RNA–Protein interactions for RNA: ENST00000572980.5

TVP23A-206, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-206ENST00000572980 RARBP10826 455 aa26.46■■□□□ 1.83
TVP23A-206ENST00000572980 DUSP28Q4G0W2 176 aa26.46■■□□□ 1.83
TVP23A-206ENST00000572980 PRR16Q569H4 304 aa26.46■■□□□ 1.83
TVP23A-206ENST00000572980 CCDC62Q6P9F0 684 aa26.46■■□□□ 1.83
TVP23A-206ENST00000572980 FERMT3Q86UX7 667 aa26.46■■□□□ 1.83
TVP23A-206ENST00000572980 PAK6Q9NQU5 681 aaPredicted RBP26.46■■□□□ 1.83
TVP23A-206ENST00000572980 KCNH7Q9NS40 1196 aa26.46■■□□□ 1.83
TVP23A-206ENST00000572980 DDX41Q9UJV9 622 aaKnown RBP26.46■■□□□ 1.83
TVP23A-206ENST00000572980 CENPFP49454 3210 aa26.46■■□□□ 1.83
TVP23A-206ENST00000572980 IGLV3-22A0A075B6J6 115 aa26.46■■□□□ 1.83
TVP23A-206ENST00000572980 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.46■■□□□ 1.83
TVP23A-206ENST00000572980 SMPD1P17405 629 aa26.46■■□□□ 1.83
TVP23A-206ENST00000572980 ZSCAN16Q9H4T2 348 aaPredicted RBP26.46■■□□□ 1.83
TVP23A-206ENST00000572980 DUSP11O75319 330 aaKnown RBP26.45■■□□□ 1.82
TVP23A-206ENST00000572980 TDP2O95551 362 aa26.45■■□□□ 1.82
TVP23A-206ENST00000572980 ATP2B1P20020 1258 aa26.45■■□□□ 1.82
TVP23A-206ENST00000572980 Q4G0T1 1027 aa26.45■■□□□ 1.82
TVP23A-206ENST00000572980 RILPL1Q5EBL4 403 aa26.45■■□□□ 1.82
TVP23A-206ENST00000572980 DDX25Q9UHL0 483 aaKnown RBP26.45■■□□□ 1.82
TVP23A-206ENST00000572980 ARIH2O95376 493 aa26.44■■□□□ 1.82
TVP23A-206ENST00000572980 LY6KQ17RY6 165 aa26.44■■□□□ 1.82
TVP23A-206ENST00000572980 MBOAT7Q96N66 472 aa26.44■■□□□ 1.82
TVP23A-206ENST00000572980 SENP7Q9BQF6 1050 aa26.44■■□□□ 1.82
TVP23A-206ENST00000572980 TMEM106CQ9BVX2 250 aa26.44■■□□□ 1.82
TVP23A-206ENST00000572980 Q9Y3F1 56 aa26.44■■□□□ 1.82
TVP23A-206ENST00000572980 ZSCAN22P10073 491 aaPredicted RBP26.43■■□□□ 1.82
TVP23A-206ENST00000572980 ARP10275 920 aa26.43■■□□□ 1.82
TVP23A-206ENST00000572980 SEMA3FQ13275 785 aa26.43■■□□□ 1.82
TVP23A-206ENST00000572980 NEDD9Q14511 834 aa26.43■■□□□ 1.82
TVP23A-206ENST00000572980 ANO1Q5XXA6 986 aa26.43■■□□□ 1.82
TVP23A-206ENST00000572980 GIMAP8Q8ND71 665 aaPredicted RBP26.43■■□□□ 1.82
TVP23A-206ENST00000572980 DEFB118Q96PH6 123 aa26.43■■□□□ 1.82
TVP23A-206ENST00000572980 GNEQ9Y223 722 aaKnown RBP26.43■■□□□ 1.82
TVP23A-206ENST00000572980 ADCY6O43306 1168 aa26.42■■□□□ 1.82
TVP23A-206ENST00000572980 GJB1P08034 283 aa26.42■■□□□ 1.82
TVP23A-206ENST00000572980 RESTQ13127 1097 aa26.42■■□□□ 1.82
TVP23A-206ENST00000572980 LENG9Q96B70 501 aa26.42■■□□□ 1.82
TVP23A-206ENST00000572980 SP2Q02086 613 aa26.41■■□□□ 1.82
TVP23A-206ENST00000572980 ORC2Q13416 577 aaPredicted RBP26.41■■□□□ 1.82
TVP23A-206ENST00000572980 TTC38Q5R3I4 469 aa26.41■■□□□ 1.82
TVP23A-206ENST00000572980 TMEM63BQ5T3F8 832 aa26.41■■□□□ 1.82
TVP23A-206ENST00000572980 LHX8Q68G74 356 aa26.41■■□□□ 1.82
TVP23A-206ENST00000572980 ZNF577Q9BSK1 485 aa26.41■■□□□ 1.82
TVP23A-206ENST00000572980 AP5M1Q9H0R1 490 aa26.41■■□□□ 1.82
TVP23A-206ENST00000572980 SPC25Q9HBM1 224 aa26.41■■□□□ 1.82
TVP23A-206ENST00000572980 AGO4Q9HCK5 861 aaKnown RBP26.41■■□□□ 1.82
TVP23A-206ENST00000572980 XPNPEP3Q9NQH7 507 aa26.41■■□□□ 1.82
TVP23A-206ENST00000572980 GH1P01241 217 aa26.41■■□□□ 1.82
TVP23A-206ENST00000572980 UBA1P22314 1058 aaKnown RBP26.41■■□□□ 1.82
TVP23A-206ENST00000572980 PKP1Q13835 747 aa26.41■■□□□ 1.82
TVP23A-206ENST00000572980 MYSM1Q5VVJ2 828 aa26.41■■□□□ 1.82
TVP23A-206ENST00000572980 TLK2Q86UE8 772 aa26.41■■□□□ 1.82
TVP23A-206ENST00000572980 DHX37Q8IY37 1157 aaKnown RBP26.41■■□□□ 1.82
TVP23A-206ENST00000572980 TNS4Q8IZW8 715 aa26.41■■□□□ 1.82
TVP23A-206ENST00000572980 IPO5O00410 1097 aaKnown RBP26.4■■□□□ 1.82
TVP23A-206ENST00000572980 DYNC1LI2O43237 492 aaPredicted RBP26.4■■□□□ 1.82
TVP23A-206ENST00000572980 ATP9AO75110 1047 aa26.4■■□□□ 1.82
TVP23A-206ENST00000572980 GGPS1O95749 300 aa26.4■■□□□ 1.82
TVP23A-206ENST00000572980 KCNA2P16389 499 aa26.4■■□□□ 1.82
TVP23A-206ENST00000572980 MCM7P33993 719 aa26.4■■□□□ 1.82
TVP23A-206ENST00000572980 TOB1P50616 345 aaPredicted RBP26.4■■□□□ 1.82
TVP23A-206ENST00000572980 LAMC2Q13753 1193 aa26.4■■□□□ 1.82
TVP23A-206ENST00000572980 CELF3Q5SZQ8 465 aaKnown RBP26.4■■□□□ 1.82
TVP23A-206ENST00000572980 GJC2Q5T442 439 aaPredicted RBP26.4■■□□□ 1.82
TVP23A-206ENST00000572980 LENG1Q96BZ8 264 aaPredicted RBP26.4■■□□□ 1.82
TVP23A-206ENST00000572980 IPO9Q96P70 1041 aaKnown RBP26.4■■□□□ 1.82
TVP23A-206ENST00000572980 SDF4Q9BRK5 362 aa26.4■■□□□ 1.82
TVP23A-206ENST00000572980 MLXIPQ9HAP2 919 aa26.4■■□□□ 1.82
TVP23A-206ENST00000572980 PKD2L1Q9P0L9 805 aa26.4■■□□□ 1.82
TVP23A-206ENST00000572980 SLC37A4O43826 429 aa26.39■■□□□ 1.82
TVP23A-206ENST00000572980 F13A1P00488 732 aa26.39■■□□□ 1.82
TVP23A-206ENST00000572980 ZNF174Q15697 407 aa26.39■■□□□ 1.82
TVP23A-206ENST00000572980 FOXD4L5Q5VV16 416 aaPredicted RBP26.39■■□□□ 1.82
TVP23A-206ENST00000572980 OR6J1Q8NGC5 347 aa26.39■■□□□ 1.82
TVP23A-206ENST00000572980 FOXD4L4Q8WXT5 416 aaPredicted RBP26.39■■□□□ 1.82
TVP23A-206ENST00000572980 COPS5Q92905 334 aa26.39■■□□□ 1.82
TVP23A-206ENST00000572980 TBC1D22BQ9NU19 505 aa26.39■■□□□ 1.82
TVP23A-206ENST00000572980 WNT7AO00755 349 aa26.38■■□□□ 1.81
TVP23A-206ENST00000572980 MSH4O15457 936 aa26.38■■□□□ 1.81
TVP23A-206ENST00000572980 MARCH6O60337 910 aa26.38■■□□□ 1.81
TVP23A-206ENST00000572980 NEMFO60524 1076 aa26.38■■□□□ 1.81
TVP23A-206ENST00000572980 SGPL1O95470 568 aa26.38■■□□□ 1.81
TVP23A-206ENST00000572980 BRD1O95696 1058 aa26.38■■□□□ 1.81
TVP23A-206ENST00000572980 NUCB2P80303 420 aa26.38■■□□□ 1.81
TVP23A-206ENST00000572980 U2AF1L4Q8WU68 220 aaKnown RBP26.38■■□□□ 1.81
TVP23A-206ENST00000572980 EMID1Q96A84 441 aaPredicted RBP26.38■■□□□ 1.81
TVP23A-206ENST00000572980 ABHD8Q96I13 439 aa26.38■■□□□ 1.81
TVP23A-206ENST00000572980 NFASCO94856 1347 aa26.38■■□□□ 1.81
TVP23A-206ENST00000572980 TBX3O15119 743 aa26.37■■□□□ 1.81
TVP23A-206ENST00000572980 BAG4O95429 457 aaKnown RBP26.37■■□□□ 1.81
TVP23A-206ENST00000572980 CAPN2P17655 700 aa26.37■■□□□ 1.81
TVP23A-206ENST00000572980 GJA9P57773 515 aa26.37■■□□□ 1.81
TVP23A-206ENST00000572980 ARHGAP1Q07960 439 aa26.37■■□□□ 1.81
TVP23A-206ENST00000572980 METTL7BQ6UX53 244 aa26.37■■□□□ 1.81
TVP23A-206ENST00000572980 CYFIP1Q7L576 1253 aa26.37■■□□□ 1.81
TVP23A-206ENST00000572980 FAM20AQ96MK3 541 aa26.37■■□□□ 1.81
TVP23A-206ENST00000572980 UPF3AQ9H1J1 476 aaKnown RBP26.37■■□□□ 1.81
TVP23A-206ENST00000572980 SYNRGQ9UMZ2 1314 aa26.37■■□□□ 1.81
TVP23A-206ENST00000572980 PGK1P00558 417 aa26.37■■□□□ 1.81
TVP23A-206ENST00000572980 C6orf222P0C671 652 aaPredicted RBP26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms