RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 GOLGA6L10A0A0M3HER8 536 aa10.54□□□□□ -0.72
CCDC40-212ENST00000574799 PHF20L1A8MW92 1017 aa10.54□□□□□ -0.72
CCDC40-212ENST00000574799 H7C1D1 291 aa10.54□□□□□ -0.72
CCDC40-212ENST00000574799 DEXIO95424 95 aa10.54□□□□□ -0.72
CCDC40-212ENST00000574799 LIFRP42702 1097 aa10.54□□□□□ -0.72
CCDC40-212ENST00000574799 GNPTABQ3T906 1256 aa10.54□□□□□ -0.72
CCDC40-212ENST00000574799 MFSD6Q6ZSS7 791 aa10.54□□□□□ -0.72
CCDC40-212ENST00000574799 FAM43BQ6ZT52 329 aaPredicted RBP10.54□□□□□ -0.72
CCDC40-212ENST00000574799 CCDC197Q8NCU1 140 aa10.54□□□□□ -0.72
CCDC40-212ENST00000574799 OR2W6PQ8NHA6 318 aa10.54□□□□□ -0.72
CCDC40-212ENST00000574799 LRRC45Q96CN5 670 aa10.54□□□□□ -0.72
CCDC40-212ENST00000574799 STAMBPL1Q96FJ0 436 aa10.54□□□□□ -0.72
CCDC40-212ENST00000574799 MS4A14Q96JA4 679 aa10.54□□□□□ -0.72
CCDC40-212ENST00000574799 TRIM31Q9BZY9 425 aa10.54□□□□□ -0.72
CCDC40-212ENST00000574799 ATP6V0A4Q9HBG4 840 aa10.54□□□□□ -0.72
CCDC40-212ENST00000574799 RBM12Q9NTZ6 932 aaKnown RBP10.54□□□□□ -0.72
CCDC40-212ENST00000574799 RWDD2AQ9UIY3 292 aa10.54□□□□□ -0.72
CCDC40-212ENST00000574799 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.54□□□□□ -0.72
CCDC40-212ENST00000574799 SLC4A4Q9Y6R1 1079 aa10.54□□□□□ -0.72
CCDC40-212ENST00000574799 ZSCAN5CA6NGD5 496 aaPredicted RBP10.54□□□□□ -0.72
CCDC40-212ENST00000574799 CTNND1O60716 968 aaKnown RBP10.54□□□□□ -0.72
CCDC40-212ENST00000574799 SARSP49591 514 aaKnown RBP10.54□□□□□ -0.72
CCDC40-212ENST00000574799 MAP3K12Q12852 859 aa10.54□□□□□ -0.72
CCDC40-212ENST00000574799 CDKAL1Q5VV42 579 aa10.54□□□□□ -0.72
CCDC40-212ENST00000574799 OXER1Q8TDS5 423 aa10.54□□□□□ -0.72
CCDC40-212ENST00000574799 SEC16BQ96JE7 1060 aa10.54□□□□□ -0.72
CCDC40-212ENST00000574799 NUP58Q9BVL2 599 aa10.54□□□□□ -0.72
CCDC40-212ENST00000574799 EXOC1Q9NV70 894 aa10.54□□□□□ -0.72
CCDC40-212ENST00000574799 SWAP70Q9UH65 585 aa10.54□□□□□ -0.72
CCDC40-212ENST00000574799 MTMR7Q9Y216 660 aa10.54□□□□□ -0.72
CCDC40-212ENST00000574799 REXO2Q9Y3B8 237 aaKnown RBP10.54□□□□□ -0.72
CCDC40-212ENST00000574799 MINDY4BA8MYZ0 360 aa10.53□□□□□ -0.72
CCDC40-212ENST00000574799 PCK1P35558 622 aa10.53□□□□□ -0.72
CCDC40-212ENST00000574799 KRT2P35908 639 aa10.53□□□□□ -0.72
CCDC40-212ENST00000574799 UBA7P41226 1012 aa10.53□□□□□ -0.72
CCDC40-212ENST00000574799 SCTRP47872 440 aa10.53□□□□□ -0.72
CCDC40-212ENST00000574799 TOB1P50616 345 aaPredicted RBP10.53□□□□□ -0.72
CCDC40-212ENST00000574799 RASSF7Q02833 373 aa10.53□□□□□ -0.72
CCDC40-212ENST00000574799 KCNB1Q14721 858 aa10.53□□□□□ -0.72
CCDC40-212ENST00000574799 NPY5RQ15761 445 aa10.53□□□□□ -0.72
CCDC40-212ENST00000574799 MMGT1Q8N4V1 131 aa10.53□□□□□ -0.72
CCDC40-212ENST00000574799 SETDB2Q96T68 719 aa10.53□□□□□ -0.72
CCDC40-212ENST00000574799 LIMA1Q9UHB6 759 aaKnown RBP10.53□□□□□ -0.72
CCDC40-212ENST00000574799 KLRG2A4D1S0 409 aaPredicted RBP10.53□□□□□ -0.72
CCDC40-212ENST00000574799 DIAPH2O60879 1101 aa10.53□□□□□ -0.72
CCDC40-212ENST00000574799 SMIM24O75264 130 aa10.53□□□□□ -0.72
CCDC40-212ENST00000574799 AP1G2O75843 785 aa10.53□□□□□ -0.72
CCDC40-212ENST00000574799 FAXDC2Q96IV6 333 aa10.53□□□□□ -0.72
CCDC40-212ENST00000574799 TUBGCP2Q9BSJ2 902 aa10.53□□□□□ -0.72
CCDC40-212ENST00000574799 RTCBQ9Y3I0 505 aaKnown RBP10.53□□□□□ -0.72
CCDC40-212ENST00000574799 L3MBTL1Q9Y468 752 aa10.53□□□□□ -0.72
CCDC40-212ENST00000574799 PCNTO95613 3336 aa10.53□□□□□ -0.72
CCDC40-212ENST00000574799 PPP1R3GB7ZBB8 358 aa10.53□□□□□ -0.72
CCDC40-212ENST00000574799 WNT7AO00755 349 aa10.53□□□□□ -0.72
CCDC40-212ENST00000574799 PRDM1O75626 825 aa10.53□□□□□ -0.72
CCDC40-212ENST00000574799 BMP15O95972 392 aa10.53□□□□□ -0.72
CCDC40-212ENST00000574799 NLRP5P59047 1200 aa10.53□□□□□ -0.72
CCDC40-212ENST00000574799 CUL4BQ13620 913 aa10.53□□□□□ -0.72
CCDC40-212ENST00000574799 RRAGAQ7L523 313 aa10.53□□□□□ -0.72
CCDC40-212ENST00000574799 NBPF5PQ86XG9 351 aaPredicted RBP10.53□□□□□ -0.72
CCDC40-212ENST00000574799 NOP53Q9NZM5 478 aaKnown RBP10.53□□□□□ -0.72
CCDC40-212ENST00000574799 FTCDO95954 541 aa10.52□□□□□ -0.72
CCDC40-212ENST00000574799 RPN1P04843 607 aaKnown RBP10.52□□□□□ -0.72
CCDC40-212ENST00000574799 FAM153BP0C7A2 387 aa10.52□□□□□ -0.72
CCDC40-212ENST00000574799 LACTBP83111 547 aaPredicted RBP10.52□□□□□ -0.72
CCDC40-212ENST00000574799 PKN1Q16512 942 aa10.52□□□□□ -0.72
CCDC40-212ENST00000574799 FAM153CQ494X1 144 aa10.52□□□□□ -0.72
CCDC40-212ENST00000574799 ACCSLQ4AC99 568 aa10.52□□□□□ -0.72
CCDC40-212ENST00000574799 YTHDF3Q7Z739 585 aaKnown RBP10.52□□□□□ -0.72
CCDC40-212ENST00000574799 FAM114A1Q8IWE2 563 aa10.52□□□□□ -0.72
CCDC40-212ENST00000574799 SPDYE1Q8NFV5 336 aaPredicted RBP10.52□□□□□ -0.72
CCDC40-212ENST00000574799 LMBR1Q8WVP7 490 aa10.52□□□□□ -0.72
CCDC40-212ENST00000574799 CUL5Q93034 780 aa10.52□□□□□ -0.72
CCDC40-212ENST00000574799 FOXP1Q9H334 677 aaPredicted RBP10.52□□□□□ -0.72
CCDC40-212ENST00000574799 FAM153AQ9UHL3 310 aa10.52□□□□□ -0.72
CCDC40-212ENST00000574799 JAG2Q9Y219 1238 aa10.52□□□□□ -0.72
CCDC40-212ENST00000574799 CAPN6Q9Y6Q1 641 aa10.52□□□□□ -0.72
CCDC40-212ENST00000574799 MYH8P13535 1937 aa10.52□□□□□ -0.72
CCDC40-212ENST00000574799 LGALS16A8MUM7 142 aa10.52□□□□□ -0.73
CCDC40-212ENST00000574799 VEGFAP15692 232 aaPredicted RBP10.52□□□□□ -0.73
CCDC40-212ENST00000574799 MRPL12P52815 198 aaKnown RBP10.52□□□□□ -0.73
CCDC40-212ENST00000574799 EHHADHQ08426 723 aa10.52□□□□□ -0.73
CCDC40-212ENST00000574799 SLC35G1Q2M3R5 365 aa10.52□□□□□ -0.73
CCDC40-212ENST00000574799 TTC38Q5R3I4 469 aa10.52□□□□□ -0.73
CCDC40-212ENST00000574799 FERMT2Q96AC1 680 aa10.52□□□□□ -0.73
CCDC40-212ENST00000574799 NACAP1Q9BZK3 213 aa10.52□□□□□ -0.73
CCDC40-212ENST00000574799 PCDHA13Q9Y5I0 950 aa10.52□□□□□ -0.73
CCDC40-212ENST00000574799 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.52□□□□□ -0.73
CCDC40-212ENST00000574799 FAM205CA6NFA0 338 aa10.52□□□□□ -0.73
CCDC40-212ENST00000574799 POLRMTO00411 1230 aaKnown RBP10.52□□□□□ -0.73
CCDC40-212ENST00000574799 RASSF9O75901 435 aa10.52□□□□□ -0.73
CCDC40-212ENST00000574799 MYBL1P10243 752 aa10.52□□□□□ -0.73
CCDC40-212ENST00000574799 CYP2D6P10635 497 aa10.52□□□□□ -0.73
CCDC40-212ENST00000574799 CYP7A1P22680 504 aa10.52□□□□□ -0.73
CCDC40-212ENST00000574799 EPS15P42566 896 aa10.52□□□□□ -0.73
CCDC40-212ENST00000574799 PRCPP42785 496 aa10.52□□□□□ -0.73
CCDC40-212ENST00000574799 IFNAR2P48551 515 aa10.52□□□□□ -0.73
CCDC40-212ENST00000574799 ZBED6P86452 979 aa10.52□□□□□ -0.73
CCDC40-212ENST00000574799 PTGDRQ13258 359 aa10.52□□□□□ -0.73
CCDC40-212ENST00000574799 ANKRD20A8PQ5CZ79 823 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms