RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 LRIT3Q3SXY7 679 aa16.71■□□□□ 0.27
LITAF-208ENST00000571627 CELF3Q5SZQ8 465 aaKnown RBP16.71■□□□□ 0.27
LITAF-208ENST00000571627 MYSM1Q5VVJ2 828 aa16.71■□□□□ 0.27
LITAF-208ENST00000571627 PCNX4Q63HM2 1172 aa16.71■□□□□ 0.27
LITAF-208ENST00000571627 MFSD5Q6N075 450 aa16.71■□□□□ 0.27
LITAF-208ENST00000571627 KCNV1Q6PIU1 500 aa16.71■□□□□ 0.27
LITAF-208ENST00000571627 PPTC7Q8NI37 304 aa16.71■□□□□ 0.27
LITAF-208ENST00000571627 HIPK3Q9H422 1215 aa16.71■□□□□ 0.27
LITAF-208ENST00000571627 NCOA5Q9HCD5 579 aaKnown RBP16.71■□□□□ 0.27
LITAF-208ENST00000571627 SCN5AQ14524 2016 aa16.7■□□□□ 0.26
LITAF-208ENST00000571627 CCDC196A0A1B0GTZ2 297 aa16.7■□□□□ 0.26
LITAF-208ENST00000571627 SPDYE3A6NKU9 549 aa16.7■□□□□ 0.26
LITAF-208ENST00000571627 CYP2C9P11712 490 aa16.7■□□□□ 0.26
LITAF-208ENST00000571627 CSF2RAP15509 400 aa16.7■□□□□ 0.26
LITAF-208ENST00000571627 PDIA3P30101 505 aaKnown RBP16.7■□□□□ 0.26
LITAF-208ENST00000571627 CCT2P78371 535 aaKnown RBP16.7■□□□□ 0.26
LITAF-208ENST00000571627 HSDL1Q3SXM5 330 aa16.7■□□□□ 0.26
LITAF-208ENST00000571627 GNPTABQ3T906 1256 aa16.7■□□□□ 0.26
LITAF-208ENST00000571627 PPP1R18Q6NYC8 613 aa16.7■□□□□ 0.26
LITAF-208ENST00000571627 KAT2BQ92831 832 aa16.7■□□□□ 0.26
LITAF-208ENST00000571627 PHKBQ93100 1093 aa16.7■□□□□ 0.26
LITAF-208ENST00000571627 PGBD1Q96JS3 809 aa16.7■□□□□ 0.26
LITAF-208ENST00000571627 SPATA33Q96N06 139 aa16.7■□□□□ 0.26
LITAF-208ENST00000571627 SEZ6LQ9BYH1 1024 aa16.7■□□□□ 0.26
LITAF-208ENST00000571627 BARHL2Q9NY43 387 aa16.7■□□□□ 0.26
LITAF-208ENST00000571627 PCDHA6Q9UN73 950 aa16.7■□□□□ 0.26
LITAF-208ENST00000571627 PCDHA8Q9Y5H6 950 aa16.7■□□□□ 0.26
LITAF-208ENST00000571627 TRIP12Q14669 1992 aaPredicted RBP16.69■□□□□ 0.26
LITAF-208ENST00000571627 TANC1Q9C0D5 1861 aa16.69■□□□□ 0.26
LITAF-208ENST00000571627 SPATA31C2B4DYI2 1134 aa16.69■□□□□ 0.26
LITAF-208ENST00000571627 STAM2O75886 525 aa16.69■□□□□ 0.26
LITAF-208ENST00000571627 TGFB3P10600 412 aa16.69■□□□□ 0.26
LITAF-208ENST00000571627 ICAM3P32942 547 aa16.69■□□□□ 0.26
LITAF-208ENST00000571627 ADCY7P51828 1080 aa16.69■□□□□ 0.26
LITAF-208ENST00000571627 PFKFB3Q16875 520 aaPredicted RBP16.69■□□□□ 0.26
LITAF-208ENST00000571627 NFRKBQ6P4R8 1299 aa16.69■□□□□ 0.26
LITAF-208ENST00000571627 NOC4LQ9BVI4 516 aaKnown RBP16.69■□□□□ 0.26
LITAF-208ENST00000571627 MLXIPQ9HAP2 919 aa16.69■□□□□ 0.26
LITAF-208ENST00000571627 RIC8AQ9NPQ8 531 aa16.69■□□□□ 0.26
LITAF-208ENST00000571627 TMEM260Q9NX78 707 aa16.69■□□□□ 0.26
LITAF-208ENST00000571627 TELO2Q9Y4R8 837 aa16.69■□□□□ 0.26
LITAF-208ENST00000571627 SMCO2A6NFE2 343 aa16.68■□□□□ 0.26
LITAF-208ENST00000571627 hCG_1984214I3L0E3 225 aa16.68■□□□□ 0.26
LITAF-208ENST00000571627 FIBPO43427 364 aa16.68■□□□□ 0.26
LITAF-208ENST00000571627 SCG2P13521 617 aa16.68■□□□□ 0.26
LITAF-208ENST00000571627 CCL23P55773 120 aa16.68■□□□□ 0.26
LITAF-208ENST00000571627 EVCP57679 992 aa16.68■□□□□ 0.26
LITAF-208ENST00000571627 NTRK3Q16288 839 aa16.68■□□□□ 0.26
LITAF-208ENST00000571627 PKN1Q16512 942 aa16.68■□□□□ 0.26
LITAF-208ENST00000571627 XRRA1Q6P2D8 792 aa16.68■□□□□ 0.26
LITAF-208ENST00000571627 CYFIP1Q7L576 1253 aa16.68■□□□□ 0.26
LITAF-208ENST00000571627 ZNF713Q8N859 430 aaPredicted RBP16.68■□□□□ 0.26
LITAF-208ENST00000571627 ALG1Q9BT22 464 aa16.68■□□□□ 0.26
LITAF-208ENST00000571627 WNT8AQ9H1J5 351 aa16.68■□□□□ 0.26
LITAF-208ENST00000571627 ADAMTS3O15072 1205 aa16.67■□□□□ 0.26
LITAF-208ENST00000571627 F2P00734 622 aa16.67■□□□□ 0.26
LITAF-208ENST00000571627 ACRP10323 421 aa16.67■□□□□ 0.26
LITAF-208ENST00000571627 HOXD8P13378 290 aaPredicted RBP16.67■□□□□ 0.26
LITAF-208ENST00000571627 ITGB5P18084 799 aa16.67■□□□□ 0.26
LITAF-208ENST00000571627 PSEN2P49810 448 aa16.67■□□□□ 0.26
LITAF-208ENST00000571627 SP4Q02446 784 aa16.67■□□□□ 0.26
LITAF-208ENST00000571627 STK3Q13188 491 aa16.67■□□□□ 0.26
LITAF-208ENST00000571627 MFSD10Q14728 455 aa16.67■□□□□ 0.26
LITAF-208ENST00000571627 C16orf59Q7L2K0 433 aa16.67■□□□□ 0.26
LITAF-208ENST00000571627 TMEM199Q8N511 208 aa16.67■□□□□ 0.26
LITAF-208ENST00000571627 RNPC3Q96LT9 517 aaKnown RBP16.67■□□□□ 0.26
LITAF-208ENST00000571627 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.67■□□□□ 0.26
LITAF-208ENST00000571627 SLC26A6Q9BXS9 759 aa16.67■□□□□ 0.26
LITAF-208ENST00000571627 ANO3Q9BYT9 981 aa16.67■□□□□ 0.26
LITAF-208ENST00000571627 PDRG1Q9NUG6 133 aa16.67■□□□□ 0.26
LITAF-208ENST00000571627 PKD2L1Q9P0L9 805 aa16.67■□□□□ 0.26
LITAF-208ENST00000571627 PRPF3O43395 683 aaKnown RBP16.66■□□□□ 0.26
LITAF-208ENST00000571627 SEC24BO95487 1268 aa16.66■□□□□ 0.26
LITAF-208ENST00000571627 SUPT20HL2P0C7V6 817 aa16.66■□□□□ 0.26
LITAF-208ENST00000571627 PTPN11Q06124 597 aaPredicted RBP16.66■□□□□ 0.26
LITAF-208ENST00000571627 PPIGQ13427 754 aaKnown RBP eCLIP16.66■□□□□ 0.26
LITAF-208ENST00000571627 NEDD9Q14511 834 aa16.66■□□□□ 0.26
LITAF-208ENST00000571627 KIAA0753Q2KHM9 967 aa16.66■□□□□ 0.26
LITAF-208ENST00000571627 GDF6Q6KF10 455 aaPredicted RBP16.66■□□□□ 0.26
LITAF-208ENST00000571627 Q7L0L9 218 aa16.66■□□□□ 0.26
LITAF-208ENST00000571627 NLRX1Q86UT6 975 aa16.66■□□□□ 0.26
LITAF-208ENST00000571627 IL17RAQ96F46 866 aa16.66■□□□□ 0.26
LITAF-208ENST00000571627 SCLYQ96I15 445 aa16.66■□□□□ 0.26
LITAF-208ENST00000571627 UBIAD1Q9Y5Z9 338 aa16.66■□□□□ 0.26
LITAF-208ENST00000571627 HAS3O00219 553 aa16.65■□□□□ 0.26
LITAF-208ENST00000571627 NOP56O00567 594 aaKnown RBP16.65■□□□□ 0.26
LITAF-208ENST00000571627 ATP9AO75110 1047 aa16.65■□□□□ 0.26
LITAF-208ENST00000571627 PPFIA4O75335 1185 aa16.65■□□□□ 0.26
LITAF-208ENST00000571627 IFNAR1P17181 557 aa16.65■□□□□ 0.26
LITAF-208ENST00000571627 CLK2P49760 499 aaKnown RBP16.65■□□□□ 0.26
LITAF-208ENST00000571627 AKAP17AQ02040 695 aaKnown RBP16.65■□□□□ 0.26
LITAF-208ENST00000571627 MTMR1Q13613 665 aa16.65■□□□□ 0.26
LITAF-208ENST00000571627 PTGISQ16647 500 aa16.65■□□□□ 0.26
LITAF-208ENST00000571627 C8orf34Q49A92 452 aa16.65■□□□□ 0.26
LITAF-208ENST00000571627 TMEM240Q5SV17 173 aa16.65■□□□□ 0.26
LITAF-208ENST00000571627 JAKMIP3Q5VZ66 844 aa16.65■□□□□ 0.26
LITAF-208ENST00000571627 METTL7BQ6UX53 244 aa16.65■□□□□ 0.26
LITAF-208ENST00000571627 GPRASP2Q96D09 838 aa16.65■□□□□ 0.26
LITAF-208ENST00000571627 C16orf70Q9BSU1 422 aa16.65■□□□□ 0.26
LITAF-208ENST00000571627 KATNAL1Q9BW62 490 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms