RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 PLXNA1Q9UIW2 1896 aa27.15■■□□□ 1.94
ATPAF1-213ENST00000574428 PP2D1A8MPX8 630 aa27.14■■□□□ 1.94
ATPAF1-213ENST00000574428 RGS20O76081 388 aa27.14■■□□□ 1.94
ATPAF1-213ENST00000574428 HSPA6P17066 643 aa27.14■■□□□ 1.94
ATPAF1-213ENST00000574428 FXR2P51116 673 aaKnown RBP eCLIP27.14■■□□□ 1.94
ATPAF1-213ENST00000574428 DPP9Q86TI2 863 aa27.14■■□□□ 1.94
ATPAF1-213ENST00000574428 INPP4AQ96PE3 977 aaPredicted RBP27.14■■□□□ 1.94
ATPAF1-213ENST00000574428 ZNF577Q9BSK1 485 aa27.14■■□□□ 1.94
ATPAF1-213ENST00000574428 PCDHA12Q9UN75 941 aa27.14■■□□□ 1.94
ATPAF1-213ENST00000574428 CTGFP29279 349 aa27.14■■□□□ 1.93
ATPAF1-213ENST00000574428 CDC25AP30304 524 aa27.14■■□□□ 1.93
ATPAF1-213ENST00000574428 SLC5A5Q92911 643 aa27.14■■□□□ 1.93
ATPAF1-213ENST00000574428 POTEMA6NI47 508 aa27.13■■□□□ 1.93
ATPAF1-213ENST00000574428 NR1I2O75469 434 aa27.13■■□□□ 1.93
ATPAF1-213ENST00000574428 EIF3JO75822 258 aaKnown RBP27.13■■□□□ 1.93
ATPAF1-213ENST00000574428 STAM2O75886 525 aa27.13■■□□□ 1.93
ATPAF1-213ENST00000574428 C1QTNF8P60827 252 aa27.13■■□□□ 1.93
ATPAF1-213ENST00000574428 MORN1Q5T089 497 aa27.13■■□□□ 1.93
ATPAF1-213ENST00000574428 IGSF22Q8N9C0 903 aa27.13■■□□□ 1.93
ATPAF1-213ENST00000574428 MPHOSPH6Q99547 160 aaKnown RBP27.13■■□□□ 1.93
ATPAF1-213ENST00000574428 AGO4Q9HCK5 861 aaKnown RBP27.13■■□□□ 1.93
ATPAF1-213ENST00000574428 ZSWIM8A7E2V4 1837 aa27.12■■□□□ 1.93
ATPAF1-213ENST00000574428 B4DLN1 442 aa27.12■■□□□ 1.93
ATPAF1-213ENST00000574428 IPO5O00410 1097 aaKnown RBP27.12■■□□□ 1.93
ATPAF1-213ENST00000574428 TNPO2O14787 897 aaKnown RBP27.12■■□□□ 1.93
ATPAF1-213ENST00000574428 NLRX1Q86UT6 975 aa27.12■■□□□ 1.93
ATPAF1-213ENST00000574428 GPRASP2Q96D09 838 aa27.12■■□□□ 1.93
ATPAF1-213ENST00000574428 CFHR5Q9BXR6 569 aa27.12■■□□□ 1.93
ATPAF1-213ENST00000574428 ARHGAP39Q9C0H5 1083 aa27.12■■□□□ 1.93
ATPAF1-213ENST00000574428 FAM13BQ9NYF5 915 aa27.12■■□□□ 1.93
ATPAF1-213ENST00000574428 HPSEQ9Y251 543 aa27.12■■□□□ 1.93
ATPAF1-213ENST00000574428 FAM160A1Q05DH4 1040 aa27.12■■□□□ 1.93
ATPAF1-213ENST00000574428 LRCH2Q5VUJ6 765 aa27.12■■□□□ 1.93
ATPAF1-213ENST00000574428 DACT1Q9NYF0 836 aa27.12■■□□□ 1.93
ATPAF1-213ENST00000574428 LACTBP83111 547 aaPredicted RBP27.11■■□□□ 1.93
ATPAF1-213ENST00000574428 SEMA3FQ13275 785 aa27.11■■□□□ 1.93
ATPAF1-213ENST00000574428 SNW1Q13573 536 aaKnown RBP27.11■■□□□ 1.93
ATPAF1-213ENST00000574428 EEPD1Q7L9B9 569 aa27.11■■□□□ 1.93
ATPAF1-213ENST00000574428 ENGASEQ8NFI3 743 aa27.11■■□□□ 1.93
ATPAF1-213ENST00000574428 AK8Q96MA6 479 aa27.11■■□□□ 1.93
ATPAF1-213ENST00000574428 LRWD1Q9UFC0 647 aa27.11■■□□□ 1.93
ATPAF1-213ENST00000574428 VAV3Q9UKW4 847 aa27.11■■□□□ 1.93
ATPAF1-213ENST00000574428 KCNH3Q9ULD8 1083 aa27.11■■□□□ 1.93
ATPAF1-213ENST00000574428 FAM237AA0A1B0GTK4 181 aa27.1■■□□□ 1.93
ATPAF1-213ENST00000574428 MAP2K5Q13163 448 aa27.1■■□□□ 1.93
ATPAF1-213ENST00000574428 ITGB3BPQ13352 177 aaPredicted RBP27.1■■□□□ 1.93
ATPAF1-213ENST00000574428 GNPTABQ3T906 1256 aa27.1■■□□□ 1.93
ATPAF1-213ENST00000574428 CAVIN1Q6NZI2 390 aaKnown RBP27.1■■□□□ 1.93
ATPAF1-213ENST00000574428 SEPT14Q6ZU15 432 aa27.1■■□□□ 1.93
ATPAF1-213ENST00000574428 FMR1NBQ8N0W7 255 aaPredicted RBP27.1■■□□□ 1.93
ATPAF1-213ENST00000574428 NPLOC4Q8TAT6 608 aa27.1■■□□□ 1.93
ATPAF1-213ENST00000574428 PANK2Q9BZ23 570 aa27.1■■□□□ 1.93
ATPAF1-213ENST00000574428 RAB34Q9BZG1 259 aa27.1■■□□□ 1.93
ATPAF1-213ENST00000574428 MGAMO43451 1857 aa27.1■■□□□ 1.93
ATPAF1-213ENST00000574428 ASB14A6NK59 587 aa27.09■■□□□ 1.93
ATPAF1-213ENST00000574428 GAS7O60861 476 aa27.09■■□□□ 1.93
ATPAF1-213ENST00000574428 PSMD10O75832 226 aa27.09■■□□□ 1.93
ATPAF1-213ENST00000574428 PSMC4P43686 418 aa27.09■■□□□ 1.93
ATPAF1-213ENST00000574428 SPIRE1Q08AE8 756 aa27.09■■□□□ 1.93
ATPAF1-213ENST00000574428 PDIA5Q14554 519 aa27.09■■□□□ 1.93
ATPAF1-213ENST00000574428 ARMCX2Q7L311 632 aa27.09■■□□□ 1.93
ATPAF1-213ENST00000574428 MORC4Q8TE76 937 aa27.09■■□□□ 1.93
ATPAF1-213ENST00000574428 MAML3Q96JK9 1138 aa27.09■■□□□ 1.93
ATPAF1-213ENST00000574428 TRIM47Q96LD4 638 aa27.09■■□□□ 1.93
ATPAF1-213ENST00000574428 LOC102724159A0A0B4J2E5 919 aa27.09■■□□□ 1.93
ATPAF1-213ENST00000574428 ATP9AO75110 1047 aa27.09■■□□□ 1.93
ATPAF1-213ENST00000574428 FCGRTP55899 365 aa27.09■■□□□ 1.93
ATPAF1-213ENST00000574428 PWP2Q15269 919 aaKnown RBP27.09■■□□□ 1.93
ATPAF1-213ENST00000574428 ZNF467Q7Z7K2 595 aaPredicted RBP27.09■■□□□ 1.93
ATPAF1-213ENST00000574428 PDILTQ8N807 584 aa27.09■■□□□ 1.93
ATPAF1-213ENST00000574428 DIS3Q9Y2L1 958 aaKnown RBP27.09■■□□□ 1.93
ATPAF1-213ENST00000574428 MCM3APO60318 1980 aa27.08■■□□□ 1.93
ATPAF1-213ENST00000574428 A0A087X0B3 334 aa27.08■■□□□ 1.93
ATPAF1-213ENST00000574428 DDX39AO00148 427 aaKnown RBP27.08■■□□□ 1.93
ATPAF1-213ENST00000574428 SYKP43405 635 aa27.08■■□□□ 1.93
ATPAF1-213ENST00000574428 SP3Q02447 781 aa27.08■■□□□ 1.93
ATPAF1-213ENST00000574428 NCAPH2Q6IBW4 605 aa27.08■■□□□ 1.93
ATPAF1-213ENST00000574428 USP6NLQ92738 828 aa27.08■■□□□ 1.93
ATPAF1-213ENST00000574428 NUDT12Q9BQG2 462 aa27.08■■□□□ 1.93
ATPAF1-213ENST00000574428 SLC5A4Q9NY91 659 aa27.08■■□□□ 1.93
ATPAF1-213ENST00000574428 DOCK3Q8IZD9 2030 aa27.08■■□□□ 1.93
ATPAF1-213ENST00000574428 KIAA1217Q5T5P2 1943 aa27.08■■□□□ 1.92
ATPAF1-213ENST00000574428 SPATA31C2B4DYI2 1134 aa27.07■■□□□ 1.92
ATPAF1-213ENST00000574428 UBA7P41226 1012 aa27.07■■□□□ 1.92
ATPAF1-213ENST00000574428 FBXO16Q8IX29 292 aaPredicted RBP27.07■■□□□ 1.92
ATPAF1-213ENST00000574428 SOCS4Q8WXH5 440 aa27.07■■□□□ 1.92
ATPAF1-213ENST00000574428 CDHR1Q96JP9 859 aa27.07■■□□□ 1.92
ATPAF1-213ENST00000574428 RIT2Q99578 217 aa27.07■■□□□ 1.92
ATPAF1-213ENST00000574428 TEKT3Q9BXF9 490 aa27.07■■□□□ 1.92
ATPAF1-213ENST00000574428 TMEM63CQ9P1W3 806 aa27.07■■□□□ 1.92
ATPAF1-213ENST00000574428 GJD2Q9UKL4 321 aa27.07■■□□□ 1.92
ATPAF1-213ENST00000574428 DHX15O43143 795 aaKnown RBP27.07■■□□□ 1.92
ATPAF1-213ENST00000574428 CHMP2AO43633 222 aa27.07■■□□□ 1.92
ATPAF1-213ENST00000574428 TXLNAP40222 546 aa27.07■■□□□ 1.92
ATPAF1-213ENST00000574428 OTOP1Q7RTM1 612 aa27.07■■□□□ 1.92
ATPAF1-213ENST00000574428 CABP7Q86V35 215 aa27.07■■□□□ 1.92
ATPAF1-213ENST00000574428 MMTAG2Q9BU76 263 aaKnown RBP27.07■■□□□ 1.92
ATPAF1-213ENST00000574428 PCNTO95613 3336 aa27.06■■□□□ 1.92
ATPAF1-213ENST00000574428 POLR2DO15514 142 aaKnown RBP27.06■■□□□ 1.92
ATPAF1-213ENST00000574428 MAFGO15525 162 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms