RNA–Protein interactions for RNA: ENST00000575483.5

CDC27-217, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-217ENST00000575483 STXBP2Q15833 593 aa16.22■□□□□ 0.19
CDC27-217ENST00000575483 CCDC85BQ15834 202 aaPredicted RBP16.22■□□□□ 0.19
CDC27-217ENST00000575483 TRAF7Q6Q0C0 670 aa16.22■□□□□ 0.19
CDC27-217ENST00000575483 PHOSPHO2Q8TCD6 241 aa16.22■□□□□ 0.19
CDC27-217ENST00000575483 SLC9A7Q96T83 725 aa16.22■□□□□ 0.19
CDC27-217ENST00000575483 CNNM2Q9H8M5 875 aa16.22■□□□□ 0.19
CDC27-217ENST00000575483 CTNNA3Q9UI47 895 aa16.22■□□□□ 0.19
CDC27-217ENST00000575483 MAD2L2Q9UI95 211 aa16.22■□□□□ 0.19
CDC27-217ENST00000575483 MRPL11Q9Y3B7 192 aaKnown RBP16.22■□□□□ 0.19
CDC27-217ENST00000575483 DOCK5Q9H7D0 1870 aa16.21■□□□□ 0.19
CDC27-217ENST00000575483 PALM3A6NDB9 673 aaPredicted RBP16.21■□□□□ 0.19
CDC27-217ENST00000575483 HAS3O00219 553 aa16.21■□□□□ 0.19
CDC27-217ENST00000575483 EIF3JO75822 258 aaKnown RBP16.21■□□□□ 0.19
CDC27-217ENST00000575483 F2P00734 622 aa16.21■□□□□ 0.19
CDC27-217ENST00000575483 NR3C2P08235 984 aa16.21■□□□□ 0.19
CDC27-217ENST00000575483 PTGISQ16647 500 aa16.21■□□□□ 0.19
CDC27-217ENST00000575483 TCTN1Q2MV58 587 aa16.21■□□□□ 0.19
CDC27-217ENST00000575483 TMEM67Q5HYA8 995 aa16.21■□□□□ 0.19
CDC27-217ENST00000575483 STOX1Q6ZVD7 989 aa16.21■□□□□ 0.19
CDC27-217ENST00000575483 HERC6Q8IVU3 1022 aa16.21■□□□□ 0.19
CDC27-217ENST00000575483 CAGE1Q8TC20 777 aa16.21■□□□□ 0.19
CDC27-217ENST00000575483 AFAP1L1Q8TED9 768 aa16.21■□□□□ 0.19
CDC27-217ENST00000575483 PDCD2LQ9BRP1 358 aa16.21■□□□□ 0.19
CDC27-217ENST00000575483 UBAC1Q9BSL1 405 aa16.21■□□□□ 0.19
CDC27-217ENST00000575483 AMNQ9BXJ7 453 aa16.21■□□□□ 0.19
CDC27-217ENST00000575483 VAT1LQ9HCJ6 419 aa16.21■□□□□ 0.19
CDC27-217ENST00000575483 GTF2IRD1Q9UHL9 959 aa16.21■□□□□ 0.19
CDC27-217ENST00000575483 TAF6LQ9Y6J9 622 aa16.21■□□□□ 0.19
CDC27-217ENST00000575483 MICAL3Q7RTP6 2002 aa16.2■□□□□ 0.18
CDC27-217ENST00000575483 KLRF2D3W0D1 207 aa16.2■□□□□ 0.18
CDC27-217ENST00000575483 RFXAPO00287 272 aa16.2■□□□□ 0.18
CDC27-217ENST00000575483 ACTN1P12814 892 aa16.2■□□□□ 0.18
CDC27-217ENST00000575483 TAP1Q03518 808 aa16.2■□□□□ 0.18
CDC27-217ENST00000575483 HIC1Q14526 733 aa16.2■□□□□ 0.18
CDC27-217ENST00000575483 TRIM71Q2Q1W2 868 aaKnown RBP16.2■□□□□ 0.18
CDC27-217ENST00000575483 IFIT1BQ5T764 474 aaKnown RBP16.2■□□□□ 0.18
CDC27-217ENST00000575483 ARHGEF16Q5VV41 709 aa16.2■□□□□ 0.18
CDC27-217ENST00000575483 SPRED2Q7Z698 418 aa16.2■□□□□ 0.18
CDC27-217ENST00000575483 RETREG2Q8NC44 543 aa16.2■□□□□ 0.18
CDC27-217ENST00000575483 IL31RAQ8NI17 732 aa16.2■□□□□ 0.18
CDC27-217ENST00000575483 PPTC7Q8NI37 304 aa16.2■□□□□ 0.18
CDC27-217ENST00000575483 WNT8BQ93098 351 aa16.2■□□□□ 0.18
CDC27-217ENST00000575483 SENP2Q9HC62 589 aa16.2■□□□□ 0.18
CDC27-217ENST00000575483 MTCH2Q9Y6C9 303 aa16.2■□□□□ 0.18
CDC27-217ENST00000575483 TNFRSF10AO00220 468 aa16.19■□□□□ 0.18
CDC27-217ENST00000575483 ZBTB5O15062 677 aa16.19■□□□□ 0.18
CDC27-217ENST00000575483 CYTH3O43739 400 aa16.19■□□□□ 0.18
CDC27-217ENST00000575483 NBNO60934 754 aa16.19■□□□□ 0.18
CDC27-217ENST00000575483 BAIAP3O94812 1187 aa16.19■□□□□ 0.18
CDC27-217ENST00000575483 CFBP00751 764 aa16.19■□□□□ 0.18
CDC27-217ENST00000575483 CXCL10P02778 98 aa16.19■□□□□ 0.18
CDC27-217ENST00000575483 CYP21A2P08686 494 aa16.19■□□□□ 0.18
CDC27-217ENST00000575483 CASTP20810 708 aaKnown RBP16.19■□□□□ 0.18
CDC27-217ENST00000575483 DGKDQ16760 1214 aa16.19■□□□□ 0.18
CDC27-217ENST00000575483 TTC22Q5TAA0 569 aa16.19■□□□□ 0.18
CDC27-217ENST00000575483 CHST3Q7LGC8 479 aa16.19■□□□□ 0.18
CDC27-217ENST00000575483 HDAC6Q9UBN7 1215 aa16.19■□□□□ 0.18
CDC27-217ENST00000575483 SIP14410 1827 aa16.19■□□□□ 0.18
CDC27-217ENST00000575483 DHX16O60231 1041 aaKnown RBP16.18■□□□□ 0.18
CDC27-217ENST00000575483 ZNF286BP0CG31 522 aa16.18■□□□□ 0.18
CDC27-217ENST00000575483 CKBP12277 381 aa16.18■□□□□ 0.18
CDC27-217ENST00000575483 SELPP16109 830 aa16.18■□□□□ 0.18
CDC27-217ENST00000575483 PSEN2P49810 448 aa16.18■□□□□ 0.18
CDC27-217ENST00000575483 WDR5P61964 334 aaKnown RBP16.18■□□□□ 0.18
CDC27-217ENST00000575483 MRPS5P82675 430 aaKnown RBP16.18■□□□□ 0.18
CDC27-217ENST00000575483 SP2Q02086 613 aa16.18■□□□□ 0.18
CDC27-217ENST00000575483 PTH1RQ03431 593 aa16.18■□□□□ 0.18
CDC27-217ENST00000575483 LAMC2Q13753 1193 aa16.18■□□□□ 0.18
CDC27-217ENST00000575483 MBTPS1Q14703 1052 aa16.18■□□□□ 0.18
CDC27-217ENST00000575483 GRM4Q14833 912 aa16.18■□□□□ 0.18
CDC27-217ENST00000575483 MYSM1Q5VVJ2 828 aa16.18■□□□□ 0.18
CDC27-217ENST00000575483 LRRC8DQ7L1W4 858 aa16.18■□□□□ 0.18
CDC27-217ENST00000575483 VSIG10LQ86VR7 867 aa16.18■□□□□ 0.18
CDC27-217ENST00000575483 ADAMTS19Q8TE59 1207 aa16.18■□□□□ 0.18
CDC27-217ENST00000575483 RIOX1Q9H6W3 641 aa16.18■□□□□ 0.18
CDC27-217ENST00000575483 MAP3K20Q9NYL2 800 aaKnown RBP16.18■□□□□ 0.18
CDC27-217ENST00000575483 NOD1Q9Y239 953 aa16.18■□□□□ 0.18
CDC27-217ENST00000575483 MRVI1Q9Y6F6 885 aa16.18■□□□□ 0.18
CDC27-217ENST00000575483 FRMPD4Q14CM0 1322 aa16.18■□□□□ 0.18
CDC27-217ENST00000575483 LCHNA4D1U4 455 aa16.17■□□□□ 0.18
CDC27-217ENST00000575483 LPXNO60711 386 aa16.17■□□□□ 0.18
CDC27-217ENST00000575483 HOXA13P31271 388 aaPredicted RBP16.17■□□□□ 0.18
CDC27-217ENST00000575483 CHMP4BP1P59074 171 aa16.17■□□□□ 0.18
CDC27-217ENST00000575483 TROAPQ12815 778 aa16.17■□□□□ 0.18
CDC27-217ENST00000575483 MFSD10Q14728 455 aa16.17■□□□□ 0.18
CDC27-217ENST00000575483 PGM5Q15124 567 aa16.17■□□□□ 0.18
CDC27-217ENST00000575483 HSDL1Q3SXM5 330 aa16.17■□□□□ 0.18
CDC27-217ENST00000575483 KRT40Q6A162 431 aa16.17■□□□□ 0.18
CDC27-217ENST00000575483 TMCO2Q7Z6W1 182 aaPredicted RBP16.17■□□□□ 0.18
CDC27-217ENST00000575483 SAMD3Q8N6K7 520 aa16.17■□□□□ 0.18
CDC27-217ENST00000575483 CCDC155Q8N6L0 562 aa16.17■□□□□ 0.18
CDC27-217ENST00000575483 FTOQ9C0B1 505 aaKnown RBP eCLIP16.17■□□□□ 0.18
CDC27-217ENST00000575483 CERS4Q9HA82 394 aa16.17■□□□□ 0.18
CDC27-217ENST00000575483 PCDHA1Q9Y5I3 950 aa16.17■□□□□ 0.18
CDC27-217ENST00000575483 BMP1P13497 986 aa16.16■□□□□ 0.18
CDC27-217ENST00000575483 UBA1P22314 1058 aaKnown RBP16.16■□□□□ 0.18
CDC27-217ENST00000575483 HOXC8P31273 242 aa16.16■□□□□ 0.18
CDC27-217ENST00000575483 DEFB103AP81534 67 aa16.16■□□□□ 0.18
CDC27-217ENST00000575483 ZNF200P98182 395 aaPredicted RBP16.16■□□□□ 0.18
CDC27-217ENST00000575483 TFF2Q03403 129 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms