RNA–Protein interactions for RNA: ENST00000572290.1

NUP88-204, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-204ENST00000572290 ADCY7P51828 1080 aa23.11■■□□□ 1.29
NUP88-204ENST00000572290 FPGSQ05932 587 aa23.11■■□□□ 1.29
NUP88-204ENST00000572290 MFSD5Q6N075 450 aa23.11■■□□□ 1.29
NUP88-204ENST00000572290 NFRKBQ6P4R8 1299 aa23.11■■□□□ 1.29
NUP88-204ENST00000572290 NLRX1Q86UT6 975 aa23.11■■□□□ 1.29
NUP88-204ENST00000572290 SPATA33Q96N06 139 aa23.11■■□□□ 1.29
NUP88-204ENST00000572290 PPP1R12CQ9BZL4 782 aa23.11■■□□□ 1.29
NUP88-204ENST00000572290 EHMT1Q9H9B1 1298 aa23.11■■□□□ 1.29
NUP88-204ENST00000572290 MLXIPQ9HAP2 919 aa23.11■■□□□ 1.29
NUP88-204ENST00000572290 PDRG1Q9NUG6 133 aa23.11■■□□□ 1.29
NUP88-204ENST00000572290 SMCO2A6NFE2 343 aa23.1■■□□□ 1.29
NUP88-204ENST00000572290 SOX1O00570 391 aaPredicted RBP23.1■■□□□ 1.29
NUP88-204ENST00000572290 PRPF3O43395 683 aaKnown RBP23.1■■□□□ 1.29
NUP88-204ENST00000572290 SUPT20HL2P0C7V6 817 aa23.1■■□□□ 1.29
NUP88-204ENST00000572290 SCG2P13521 617 aa23.1■■□□□ 1.29
NUP88-204ENST00000572290 CHMP4BP1P59074 171 aa23.1■■□□□ 1.29
NUP88-204ENST00000572290 CCT2P78371 535 aaKnown RBP23.1■■□□□ 1.29
NUP88-204ENST00000572290 AKAP17AQ02040 695 aaKnown RBP23.1■■□□□ 1.29
NUP88-204ENST00000572290 PTPN11Q06124 597 aaPredicted RBP23.1■■□□□ 1.29
NUP88-204ENST00000572290 GLT8D2Q9H1C3 349 aa23.1■■□□□ 1.29
NUP88-204ENST00000572290 ANAPC15P60006 121 aa23.09■■□□□ 1.29
NUP88-204ENST00000572290 SEMA3FQ13275 785 aa23.09■■□□□ 1.29
NUP88-204ENST00000572290 NEDD9Q14511 834 aa23.09■■□□□ 1.29
NUP88-204ENST00000572290 SHHQ15465 462 aa23.09■■□□□ 1.29
NUP88-204ENST00000572290 NTRK3Q16288 839 aa23.09■■□□□ 1.29
NUP88-204ENST00000572290 HSDL1Q3SXM5 330 aa23.09■■□□□ 1.29
NUP88-204ENST00000572290 C9orf50Q5SZB4 431 aa23.09■■□□□ 1.29
NUP88-204ENST00000572290 PPP1R13LQ8WUF5 828 aa23.09■■□□□ 1.29
NUP88-204ENST00000572290 KAT2BQ92831 832 aa23.09■■□□□ 1.29
NUP88-204ENST00000572290 PHKBQ93100 1093 aa23.09■■□□□ 1.29
NUP88-204ENST00000572290 ZNF274Q96GC6 653 aaPredicted RBP23.09■■□□□ 1.29
NUP88-204ENST00000572290 HIPK3Q9H422 1215 aa23.09■■□□□ 1.29
NUP88-204ENST00000572290 NCOA5Q9HCD5 579 aaKnown RBP23.09■■□□□ 1.29
NUP88-204ENST00000572290 TRMT13Q9NUP7 481 aaKnown RBP23.09■■□□□ 1.29
NUP88-204ENST00000572290 PPFIA4O75335 1185 aa23.08■■□□□ 1.29
NUP88-204ENST00000572290 FOSP01100 380 aaPredicted RBP23.08■■□□□ 1.29
NUP88-204ENST00000572290 HOXD8P13378 290 aaPredicted RBP23.08■■□□□ 1.29
NUP88-204ENST00000572290 IFNAR1P17181 557 aa23.08■■□□□ 1.29
NUP88-204ENST00000572290 EPHB4P54760 987 aa23.08■■□□□ 1.29
NUP88-204ENST00000572290 TMEM199Q8N511 208 aa23.08■■□□□ 1.29
NUP88-204ENST00000572290 LRCH3Q96II8 777 aa23.08■■□□□ 1.29
NUP88-204ENST00000572290 LARP6Q9BRS8 491 aaKnown RBP23.08■■□□□ 1.29
NUP88-204ENST00000572290 RNF26Q9BY78 433 aaPredicted RBP23.08■■□□□ 1.29
NUP88-204ENST00000572290 CYP2C18P33260 490 aa23.07■■□□□ 1.28
NUP88-204ENST00000572290 PPIGQ13427 754 aaKnown RBP eCLIP23.07■■□□□ 1.28
NUP88-204ENST00000572290 PKN1Q16512 942 aa23.07■■□□□ 1.28
NUP88-204ENST00000572290 CCDC12Q8WUD4 166 aaPredicted RBP23.07■■□□□ 1.28
NUP88-204ENST00000572290 GPRASP2Q96D09 838 aa23.07■■□□□ 1.28
NUP88-204ENST00000572290 CDHR1Q96JP9 859 aa23.07■■□□□ 1.28
NUP88-204ENST00000572290 SENP7Q9BQF6 1050 aa23.07■■□□□ 1.28
NUP88-204ENST00000572290 NOC4LQ9BVI4 516 aaKnown RBP23.07■■□□□ 1.28
NUP88-204ENST00000572290 KATNAL1Q9BW62 490 aa23.07■■□□□ 1.28
NUP88-204ENST00000572290 SLC26A6Q9BXS9 759 aa23.07■■□□□ 1.28
NUP88-204ENST00000572290 BCAS3Q9H6U6 928 aa23.07■■□□□ 1.28
NUP88-204ENST00000572290 UBIAD1Q9Y5Z9 338 aa23.07■■□□□ 1.28
NUP88-204ENST00000572290 LTBP2Q14767 1821 aa23.07■■□□□ 1.28
NUP88-204ENST00000572290 PPFIA3O75145 1194 aa23.06■■□□□ 1.28
NUP88-204ENST00000572290 F2P00734 622 aa23.06■■□□□ 1.28
NUP88-204ENST00000572290 ZNF286BP0CG31 522 aa23.06■■□□□ 1.28
NUP88-204ENST00000572290 ITGB5P18084 799 aa23.06■■□□□ 1.28
NUP88-204ENST00000572290 PSEN2P49810 448 aa23.06■■□□□ 1.28
NUP88-204ENST00000572290 AP3B2Q13367 1082 aa23.06■■□□□ 1.28
NUP88-204ENST00000572290 METTL7BQ6UX53 244 aa23.06■■□□□ 1.28
NUP88-204ENST00000572290 CYFIP1Q7L576 1253 aa23.06■■□□□ 1.28
NUP88-204ENST00000572290 PGBD1Q96JS3 809 aa23.06■■□□□ 1.28
NUP88-204ENST00000572290 ANO3Q9BYT9 981 aa23.06■■□□□ 1.28
NUP88-204ENST00000572290 TRIOBPQ9H2D6 2365 aa23.06■■□□□ 1.28
NUP88-204ENST00000572290 ESYT2A0FGR8 921 aa23.05■■□□□ 1.28
NUP88-204ENST00000572290 NOP56O00567 594 aaKnown RBP23.05■■□□□ 1.28
NUP88-204ENST00000572290 CYP2C9P11712 490 aa23.05■■□□□ 1.28
NUP88-204ENST00000572290 CSF2RAP15509 400 aa23.05■■□□□ 1.28
NUP88-204ENST00000572290 CLK2P49760 499 aaKnown RBP23.05■■□□□ 1.28
NUP88-204ENST00000572290 MFSD10Q14728 455 aa23.05■■□□□ 1.28
NUP88-204ENST00000572290 SESTD1Q86VW0 696 aa23.05■■□□□ 1.28
NUP88-204ENST00000572290 ALG1Q9BT22 464 aa23.05■■□□□ 1.28
NUP88-204ENST00000572290 C6orf50Q9HD87 102 aa23.05■■□□□ 1.28
NUP88-204ENST00000572290 TMEM260Q9NX78 707 aa23.05■■□□□ 1.28
NUP88-204ENST00000572290 NOD1Q9Y239 953 aa23.05■■□□□ 1.28
NUP88-204ENST00000572290 UMODL1Q5DID0 1318 aa23.05■■□□□ 1.28
NUP88-204ENST00000572290 HAS3O00219 553 aa23.04■■□□□ 1.28
NUP88-204ENST00000572290 CPLX1O14810 134 aa23.04■■□□□ 1.28
NUP88-204ENST00000572290 STK3Q13188 491 aa23.04■■□□□ 1.28
NUP88-204ENST00000572290 KIAA0753Q2KHM9 967 aa23.04■■□□□ 1.28
NUP88-204ENST00000572290 GIMAP8Q8ND71 665 aaPredicted RBP23.04■■□□□ 1.28
NUP88-204ENST00000572290 ZMYND12Q9H0C1 365 aa23.04■■□□□ 1.28
NUP88-204ENST00000572290 JADE2Q9NQC1 790 aa23.04■■□□□ 1.28
NUP88-204ENST00000572290 MAFGO15525 162 aa23.03■■□□□ 1.28
NUP88-204ENST00000572290 CCL23P55773 120 aa23.03■■□□□ 1.28
NUP88-204ENST00000572290 MTMR1Q13613 665 aa23.03■■□□□ 1.28
NUP88-204ENST00000572290 JAKMIP3Q5VZ66 844 aa23.03■■□□□ 1.28
NUP88-204ENST00000572290 CPLX2Q6PUV4 134 aaKnown RBP23.03■■□□□ 1.28
NUP88-204ENST00000572290 TRIM22Q8IYM9 498 aa23.03■■□□□ 1.28
NUP88-204ENST00000572290 C7orf31Q8N865 590 aa23.03■■□□□ 1.28
NUP88-204ENST00000572290 IL17RAQ96F46 866 aa23.03■■□□□ 1.28
NUP88-204ENST00000572290 RNPC3Q96LT9 517 aaKnown RBP23.03■■□□□ 1.28
NUP88-204ENST00000572290 GPR20Q99678 358 aa23.03■■□□□ 1.28
NUP88-204ENST00000572290 MXRA8Q9BRK3 442 aa23.03■■□□□ 1.28
NUP88-204ENST00000572290 ATP9AO75110 1047 aa23.02■■□□□ 1.28
NUP88-204ENST00000572290 SEC24BO95487 1268 aa23.02■■□□□ 1.28
NUP88-204ENST00000572290 KCNA2P16389 499 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms