RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 MLXIPQ9HAP2 919 aa29.99■■■□□ 2.39
NPLOC4-215ENST00000574095 NOD1Q9Y239 953 aa29.99■■■□□ 2.39
NPLOC4-215ENST00000574095 SCN5AQ14524 2016 aa29.98■■■□□ 2.39
NPLOC4-215ENST00000574095 KLF18A0A0U1RQI7 1052 aa29.98■■■□□ 2.39
NPLOC4-215ENST00000574095 STAM2O75886 525 aa29.98■■■□□ 2.39
NPLOC4-215ENST00000574095 PTGISQ16647 500 aa29.98■■■□□ 2.39
NPLOC4-215ENST00000574095 GNPTABQ3T906 1256 aa29.98■■■□□ 2.39
NPLOC4-215ENST00000574095 GDF6Q6KF10 455 aaPredicted RBP29.98■■■□□ 2.39
NPLOC4-215ENST00000574095 OTOP2Q7RTS6 562 aa29.98■■■□□ 2.39
NPLOC4-215ENST00000574095 HEATR3Q7Z4Q2 680 aa29.98■■■□□ 2.39
NPLOC4-215ENST00000574095 RPUSD2Q8IZ73 545 aaKnown RBP29.98■■■□□ 2.39
NPLOC4-215ENST00000574095 HERVK_113Q902F9 699 aa29.98■■■□□ 2.39
NPLOC4-215ENST00000574095 VWCEQ96DN2 955 aa29.98■■■□□ 2.39
NPLOC4-215ENST00000574095 JAKMIP1Q96N16 626 aaKnown RBP29.98■■■□□ 2.39
NPLOC4-215ENST00000574095 TTYH1Q9H313 450 aaPredicted RBP29.98■■■□□ 2.39
NPLOC4-215ENST00000574095 SNX14Q9Y5W7 946 aa29.98■■■□□ 2.39
NPLOC4-215ENST00000574095 CNTNAP5Q8WYK1 1306 aa29.97■■■□□ 2.39
NPLOC4-215ENST00000574095 DOCK5Q9H7D0 1870 aa29.97■■■□□ 2.39
NPLOC4-215ENST00000574095 GRXCR1A8MXD5 290 aa29.97■■■□□ 2.39
NPLOC4-215ENST00000574095 PPFIA4O75335 1185 aa29.97■■■□□ 2.39
NPLOC4-215ENST00000574095 UBE2SQ16763 222 aa29.97■■■□□ 2.39
NPLOC4-215ENST00000574095 SESTD1Q86VW0 696 aa29.97■■■□□ 2.39
NPLOC4-215ENST00000574095 INPP4AQ96PE3 977 aaPredicted RBP29.97■■■□□ 2.39
NPLOC4-215ENST00000574095 CXXC1Q9P0U4 656 aaPredicted RBP29.97■■■□□ 2.39
NPLOC4-215ENST00000574095 TRIP12Q14669 1992 aaPredicted RBP29.97■■■□□ 2.39
NPLOC4-215ENST00000574095 GOLGA8AA7E2F4 631 aa29.96■■■□□ 2.39
NPLOC4-215ENST00000574095 GOLGA8BA8MQT2 603 aa29.96■■■□□ 2.39
NPLOC4-215ENST00000574095 SPATA31C2B4DYI2 1134 aa29.96■■■□□ 2.39
NPLOC4-215ENST00000574095 HOXD8P13378 290 aaPredicted RBP29.96■■■□□ 2.39
NPLOC4-215ENST00000574095 ICAM3P32942 547 aa29.96■■■□□ 2.39
NPLOC4-215ENST00000574095 FGD1P98174 961 aa29.96■■■□□ 2.39
NPLOC4-215ENST00000574095 SEMA3FQ13275 785 aa29.96■■■□□ 2.39
NPLOC4-215ENST00000574095 MFSD10Q14728 455 aa29.96■■■□□ 2.39
NPLOC4-215ENST00000574095 KIAA0753Q2KHM9 967 aa29.96■■■□□ 2.39
NPLOC4-215ENST00000574095 PCNX4Q63HM2 1172 aa29.96■■■□□ 2.39
NPLOC4-215ENST00000574095 KATNAL1Q9BW62 490 aa29.96■■■□□ 2.39
NPLOC4-215ENST00000574095 HDAC6Q9UBN7 1215 aa29.96■■■□□ 2.39
NPLOC4-215ENST00000574095 NAP1L2Q9ULW6 460 aaPredicted RBP29.96■■■□□ 2.39
NPLOC4-215ENST00000574095 F2P00734 622 aa29.95■■■□□ 2.39
NPLOC4-215ENST00000574095 Q6ZUG5 572 aa29.95■■■□□ 2.39
NPLOC4-215ENST00000574095 DEFB128Q7Z7B8 93 aa29.95■■■□□ 2.39
NPLOC4-215ENST00000574095 C7orf31Q8N865 590 aa29.95■■■□□ 2.39
NPLOC4-215ENST00000574095 RETREG2Q8NC44 543 aa29.95■■■□□ 2.39
NPLOC4-215ENST00000574095 GTF2IRD1Q9UHL9 959 aa29.95■■■□□ 2.39
NPLOC4-215ENST00000574095 HAS3O00219 553 aa29.94■■■□□ 2.38
NPLOC4-215ENST00000574095 FIBPO43427 364 aa29.94■■■□□ 2.38
NPLOC4-215ENST00000574095 DNAJB2P25686 324 aa29.94■■■□□ 2.38
NPLOC4-215ENST00000574095 FUT2Q10981 343 aa29.94■■■□□ 2.38
NPLOC4-215ENST00000574095 BFSP2Q13515 415 aa29.94■■■□□ 2.38
NPLOC4-215ENST00000574095 WWC2Q6AWC2 1192 aa29.94■■■□□ 2.38
NPLOC4-215ENST00000574095 CTAGE1Q96RT6 745 aa29.94■■■□□ 2.38
NPLOC4-215ENST00000574095 CDX2Q99626 313 aaPredicted RBP29.94■■■□□ 2.38
NPLOC4-215ENST00000574095 FAM217BQ9NTX9 383 aaPredicted RBP29.94■■■□□ 2.38
NPLOC4-215ENST00000574095 V9GY48 417 aaPredicted RBP29.94■■■□□ 2.38
NPLOC4-215ENST00000574095 PITPNM1O00562 1244 aa29.93■■■□□ 2.38
NPLOC4-215ENST00000574095 REC8O95072 547 aa29.93■■■□□ 2.38
NPLOC4-215ENST00000574095 IQCF3P0C7M6 154 aa29.93■■■□□ 2.38
NPLOC4-215ENST00000574095 CDC27P30260 824 aa29.93■■■□□ 2.38
NPLOC4-215ENST00000574095 PBX2P40425 430 aa29.93■■■□□ 2.38
NPLOC4-215ENST00000574095 APOBRQ0VD83 1088 aa29.93■■■□□ 2.38
NPLOC4-215ENST00000574095 NEDD9Q14511 834 aa29.93■■■□□ 2.38
NPLOC4-215ENST00000574095 XRRA1Q6P2D8 792 aa29.93■■■□□ 2.38
NPLOC4-215ENST00000574095 BLOC1S2Q6QNY1 142 aa29.93■■■□□ 2.38
NPLOC4-215ENST00000574095 CYFIP1Q7L576 1253 aa29.93■■■□□ 2.38
NPLOC4-215ENST00000574095 MTIF3Q9H2K0 278 aaKnown RBP29.93■■■□□ 2.38
NPLOC4-215ENST00000574095 C16orf70Q9BSU1 422 aa29.92■■■□□ 2.38
NPLOC4-215ENST00000574095 PBX4Q9BYU1 374 aa29.92■■■□□ 2.38
NPLOC4-215ENST00000574095 PCDHA6Q9UN73 950 aa29.92■■■□□ 2.38
NPLOC4-215ENST00000574095 PCDHA8Q9Y5H6 950 aa29.92■■■□□ 2.38
NPLOC4-215ENST00000574095 SPDYE3A6NKU9 549 aa29.91■■■□□ 2.38
NPLOC4-215ENST00000574095 TYW1BQ6NUM6 668 aa29.91■■■□□ 2.38
NPLOC4-215ENST00000574095 METTL7BQ6UX53 244 aa29.91■■■□□ 2.38
NPLOC4-215ENST00000574095 NLRX1Q86UT6 975 aa29.91■■■□□ 2.38
NPLOC4-215ENST00000574095 BRF1Q92994 677 aa29.91■■■□□ 2.38
NPLOC4-215ENST00000574095 TANC1Q9C0D5 1861 aa29.91■■■□□ 2.38
NPLOC4-215ENST00000574095 NOP56O00567 594 aaKnown RBP29.9■■■□□ 2.38
NPLOC4-215ENST00000574095 ADD1P35611 737 aaKnown RBP29.9■■■□□ 2.38
NPLOC4-215ENST00000574095 NAPAP54920 295 aa29.9■■■□□ 2.38
NPLOC4-215ENST00000574095 DHX38Q92620 1227 aaKnown RBP29.9■■■□□ 2.38
NPLOC4-215ENST00000574095 TIFAQ96CG3 184 aa29.9■■■□□ 2.38
NPLOC4-215ENST00000574095 TELO2Q9Y4R8 837 aa29.9■■■□□ 2.38
NPLOC4-215ENST00000574095 TMEM265A0A087WTH1 108 aa29.89■■■□□ 2.38
NPLOC4-215ENST00000574095 ZBBXA8MT70 800 aa29.89■■■□□ 2.38
NPLOC4-215ENST00000574095 PFKMP08237 780 aa29.89■■■□□ 2.38
NPLOC4-215ENST00000574095 RPS6KB1P23443 525 aa29.89■■■□□ 2.38
NPLOC4-215ENST00000574095 RFC2P35250 354 aa29.89■■■□□ 2.38
NPLOC4-215ENST00000574095 METAP2P50579 478 aaKnown RBP eCLIP29.89■■■□□ 2.38
NPLOC4-215ENST00000574095 RCAN1P53805 252 aa29.89■■■□□ 2.38
NPLOC4-215ENST00000574095 ZNF200P98182 395 aaPredicted RBP29.89■■■□□ 2.38
NPLOC4-215ENST00000574095 CCDC155Q8N6L0 562 aa29.89■■■□□ 2.38
NPLOC4-215ENST00000574095 SLC17A8Q8NDX2 589 aa29.89■■■□□ 2.38
NPLOC4-215ENST00000574095 CAGE1Q8TC20 777 aa29.89■■■□□ 2.38
NPLOC4-215ENST00000574095 GBF1Q92538 1859 aa29.89■■■□□ 2.37
NPLOC4-215ENST00000574095 LGALS2P05162 132 aa29.88■■■□□ 2.37
NPLOC4-215ENST00000574095 HIC1Q14526 733 aa29.88■■■□□ 2.37
NPLOC4-215ENST00000574095 MYLIPQ8WY64 445 aa29.88■■■□□ 2.37
NPLOC4-215ENST00000574095 GPR20Q99678 358 aa29.88■■■□□ 2.37
NPLOC4-215ENST00000574095 SENP7Q9BQF6 1050 aa29.88■■■□□ 2.37
NPLOC4-215ENST00000574095 SLC4A7Q9Y6M7 1214 aa29.88■■■□□ 2.37
NPLOC4-215ENST00000574095 H3BRB1 525 aa29.87■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms