 SESTD1Q86VW0 696 aa11.62□□□□□ -0.55
NDC80-204ENST00000575515 RNF135Q8IUD6 432 aa11.62□□□□□ -0.55
NDC80-204ENST00000575515 C7orf31Q8N865 590 aa11.62□□□□□ -0.55
NDC80-204ENST00000575515 AFG1LQ8WV93 481 aa11.62□□□□□ -0.55
NDC80-204ENST00000575515 APPBP2Q92624 585 aa11.62□□□□□ -0.55
NDC80-204ENST00000575515 JAKMIP1Q96N16 626 aaKnown RBP11.62□□□□□ -0.55
NDC80-204ENST00000575515 CTAGE1Q96RT6 745 aa11.62□□□□□ -0.55
NDC80-204ENST00000575515 YME1L1Q96TA2 773 aa11.62□□□□□ -0.55
NDC80-204ENST00000575515 SEC62Q99442 399 aaKnown RBP11.62□□□□□ -0.55
NDC80-204ENST00000575515 FAM86C1Q9NVL1 165 aa11.62□□□□□ -0.55
NDC80-204ENST00000575515 PLXNA3P51805 1871 aa11.61□□□□□ -0.55
NDC80-204ENST00000575515 TMEM221A6NGB7 291 aa11.61□□□□□ -0.55
NDC80-204ENST00000575515 H3BNC9 293 aa11.61□□□□□ -0.55
NDC80-204ENST00000575515 RBAK-RBAKDNI3L0D1 243 aa11.61□□□□□ -0.55
NDC80-204ENST00000575515 M0R296 226 aa11.61□□□□□ -0.55
NDC80-204ENST00000575515 SLC27A2O14975 620 aa11.61□□□□□ -0.55
NDC80-204ENST00000575515 GPAA1O43292 621 aa11.61□□□□□ -0.55
NDC80-204ENST00000575515 LGR5O75473 907 aa11.61□□□□□ -0.55
NDC80-204ENST00000575515 GNAT2P19087 354 aa11.61□□□□□ -0.55
NDC80-204ENST00000575515 CASTP20810 708 aaKnown RBP11.61□□□□□ -0.55
NDC80-204ENST00000575515 KRT32Q14532 448 aa11.61□□□□□ -0.55
NDC80-204ENST00000575515 NECTIN1Q15223 517 aa11.61□□□□□ -0.55
NDC80-204ENST00000575515 ZNF618Q5T7W0 954 aa11.61□□□□□ -0.55
NDC80-204ENST00000575515 SP7Q8TDD2 431 aaPredicted RBP11.61□□□□□ -0.55
NDC80-204ENST00000575515 EDAQ92838 391 aa11.61□□□□□ -0.55
NDC80-204ENST00000575515 KCNB2Q92953 911 aa11.61□□□□□ -0.55
NDC80-204ENST00000575515 ALG1Q9BT22 464 aa11.61□□□□□ -0.55
NDC80-204ENST00000575515 RANBP17Q9H2T7 1088 aaKnown RBP11.61□□□□□ -0.55
NDC80-204ENST00000575515 FOXD4L1Q9NU39 408 aa11.61□□□□□ -0.55
NDC80-204ENST00000575515 HDAC6Q9UBN7 1215 aa11.61□□□□□ -0.55
NDC80-204ENST00000575515 GTF2IRD1Q9UHL9 959 aa11.61□□□□□ -0.55
NDC80-204ENST00000575515 CIZ1Q9ULV3 898 aaPredicted RBP11.61□□□□□ -0.55
NDC80-204ENST00000575515 EMSYQ7Z589 1322 aa11.6□□□□□ -0.55
NDC80-204ENST00000575515 CFAP54Q96N23 3096 aa11.6□□□□□ -0.55
NDC80-204ENST00000575515 SPTBN4Q9H254 2564 aa11.6□□□□□ -0.55
NDC80-204ENST00000575515 COL4A6Q14031 1691 aa11.6□□□□□ -0.55
NDC80-204ENST00000575515 TSPY2A6NKD2 308 aa11.6□□□□□ -0.55
NDC80-204ENST00000575515 M0R2C6 588 aa11.6□□□□□ -0.55
NDC80-204ENST00000575515 STXBP3O00186 592 aa11.6□□□□□ -0.55
NDC80-204ENST00000575515 MBTPS2O43462 519 aa11.6□□□□□ -0.55
NDC80-204ENST00000575515 NCK2O43639 380 aa11.6□□□□□ -0.55
NDC80-204ENST00000575515 UPP2O95045 317 aa11.6□□□□□ -0.55
NDC80-204ENST00000575515 CSPG5O95196 566 aa11.6□□□□□ -0.55
NDC80-204ENST00000575515 ARIH2O95376 493 aa11.6□□□□□ -0.55
NDC80-204ENST00000575515 GH1P01241 217 aa11.6□□□□□ -0.55
NDC80-204ENST00000575515 SLC16A2P36021 539 aa11.6□□□□□ -0.55
NDC80-204ENST00000575515 HTRA4P83105 476 aaPredicted RBP11.6□□□□□ -0.55
NDC80-204ENST00000575515 TCF15Q12870 199 aa11.6□□□□□ -0.55
NDC80-204ENST00000575515 PTK7Q13308 1070 aa11.6□□□□□ -0.55
NDC80-204ENST00000575515 SMAD2Q15796 467 aaKnown RBP11.6□□□□□ -0.55
NDC80-204ENST00000575515 PKN1Q16512 942 aa11.6□□□□□ -0.55
NDC80-204ENST00000575515 TRIM67Q6ZTA4 783 aa11.6□□□□□ -0.55
NDC80-204ENST00000575515 FBXO11Q86XK2 927 aa11.6□□□□□ -0.55
NDC80-204ENST00000575515 TMEM192Q8IY95 271 aa11.6□□□□□ -0.55
NDC80-204ENST00000575515 RASEFQ8IZ41 740 aa11.6□□□□□ -0.55
NDC80-204ENST00000575515 DBF4BQ8NFT6 615 aa11.6□□□□□ -0.55
NDC80-204ENST00000575515 OSBP2Q969R2 916 aa11.6□□□□□ -0.55
NDC80-204ENST00000575515 DSCC1Q9BVC3 393 aa11.6□□□□□ -0.55
NDC80-204ENST00000575515 NACAP1Q9BZK3 213 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms