RNA–Protein interactions for RNA: ENST00000574205.5

CTDNEP1-209, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 1,506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-209ENST00000574205 USP11P51784 963 aa37.71■■■■□ 3.63
CTDNEP1-209ENST00000574205 NKX3-2P78367 333 aa37.71■■■■□ 3.63
CTDNEP1-209ENST00000574205 MTMR1Q13613 665 aa37.71■■■■□ 3.63
CTDNEP1-209ENST00000574205 LRRC41Q15345 812 aa37.71■■■■□ 3.63
CTDNEP1-209ENST00000574205 TNFRSF25Q93038 417 aa37.71■■■■□ 3.63
CTDNEP1-209ENST00000574205 DNM1LO00429 736 aa37.71■■■■□ 3.63
CTDNEP1-209ENST00000574205 C6orf222P0C671 652 aaPredicted RBP37.71■■■■□ 3.63
CTDNEP1-209ENST00000574205 PTGS1P23219 599 aa37.71■■■■□ 3.63
CTDNEP1-209ENST00000574205 SEMA3FQ13275 785 aa37.71■■■■□ 3.63
CTDNEP1-209ENST00000574205 CIITAP33076 1130 aa37.7■■■■□ 3.63
CTDNEP1-209ENST00000574205 PIK3AP1Q6ZUJ8 805 aa37.7■■■■□ 3.63
CTDNEP1-209ENST00000574205 NIPA1Q7RTP0 329 aa37.7■■■■□ 3.63
CTDNEP1-209ENST00000574205 CYP2W1Q8TAV3 490 aa37.7■■■■□ 3.63
CTDNEP1-209ENST00000574205 COPS5Q92905 334 aa37.7■■■■□ 3.63
CTDNEP1-209ENST00000574205 GH1P01241 217 aa37.69■■■■□ 3.62
CTDNEP1-209ENST00000574205 MYCNP04198 464 aaPredicted RBP37.69■■■■□ 3.62
CTDNEP1-209ENST00000574205 CST5P28325 142 aaPredicted RBP37.69■■■■□ 3.62
CTDNEP1-209ENST00000574205 KLHDC9Q8NEP7 349 aa37.69■■■■□ 3.62
CTDNEP1-209ENST00000574205 OR6J1Q8NGC5 347 aa37.69■■■■□ 3.62
CTDNEP1-209ENST00000574205 FAM86B1E9PN63 330 aa37.68■■■■□ 3.62
CTDNEP1-209ENST00000574205 MEIS1O00470 390 aa37.68■■■■□ 3.62
CTDNEP1-209ENST00000574205 FAM86B2P0C5J1 330 aa37.68■■■■□ 3.62
CTDNEP1-209ENST00000574205 UBA1P22314 1058 aaKnown RBP37.68■■■■□ 3.62
CTDNEP1-209ENST00000574205 MNX1P50219 401 aaPredicted RBP37.68■■■■□ 3.62
CTDNEP1-209ENST00000574205 SP2Q02086 613 aa37.68■■■■□ 3.62
CTDNEP1-209ENST00000574205 INF2Q27J81 1249 aa37.68■■■■□ 3.62
CTDNEP1-209ENST00000574205 KBTBD13C9JR72 458 aa37.67■■■■□ 3.62
CTDNEP1-209ENST00000574205 SENP7Q9BQF6 1050 aa37.67■■■■□ 3.62
CTDNEP1-209ENST00000574205 FOXP1Q9H334 677 aaPredicted RBP37.67■■■■□ 3.62
CTDNEP1-209ENST00000574205 KCNH7Q9NS40 1196 aa37.67■■■■□ 3.62
CTDNEP1-209ENST00000574205 MYADML2A6NDP7 307 aa37.66■■■■□ 3.62
CTDNEP1-209ENST00000574205 CTAGE5O15320 804 aa37.66■■■■□ 3.62
CTDNEP1-209ENST00000574205 EDIL3O43854 480 aa37.66■■■■□ 3.62
CTDNEP1-209ENST00000574205 CAPN15O75808 1086 aa37.66■■■■□ 3.62
CTDNEP1-209ENST00000574205 FARP2O94887 1054 aaPredicted RBP37.66■■■■□ 3.62
CTDNEP1-209ENST00000574205 NEDD9Q14511 834 aa37.66■■■■□ 3.62
CTDNEP1-209ENST00000574205 LARP1BQ659C4 914 aaKnown RBP37.66■■■■□ 3.62
CTDNEP1-209ENST00000574205 EMID1Q96A84 441 aaPredicted RBP37.66■■■■□ 3.62
CTDNEP1-209ENST00000574205 IGLV3-22A0A075B6J6 115 aa37.66■■■■□ 3.62
CTDNEP1-209ENST00000574205 IRX5P78411 483 aaPredicted RBP37.66■■■■□ 3.62
CTDNEP1-209ENST00000574205 SETQ01105 290 aaPredicted RBP37.66■■■■□ 3.62
CTDNEP1-209ENST00000574205 ARHGAP1Q07960 439 aa37.66■■■■□ 3.62
CTDNEP1-209ENST00000574205 FSCN1Q16658 493 aaKnown RBP37.66■■■■□ 3.62
CTDNEP1-209ENST00000574205 EARS2Q5JPH6 523 aaKnown RBP37.66■■■■□ 3.62
CTDNEP1-209ENST00000574205 NEK8Q86SG6 692 aa37.66■■■■□ 3.62
CTDNEP1-209ENST00000574205 DHX37Q8IY37 1157 aaKnown RBP37.66■■■■□ 3.62
CTDNEP1-209ENST00000574205 GGPS1O95749 300 aa37.65■■■■□ 3.62
CTDNEP1-209ENST00000574205 CPT1AP50416 773 aa37.65■■■■□ 3.62
CTDNEP1-209ENST00000574205 LAMC2Q13753 1193 aa37.65■■■■□ 3.62
CTDNEP1-209ENST00000574205 GNASQ5JWF2 1037 aa37.65■■■■□ 3.62
CTDNEP1-209ENST00000574205 CELF3Q5SZQ8 465 aaKnown RBP37.65■■■■□ 3.62
CTDNEP1-209ENST00000574205 PCSK9Q8NBP7 692 aaKnown RBP37.65■■■■□ 3.62
CTDNEP1-209ENST00000574205 TSEN34Q9BSV6 310 aaKnown RBP37.65■■■■□ 3.62
CTDNEP1-209ENST00000574205 H3BQV1 296 aa37.64■■■■□ 3.62
CTDNEP1-209ENST00000574205 HSP90AA1P07900 732 aaKnown RBP37.64■■■■□ 3.62
CTDNEP1-209ENST00000574205 GNL2Q13823 731 aaKnown RBP37.64■■■■□ 3.62
CTDNEP1-209ENST00000574205 IFFO2Q5TF58 517 aa37.64■■■■□ 3.62
CTDNEP1-209ENST00000574205 MYSM1Q5VVJ2 828 aa37.64■■■■□ 3.62
CTDNEP1-209ENST00000574205 CCSAPQ6IQ19 270 aaPredicted RBP37.64■■■■□ 3.62
CTDNEP1-209ENST00000574205 MOXD1Q6UVY6 613 aa37.64■■■■□ 3.62
CTDNEP1-209ENST00000574205 UBE2Q1Q7Z7E8 422 aa37.64■■■■□ 3.62
CTDNEP1-209ENST00000574205 PLA2G4DQ86XP0 818 aa37.64■■■■□ 3.62
CTDNEP1-209ENST00000574205 GIMAP8Q8ND71 665 aaPredicted RBP37.64■■■■□ 3.62
CTDNEP1-209ENST00000574205 FOXD4L1Q9NU39 408 aa37.64■■■■□ 3.62
CTDNEP1-209ENST00000574205 KCNA2P16389 499 aa37.63■■■■□ 3.61
CTDNEP1-209ENST00000574205 PDCP20941 246 aa37.63■■■■□ 3.61
CTDNEP1-209ENST00000574205 BEX3Q00994 111 aa37.63■■■■□ 3.61
CTDNEP1-209ENST00000574205 DIS3LQ8TF46 1054 aaKnown RBP37.63■■■■□ 3.61
CTDNEP1-209ENST00000574205 DOCK5Q9H7D0 1870 aa37.63■■■■□ 3.61
CTDNEP1-209ENST00000574205 CYP3A7-CYP3A51PA0A087WV96 503 aa37.62■■■■□ 3.61
CTDNEP1-209ENST00000574205 ATP9AO75110 1047 aa37.62■■■■□ 3.61
CTDNEP1-209ENST00000574205 ARP10275 920 aa37.62■■■■□ 3.61
CTDNEP1-209ENST00000574205 CYP3A7P24462 503 aa37.62■■■■□ 3.61
CTDNEP1-209ENST00000574205 KCNA10Q16322 511 aa37.62■■■■□ 3.61
CTDNEP1-209ENST00000574205 PRR16Q569H4 304 aa37.62■■■■□ 3.61
CTDNEP1-209ENST00000574205 BRDTQ58F21 947 aaPredicted RBP37.62■■■■□ 3.61
CTDNEP1-209ENST00000574205 PAWRQ96IZ0 340 aaKnown RBP37.62■■■■□ 3.61
CTDNEP1-209ENST00000574205 MLXIPQ9HAP2 919 aa37.62■■■■□ 3.61
CTDNEP1-209ENST00000574205 FAM205CA6NFA0 338 aa37.61■■■■□ 3.61
CTDNEP1-209ENST00000574205 MOXD2PA6NHM9 499 aa37.61■■■■□ 3.61
CTDNEP1-209ENST00000574205 A6NJR5 290 aa37.61■■■■□ 3.61
CTDNEP1-209ENST00000574205 ZEB2O60315 1214 aa37.61■■■■□ 3.61
CTDNEP1-209ENST00000574205 LETM2Q2VYF4 491 aa37.61■■■■□ 3.61
CTDNEP1-209ENST00000574205 METTL7BQ6UX53 244 aa37.61■■■■□ 3.61
CTDNEP1-209ENST00000574205 NECAB2Q7Z6G3 386 aa37.61■■■■□ 3.61
CTDNEP1-209ENST00000574205 U2AF2P26368 475 aaKnown RBP eCLIP37.61■■■■□ 3.61
CTDNEP1-209ENST00000574205 NOSTRINQ8IVI9 506 aa37.61■■■■□ 3.61
CTDNEP1-209ENST00000574205 NAP1L4Q99733 375 aaKnown RBP37.61■■■■□ 3.61
CTDNEP1-209ENST00000574205 AGO4Q9HCK5 861 aaKnown RBP37.61■■■■□ 3.61
CTDNEP1-209ENST00000574205 PHF24Q9UPV7 400 aa37.61■■■■□ 3.61
CTDNEP1-209ENST00000574205 MKI67P46013 3256 aaKnown RBP37.6■■■■□ 3.61
CTDNEP1-209ENST00000574205 COL6A1P12109 1028 aa37.6■■■■□ 3.61
CTDNEP1-209ENST00000574205 CYFIP1Q7L576 1253 aa37.6■■■■□ 3.61
CTDNEP1-209ENST00000574205 PPTC7Q8NI37 304 aa37.6■■■■□ 3.61
CTDNEP1-209ENST00000574205 AFG1LQ8WV93 481 aa37.6■■■■□ 3.61
CTDNEP1-209ENST00000574205 LENG9Q96B70 501 aa37.6■■■■□ 3.61
CTDNEP1-209ENST00000574205 TDP2O95551 362 aa37.59■■■■□ 3.61
CTDNEP1-209ENST00000574205 ASGR1P07306 291 aa37.59■■■■□ 3.61
CTDNEP1-209ENST00000574205 GCFC2P16383 781 aaKnown RBP37.59■■■■□ 3.61
CTDNEP1-209ENST00000574205 ACLYP53396 1101 aa37.59■■■■□ 3.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms