RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 GJB4Q9NTQ9 266 aa18.09■□□□□ 0.49
CHD3-215ENST00000572750 RTEL1Q9NZ71 1219 aa18.09■□□□□ 0.49
CHD3-215ENST00000572750 DYNC1LI2O43237 492 aaPredicted RBP18.08■□□□□ 0.48
CHD3-215ENST00000572750 GNA11P29992 359 aa18.08■□□□□ 0.48
CHD3-215ENST00000572750 FOSBP53539 338 aa18.08■□□□□ 0.48
CHD3-215ENST00000572750 FSCN1Q16658 493 aaKnown RBP18.08■□□□□ 0.48
CHD3-215ENST00000572750 LY6KQ17RY6 165 aa18.08■□□□□ 0.48
CHD3-215ENST00000572750 CCDC62Q6P9F0 684 aa18.08■□□□□ 0.48
CHD3-215ENST00000572750 TEX2Q8IWB9 1127 aa18.08■□□□□ 0.48
CHD3-215ENST00000572750 KLHDC9Q8NEP7 349 aa18.08■□□□□ 0.48
CHD3-215ENST00000572750 FERMT2Q96AC1 680 aa18.08■□□□□ 0.48
CHD3-215ENST00000572750 ZSCAN31Q96LW9 406 aaPredicted RBP18.08■□□□□ 0.48
CHD3-215ENST00000572750 FAM161BQ96MY7 647 aa18.08■□□□□ 0.48
CHD3-215ENST00000572750 INPP4AQ96PE3 977 aaPredicted RBP18.08■□□□□ 0.48
CHD3-215ENST00000572750 AP5M1Q9H0R1 490 aa18.08■□□□□ 0.48
CHD3-215ENST00000572750 EHMT1Q9H9B1 1298 aa18.08■□□□□ 0.48
CHD3-215ENST00000572750 KCNJ14Q9UNX9 436 aa18.08■□□□□ 0.48
CHD3-215ENST00000572750 SORBS3O60504 671 aa18.07■□□□□ 0.48
CHD3-215ENST00000572750 FOSP01100 380 aaPredicted RBP18.07■□□□□ 0.48
CHD3-215ENST00000572750 CST5P28325 142 aaPredicted RBP18.07■□□□□ 0.48
CHD3-215ENST00000572750 NPY5RQ15761 445 aa18.07■□□□□ 0.48
CHD3-215ENST00000572750 CCSAPQ6IQ19 270 aaPredicted RBP18.07■□□□□ 0.48
CHD3-215ENST00000572750 BICD2Q8TD16 824 aa18.07■□□□□ 0.48
CHD3-215ENST00000572750 ALG1Q9BT22 464 aa18.07■□□□□ 0.48
CHD3-215ENST00000572750 SENP6Q9GZR1 1112 aaPredicted RBP18.07■□□□□ 0.48
CHD3-215ENST00000572750 PCDHA4Q9UN74 947 aa18.07■□□□□ 0.48
CHD3-215ENST00000572750 PHF24Q9UPV7 400 aa18.07■□□□□ 0.48
CHD3-215ENST00000572750 A0A1W2PQ45 241 aaPredicted RBP18.06■□□□□ 0.48
CHD3-215ENST00000572750 A0A1W2PQY0 241 aa18.06■□□□□ 0.48
CHD3-215ENST00000572750 NKRFO15226 690 aaKnown RBP eCLIP18.06■□□□□ 0.48
CHD3-215ENST00000572750 STAM2O75886 525 aa18.06■□□□□ 0.48
CHD3-215ENST00000572750 UBA1P22314 1058 aaKnown RBP18.06■□□□□ 0.48
CHD3-215ENST00000572750 SREBF1P36956 1147 aa18.06■□□□□ 0.48
CHD3-215ENST00000572750 ACLYP53396 1101 aa18.06■□□□□ 0.48
CHD3-215ENST00000572750 ATN1P54259 1190 aaPredicted RBP18.06■□□□□ 0.48
CHD3-215ENST00000572750 ARHGAP1Q07960 439 aa18.06■□□□□ 0.48
CHD3-215ENST00000572750 SEMA3FQ13275 785 aa18.06■□□□□ 0.48
CHD3-215ENST00000572750 KCNA10Q16322 511 aa18.06■□□□□ 0.48
CHD3-215ENST00000572750 GNPTABQ3T906 1256 aa18.06■□□□□ 0.48
CHD3-215ENST00000572750 GNASQ5JWF2 1037 aa18.06■□□□□ 0.48
CHD3-215ENST00000572750 XRRA1Q6P2D8 792 aa18.06■□□□□ 0.48
CHD3-215ENST00000572750 WASF1Q92558 559 aa18.06■□□□□ 0.48
CHD3-215ENST00000572750 UBE2OQ9C0C9 1292 aaKnown RBP18.06■□□□□ 0.48
CHD3-215ENST00000572750 DDX41Q9UJV9 622 aaKnown RBP18.06■□□□□ 0.48
CHD3-215ENST00000572750 Q9Y3F1 56 aa18.06■□□□□ 0.48
CHD3-215ENST00000572750 ITGB5P18084 799 aa18.05■□□□□ 0.48
CHD3-215ENST00000572750 NKX3-2P78367 333 aa18.05■□□□□ 0.48
CHD3-215ENST00000572750 FAM109BQ6ICB4 259 aaPredicted RBP18.05■□□□□ 0.48
CHD3-215ENST00000572750 DAGLBQ8NCG7 672 aa18.05■□□□□ 0.48
CHD3-215ENST00000572750 TMX3Q96JJ7 454 aa18.05■□□□□ 0.48
CHD3-215ENST00000572750 PHF20Q9BVI0 1012 aa18.05■□□□□ 0.48
CHD3-215ENST00000572750 FIBPO43427 364 aa18.04■□□□□ 0.48
CHD3-215ENST00000572750 GH1P01241 217 aa18.04■□□□□ 0.48
CHD3-215ENST00000572750 ASGR1P07306 291 aa18.04■□□□□ 0.48
CHD3-215ENST00000572750 XBP1P17861 261 aa18.04■□□□□ 0.48
CHD3-215ENST00000572750 ARHGAP4P98171 946 aa18.04■□□□□ 0.48
CHD3-215ENST00000572750 SP2Q02086 613 aa18.04■□□□□ 0.48
CHD3-215ENST00000572750 LRRC26Q2I0M4 334 aa18.04■□□□□ 0.48
CHD3-215ENST00000572750 BLIDQ8IZY5 108 aa18.04■□□□□ 0.48
CHD3-215ENST00000572750 PCSK9Q8NBP7 692 aaKnown RBP18.04■□□□□ 0.48
CHD3-215ENST00000572750 LLPHQ9BRT6 129 aaKnown RBP18.04■□□□□ 0.48
CHD3-215ENST00000572750 TSEN34Q9BSV6 310 aaKnown RBP18.04■□□□□ 0.48
CHD3-215ENST00000572750 PKD2L1Q9P0L9 805 aa18.04■□□□□ 0.48
CHD3-215ENST00000572750 UBIAD1Q9Y5Z9 338 aa18.04■□□□□ 0.48
CHD3-215ENST00000572750 MOXD2PA6NHM9 499 aa18.03■□□□□ 0.48
CHD3-215ENST00000572750 SPATA31C2B4DYI2 1134 aa18.03■□□□□ 0.48
CHD3-215ENST00000572750 GGPS1O95749 300 aa18.03■□□□□ 0.48
CHD3-215ENST00000572750 ICAM3P32942 547 aa18.03■□□□□ 0.48
CHD3-215ENST00000572750 CPT1AP50416 773 aa18.03■□□□□ 0.48
CHD3-215ENST00000572750 MTMR1Q13613 665 aa18.03■□□□□ 0.48
CHD3-215ENST00000572750 CXCL17Q6UXB2 119 aa18.03■□□□□ 0.48
CHD3-215ENST00000572750 NLRX1Q86UT6 975 aa18.03■□□□□ 0.48
CHD3-215ENST00000572750 FAM177A1Q8N128 213 aaPredicted RBP18.03■□□□□ 0.48
CHD3-215ENST00000572750 IL27Q8NEV9 243 aa18.03■□□□□ 0.48
CHD3-215ENST00000572750 CYP2W1Q8TAV3 490 aa18.03■□□□□ 0.48
CHD3-215ENST00000572750 OXER1Q8TDS5 423 aa18.03■□□□□ 0.48
CHD3-215ENST00000572750 AFG1LQ8WV93 481 aa18.03■□□□□ 0.48
CHD3-215ENST00000572750 CRYGNQ8WXF5 182 aa18.03■□□□□ 0.48
CHD3-215ENST00000572750 GPRASP2Q96D09 838 aa18.03■□□□□ 0.48
CHD3-215ENST00000572750 BDP1A6H8Y1 2624 aa18.02■□□□□ 0.48
CHD3-215ENST00000572750 M0R2N6 131 aa18.02■□□□□ 0.48
CHD3-215ENST00000572750 MMP3P08254 477 aa18.02■□□□□ 0.48
CHD3-215ENST00000572750 MYL3P08590 195 aa18.02■□□□□ 0.48
CHD3-215ENST00000572750 MCM2P49736 904 aa18.02■□□□□ 0.48
CHD3-215ENST00000572750 MCTP2Q6DN12 878 aa18.02■□□□□ 0.48
CHD3-215ENST00000572750 GALNT17Q6IS24 598 aa18.02■□□□□ 0.48
CHD3-215ENST00000572750 KCNV1Q6PIU1 500 aa18.02■□□□□ 0.48
CHD3-215ENST00000572750 DHX37Q8IY37 1157 aaKnown RBP18.02■□□□□ 0.48
CHD3-215ENST00000572750 EMID1Q96A84 441 aaPredicted RBP18.02■□□□□ 0.48
CHD3-215ENST00000572750 BCAS3Q9H6U6 928 aa18.02■□□□□ 0.48
CHD3-215ENST00000572750 STARD7Q9NQZ5 370 aa18.02■□□□□ 0.48
CHD3-215ENST00000572750 A6NJR5 290 aa18.01■□□□□ 0.47
CHD3-215ENST00000572750 FAM86B1E9PN63 330 aa18.01■□□□□ 0.47
CHD3-215ENST00000572750 FAM86B2P0C5J1 330 aa18.01■□□□□ 0.47
CHD3-215ENST00000572750 TGFB3P10600 412 aa18.01■□□□□ 0.47
CHD3-215ENST00000572750 ZNF76P36508 570 aa18.01■□□□□ 0.47
CHD3-215ENST00000572750 CEP55Q53EZ4 464 aa18.01■□□□□ 0.47
CHD3-215ENST00000572750 CELF3Q5SZQ8 465 aaKnown RBP18.01■□□□□ 0.47
CHD3-215ENST00000572750 MYSM1Q5VVJ2 828 aa18.01■□□□□ 0.47
CHD3-215ENST00000572750 GLT1D1Q96MS3 346 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms