RNA–Protein interactions for RNA: ENST00000573857.5

TVP23A-208, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-208ENST00000573857 BAIAP3O94812 1187 aa16.55■□□□□ 0.24
TVP23A-208ENST00000573857 GGPS1O95749 300 aa16.55■□□□□ 0.24
TVP23A-208ENST00000573857 CA3P07451 260 aa16.55■□□□□ 0.24
TVP23A-208ENST00000573857 TGFB3P10600 412 aa16.55■□□□□ 0.24
TVP23A-208ENST00000573857 SELPP16109 830 aa16.55■□□□□ 0.24
TVP23A-208ENST00000573857 UBA1P22314 1058 aaKnown RBP16.55■□□□□ 0.24
TVP23A-208ENST00000573857 SP2Q02086 613 aa16.55■□□□□ 0.24
TVP23A-208ENST00000573857 GPNMBQ14956 572 aa16.55■□□□□ 0.24
TVP23A-208ENST00000573857 KIAA0753Q2KHM9 967 aa16.55■□□□□ 0.24
TVP23A-208ENST00000573857 HSDL1Q3SXM5 330 aa16.55■□□□□ 0.24
TVP23A-208ENST00000573857 LRRC8DQ7L1W4 858 aa16.55■□□□□ 0.24
TVP23A-208ENST00000573857 ALG1Q9BT22 464 aa16.55■□□□□ 0.24
TVP23A-208ENST00000573857 LY9Q9HBG7 655 aa16.55■□□□□ 0.24
TVP23A-208ENST00000573857 BAZ2BQ9UIF8 2168 aaKnown RBP16.55■□□□□ 0.24
TVP23A-208ENST00000573857 FRMPD4Q14CM0 1322 aa16.54■□□□□ 0.24
TVP23A-208ENST00000573857 SORBS3O60504 671 aa16.54■□□□□ 0.24
TVP23A-208ENST00000573857 DDAH1O94760 285 aa16.54■□□□□ 0.24
TVP23A-208ENST00000573857 CKBP12277 381 aa16.54■□□□□ 0.24
TVP23A-208ENST00000573857 TJAP1Q5JTD0 557 aa16.54■□□□□ 0.24
TVP23A-208ENST00000573857 HERC6Q8IVU3 1022 aa16.54■□□□□ 0.24
TVP23A-208ENST00000573857 PIBF1Q8WXW3 757 aa16.54■□□□□ 0.24
TVP23A-208ENST00000573857 SYMPKQ92797 1274 aaKnown RBP16.54■□□□□ 0.24
TVP23A-208ENST00000573857 GPKOWQ92917 476 aaPredicted RBP eCLIP16.54■□□□□ 0.24
TVP23A-208ENST00000573857 ZFP91Q96JP5 570 aaPredicted RBP16.54■□□□□ 0.24
TVP23A-208ENST00000573857 MAP3K14Q99558 947 aa16.54■□□□□ 0.24
TVP23A-208ENST00000573857 SPZ1Q9BXG8 430 aa16.54■□□□□ 0.24
TVP23A-208ENST00000573857 TET1Q8NFU7 2136 aa16.54■□□□□ 0.24
TVP23A-208ENST00000573857 PARNO95453 639 aaKnown RBP16.53■□□□□ 0.24
TVP23A-208ENST00000573857 PTK7Q13308 1070 aa16.53■□□□□ 0.24
TVP23A-208ENST00000573857 CCDC85BQ15834 202 aaPredicted RBP16.53■□□□□ 0.24
TVP23A-208ENST00000573857 ZNF654Q8IZM8 581 aa16.53■□□□□ 0.24
TVP23A-208ENST00000573857 MYL10Q9BUA6 226 aa16.53■□□□□ 0.24
TVP23A-208ENST00000573857 PRC1O43663 620 aa16.52■□□□□ 0.24
TVP23A-208ENST00000573857 NBNO60934 754 aa16.52■□□□□ 0.24
TVP23A-208ENST00000573857 CXCL10P02778 98 aa16.52■□□□□ 0.24
TVP23A-208ENST00000573857 KIF5BP33176 963 aa16.52■□□□□ 0.24
TVP23A-208ENST00000573857 KCNJ6P48051 423 aa16.52■□□□□ 0.24
TVP23A-208ENST00000573857 MRPS9P82933 396 aaKnown RBP16.52■□□□□ 0.24
TVP23A-208ENST00000573857 ZNF200P98182 395 aaPredicted RBP16.52■□□□□ 0.24
TVP23A-208ENST00000573857 TRIM71Q2Q1W2 868 aaKnown RBP16.52■□□□□ 0.24
TVP23A-208ENST00000573857 TRAF7Q6Q0C0 670 aa16.52■□□□□ 0.24
TVP23A-208ENST00000573857 CASC1Q6TDU7 716 aa16.52■□□□□ 0.24
TVP23A-208ENST00000573857 CTCFLQ8NI51 663 aaPredicted RBP16.52■□□□□ 0.24
TVP23A-208ENST00000573857 ATXN2LQ8WWM7 1075 aaKnown RBP16.52■□□□□ 0.24
TVP23A-208ENST00000573857 WNT8BQ93098 351 aa16.52■□□□□ 0.24
TVP23A-208ENST00000573857 RRP36Q96EU6 259 aaKnown RBP16.52■□□□□ 0.24
TVP23A-208ENST00000573857 INPP4AQ96PE3 977 aaPredicted RBP16.52■□□□□ 0.24
TVP23A-208ENST00000573857 C16orf70Q9BSU1 422 aa16.52■□□□□ 0.24
TVP23A-208ENST00000573857 MTA3Q9BTC8 594 aa16.52■□□□□ 0.24
TVP23A-208ENST00000573857 LSG1Q9H089 658 aaKnown RBP16.52■□□□□ 0.24
TVP23A-208ENST00000573857 MLXIPQ9HAP2 919 aa16.52■□□□□ 0.24
TVP23A-208ENST00000573857 THEGQ9P2T0 379 aa16.52■□□□□ 0.24
TVP23A-208ENST00000573857 KIF28PB7ZC32 967 aa16.51■□□□□ 0.23
TVP23A-208ENST00000573857 STAM2O75886 525 aa16.51■□□□□ 0.23
TVP23A-208ENST00000573857 ARHGEF15O94989 841 aa16.51■□□□□ 0.23
TVP23A-208ENST00000573857 SMARCA1P28370 1054 aa16.51■□□□□ 0.23
TVP23A-208ENST00000573857 ICAM3P32942 547 aa16.51■□□□□ 0.23
TVP23A-208ENST00000573857 WDR5P61964 334 aaKnown RBP16.51■□□□□ 0.23
TVP23A-208ENST00000573857 HIC1Q14526 733 aa16.51■□□□□ 0.23
TVP23A-208ENST00000573857 GNPTABQ3T906 1256 aa16.51■□□□□ 0.23
TVP23A-208ENST00000573857 CNKSR3Q6P9H4 555 aa16.51■□□□□ 0.23
TVP23A-208ENST00000573857 BCAS3Q9H6U6 928 aa16.51■□□□□ 0.23
TVP23A-208ENST00000573857 TRIP12Q14669 1992 aaPredicted RBP16.51■□□□□ 0.23
TVP23A-208ENST00000573857 SH2B2O14492 632 aaPredicted RBP16.5■□□□□ 0.23
TVP23A-208ENST00000573857 SLC27A2O14975 620 aa16.5■□□□□ 0.23
TVP23A-208ENST00000573857 TLL1O43897 1013 aa16.5■□□□□ 0.23
TVP23A-208ENST00000573857 MCM5P33992 734 aa16.5■□□□□ 0.23
TVP23A-208ENST00000573857 TAP1Q03518 808 aa16.5■□□□□ 0.23
TVP23A-208ENST00000573857 SEMA3FQ13275 785 aa16.5■□□□□ 0.23
TVP23A-208ENST00000573857 COL9A3Q14050 684 aaPredicted RBP16.5■□□□□ 0.23
TVP23A-208ENST00000573857 TCTN1Q2MV58 587 aa16.5■□□□□ 0.23
TVP23A-208ENST00000573857 ZNF618Q5T7W0 954 aa16.5■□□□□ 0.23
TVP23A-208ENST00000573857 ERICH6BQ5W0A0 696 aa16.5■□□□□ 0.23
TVP23A-208ENST00000573857 NFXL1Q6ZNB6 911 aa16.5■□□□□ 0.23
TVP23A-208ENST00000573857 SERINC5Q86VE9 423 aa16.5■□□□□ 0.23
TVP23A-208ENST00000573857 TMTC2Q8N394 836 aa16.5■□□□□ 0.23
TVP23A-208ENST00000573857 TMEM87BQ96K49 555 aa16.5■□□□□ 0.23
TVP23A-208ENST00000573857 LZTS2Q9BRK4 669 aa16.5■□□□□ 0.23
TVP23A-208ENST00000573857 ESYT1Q9BSJ8 1104 aa16.5■□□□□ 0.23
TVP23A-208ENST00000573857 CERS4Q9HA82 394 aa16.5■□□□□ 0.23
TVP23A-208ENST00000573857 SEC63Q9UGP8 760 aaKnown RBP16.5■□□□□ 0.23
TVP23A-208ENST00000573857 ABHD14A-ACY1A0A1B0GW23 586 aa16.49■□□□□ 0.23
TVP23A-208ENST00000573857 EPOPA6NHQ4 379 aa16.49■□□□□ 0.23
TVP23A-208ENST00000573857 SPATA31C2B4DYI2 1134 aa16.49■□□□□ 0.23
TVP23A-208ENST00000573857 H3BRB1 525 aa16.49■□□□□ 0.23
TVP23A-208ENST00000573857 RFXAPO00287 272 aa16.49■□□□□ 0.23
TVP23A-208ENST00000573857 PIK3CDO00329 1044 aa16.49■□□□□ 0.23
TVP23A-208ENST00000573857 NOP56O00567 594 aaKnown RBP16.49■□□□□ 0.23
TVP23A-208ENST00000573857 FIBPO43427 364 aa16.49■□□□□ 0.23
TVP23A-208ENST00000573857 PLEKHA8P1O95397 391 aa16.49■□□□□ 0.23
TVP23A-208ENST00000573857 LGALS2P05162 132 aa16.49■□□□□ 0.23
TVP23A-208ENST00000573857 HOXC8P31273 242 aa16.49■□□□□ 0.23
TVP23A-208ENST00000573857 GNAQP50148 359 aa16.49■□□□□ 0.23
TVP23A-208ENST00000573857 DEFB103AP81534 67 aa16.49■□□□□ 0.23
TVP23A-208ENST00000573857 MBTPS1Q14703 1052 aa16.49■□□□□ 0.23
TVP23A-208ENST00000573857 PCNX4Q63HM2 1172 aa16.49■□□□□ 0.23
TVP23A-208ENST00000573857 USP17L6PQ6QN14 398 aa16.49■□□□□ 0.23
TVP23A-208ENST00000573857 METTL7BQ6UX53 244 aa16.49■□□□□ 0.23
TVP23A-208ENST00000573857 MICALL1Q8N3F8 863 aa16.49■□□□□ 0.23
TVP23A-208ENST00000573857 SRBD1Q8N5C6 995 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms