RNA–Protein interactions for RNA: ENST00000574728.1

PRPF8-211, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-211ENST00000574728 PIP4K2AP48426 406 aaPredicted RBP6.2□□□□□ -1.42
PRPF8-211ENST00000574728 SLC7A5Q01650 507 aa6.2□□□□□ -1.42
PRPF8-211ENST00000574728 RAB33AQ14088 237 aa6.2□□□□□ -1.42
PRPF8-211ENST00000574728 KRT24Q2M2I5 525 aa6.2□□□□□ -1.42
PRPF8-211ENST00000574728 GNPTABQ3T906 1256 aa6.2□□□□□ -1.42
PRPF8-211ENST00000574728 TDRD10Q5VZ19 366 aaKnown RBP6.2□□□□□ -1.42
PRPF8-211ENST00000574728 VHLLQ6RSH7 139 aa6.2□□□□□ -1.42
PRPF8-211ENST00000574728 TTC5Q8N0Z6 440 aa6.2□□□□□ -1.42
PRPF8-211ENST00000574728 NLGN1Q8N2Q7 840 aa6.2□□□□□ -1.42
PRPF8-211ENST00000574728 FAM181AQ8N9Y4 354 aa6.2□□□□□ -1.42
PRPF8-211ENST00000574728 PIWIL2Q8TC59 973 aaKnown RBP6.2□□□□□ -1.42
PRPF8-211ENST00000574728 RTF1Q92541 710 aaKnown RBP6.2□□□□□ -1.42
PRPF8-211ENST00000574728 VWCEQ96DN2 955 aa6.2□□□□□ -1.42
PRPF8-211ENST00000574728 ZNF512BQ96KM6 892 aaPredicted RBP6.2□□□□□ -1.42
PRPF8-211ENST00000574728 TEX13AQ9BXU3 409 aaPredicted RBP6.2□□□□□ -1.42
PRPF8-211ENST00000574728 BABAM1Q9NWV8 329 aa6.2□□□□□ -1.42
PRPF8-211ENST00000574728 CD2APQ9Y5K6 639 aa6.2□□□□□ -1.42
PRPF8-211ENST00000574728 PXDNLA1KZ92 1463 aa6.2□□□□□ -1.42
PRPF8-211ENST00000574728 MAPK8IP3Q9UPT6 1336 aa6.2□□□□□ -1.42
PRPF8-211ENST00000574728 PRR33A8MZF0 331 aa6.19□□□□□ -1.42
PRPF8-211ENST00000574728 DDAH1O94760 285 aa6.19□□□□□ -1.42
PRPF8-211ENST00000574728 STARD3NLO95772 234 aa6.19□□□□□ -1.42
PRPF8-211ENST00000574728 TGFB1P01137 390 aa6.19□□□□□ -1.42
PRPF8-211ENST00000574728 CEACAM5P06731 702 aa6.19□□□□□ -1.42
PRPF8-211ENST00000574728 ITIH2P19823 946 aa6.19□□□□□ -1.42
PRPF8-211ENST00000574728 CANXP27824 592 aaKnown RBP6.19□□□□□ -1.42
PRPF8-211ENST00000574728 POLD1P28340 1107 aa6.19□□□□□ -1.42
PRPF8-211ENST00000574728 RFC4P35249 363 aa6.19□□□□□ -1.42
PRPF8-211ENST00000574728 OXCT1P55809 520 aa6.19□□□□□ -1.42
PRPF8-211ENST00000574728 NFIXQ14938 502 aa6.19□□□□□ -1.42
PRPF8-211ENST00000574728 NCAPHQ15003 741 aa6.19□□□□□ -1.42
PRPF8-211ENST00000574728 WDR43Q15061 677 aaKnown RBP eCLIP6.19□□□□□ -1.42
PRPF8-211ENST00000574728 PROSER3Q2NL68 480 aa6.19□□□□□ -1.42
PRPF8-211ENST00000574728 CCDC144CPQ8IYA2 1237 aa6.19□□□□□ -1.42
PRPF8-211ENST00000574728 PNNQ9H307 717 aaKnown RBP6.19□□□□□ -1.42
PRPF8-211ENST00000574728 PCDHB10Q9UN67 800 aa6.19□□□□□ -1.42
PRPF8-211ENST00000574728 CAPN6Q9Y6Q1 641 aa6.19□□□□□ -1.42
PRPF8-211ENST00000574728 CARMIL3Q8ND23 1372 aa6.18□□□□□ -1.42
PRPF8-211ENST00000574728 C9IYK1 514 aa6.18□□□□□ -1.42
PRPF8-211ENST00000574728 TP53P04637 393 aaPredicted RBP6.18□□□□□ -1.42
PRPF8-211ENST00000574728 DDR2Q16832 855 aa6.18□□□□□ -1.42
PRPF8-211ENST00000574728 KIAA1211LQ6NV74 962 aa6.18□□□□□ -1.42
PRPF8-211ENST00000574728 C6orf15Q6UXA7 325 aaPredicted RBP6.18□□□□□ -1.42
PRPF8-211ENST00000574728 PPFIBP1Q86W92 1011 aa6.18□□□□□ -1.42
PRPF8-211ENST00000574728 FAM178BQ8IXR5 827 aa6.18□□□□□ -1.42
PRPF8-211ENST00000574728 DTWD2Q8NBA8 298 aa6.18□□□□□ -1.42
PRPF8-211ENST00000574728 NETO1Q8TDF5 533 aa6.18□□□□□ -1.42
PRPF8-211ENST00000574728 Q96M66 194 aa6.18□□□□□ -1.42
PRPF8-211ENST00000574728 FAM86C1Q9NVL1 165 aa6.18□□□□□ -1.42
PRPF8-211ENST00000574728 SIRPGQ9P1W8 387 aa6.18□□□□□ -1.42
PRPF8-211ENST00000574728 RNF112Q9ULX5 631 aa6.18□□□□□ -1.42
PRPF8-211ENST00000574728 NRXN2Q9P2S2 1712 aa6.18□□□□□ -1.42
PRPF8-211ENST00000574728 CEP350Q5VT06 3117 aa6.18□□□□□ -1.42
PRPF8-211ENST00000574728 KIF13BQ9NQT8 1826 aa6.18□□□□□ -1.42
PRPF8-211ENST00000574728 SCN7AQ01118 1682 aa6.17□□□□□ -1.42
PRPF8-211ENST00000574728 TMEM265A0A087WTH1 108 aa6.17□□□□□ -1.42
PRPF8-211ENST00000574728 COBLO75128 1261 aa6.17□□□□□ -1.42
PRPF8-211ENST00000574728 LRRN2O75325 713 aa6.17□□□□□ -1.42
PRPF8-211ENST00000574728 HOXA10P31260 410 aaPredicted RBP6.17□□□□□ -1.42
PRPF8-211ENST00000574728 CLCN7P51798 805 aa6.17□□□□□ -1.42
PRPF8-211ENST00000574728 TNK2Q07912 1038 aa6.17□□□□□ -1.42
PRPF8-211ENST00000574728 LMOD3Q0VAK6 560 aa6.17□□□□□ -1.42
PRPF8-211ENST00000574728 AUHQ13825 339 aaKnown RBP6.17□□□□□ -1.42
PRPF8-211ENST00000574728 HLFQ16534 295 aa6.17□□□□□ -1.42
PRPF8-211ENST00000574728 IFI16Q16666 785 aaKnown RBP6.17□□□□□ -1.42
PRPF8-211ENST00000574728 NBPF9Q3BBW0 867 aa6.17□□□□□ -1.42
PRPF8-211ENST00000574728 AXDND1Q5T1B0 1012 aaPredicted RBP6.17□□□□□ -1.42
PRPF8-211ENST00000574728 TBC1D9BQ66K14 1250 aa6.17□□□□□ -1.42
PRPF8-211ENST00000574728 TTLL7Q6ZT98 887 aa6.17□□□□□ -1.42
PRPF8-211ENST00000574728 C7orf61Q8IZ16 206 aa6.17□□□□□ -1.42
PRPF8-211ENST00000574728 PLD6Q8N2A8 252 aaKnown RBP6.17□□□□□ -1.42
PRPF8-211ENST00000574728 CELF2-AS1Q8N7Q2 184 aa6.17□□□□□ -1.42
PRPF8-211ENST00000574728 KLHL6Q8WZ60 621 aa6.17□□□□□ -1.42
PRPF8-211ENST00000574728 ASCC2Q9H1I8 757 aaPredicted RBP6.17□□□□□ -1.42
PRPF8-211ENST00000574728 ST7Q9NRC1 585 aa6.17□□□□□ -1.42
PRPF8-211ENST00000574728 ZC3H7BQ9UGR2 993 aaKnown RBP6.17□□□□□ -1.42
PRPF8-211ENST00000574728 TSPYL4Q9UJ04 414 aa6.17□□□□□ -1.42
PRPF8-211ENST00000574728 FBXL21Q9UKT6 434 aa6.17□□□□□ -1.42
PRPF8-211ENST00000574728 PCDHB12Q9Y5F1 795 aa6.17□□□□□ -1.42
PRPF8-211ENST00000574728 U3KQE9 123 aa6.17□□□□□ -1.42
PRPF8-211ENST00000574728 ZNF521Q96K83 1311 aa6.17□□□□□ -1.42
PRPF8-211ENST00000574728 A0A087WZG4 1122 aa6.16□□□□□ -1.42
PRPF8-211ENST00000574728 ANP32CO43423 234 aa6.16□□□□□ -1.42
PRPF8-211ENST00000574728 NAT2P11245 290 aa6.16□□□□□ -1.42
PRPF8-211ENST00000574728 DPEP1P16444 411 aa6.16□□□□□ -1.42
PRPF8-211ENST00000574728 TCEAL1Q15170 157 aa6.16□□□□□ -1.42
PRPF8-211ENST00000574728 NKPD1Q17RQ9 610 aa6.16□□□□□ -1.42
PRPF8-211ENST00000574728 ANKRD39Q53RE8 183 aa6.16□□□□□ -1.42
PRPF8-211ENST00000574728 CDKAL1Q5VV42 579 aa6.16□□□□□ -1.42
PRPF8-211ENST00000574728 HEATR6Q6AI08 1181 aaKnown RBP6.16□□□□□ -1.42
PRPF8-211ENST00000574728 SPACA3Q8IXA5 215 aa6.16□□□□□ -1.42
PRPF8-211ENST00000574728 C8orf58Q8NAV2 365 aa6.16□□□□□ -1.42
PRPF8-211ENST00000574728 HAUS7Q99871 368 aa6.16□□□□□ -1.42
PRPF8-211ENST00000574728 TRIT1Q9H3H1 467 aaKnown RBP6.16□□□□□ -1.42
PRPF8-211ENST00000574728 IFT57Q9NWB7 429 aa6.16□□□□□ -1.42
PRPF8-211ENST00000574728 PLAGL2Q9UPG8 496 aa6.16□□□□□ -1.42
PRPF8-211ENST00000574728 SNX11Q9Y5W9 270 aa6.16□□□□□ -1.42
PRPF8-211ENST00000574728 LAMB4A4D0S4 1761 aa6.16□□□□□ -1.42
PRPF8-211ENST00000574728 A0A0G2JLW4 131 aa6.15□□□□□ -1.42
PRPF8-211ENST00000574728 KLRG2A4D1S0 409 aaPredicted RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms