RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 TTC41PQ6P2S7 1318 aa13.29□□□□□ -0.28
CHMP6-202ENST00000571457 USP34Q70CQ2 3546 aa13.29□□□□□ -0.28
CHMP6-202ENST00000571457 C5orf42Q9H799 3197 aa13.28□□□□□ -0.28
CHMP6-202ENST00000571457 TECTAO75443 2155 aa13.28□□□□□ -0.28
CHMP6-202ENST00000571457 RIF1Q5UIP0 2472 aaKnown RBP13.28□□□□□ -0.28
CHMP6-202ENST00000571457 PPFIA4O75335 1185 aa13.28□□□□□ -0.28
CHMP6-202ENST00000571457 EIF3JO75822 258 aaKnown RBP13.28□□□□□ -0.28
CHMP6-202ENST00000571457 ZNF286BP0CG31 522 aa13.28□□□□□ -0.28
CHMP6-202ENST00000571457 IRS1P35568 1242 aa13.28□□□□□ -0.28
CHMP6-202ENST00000571457 THPOP40225 353 aa13.28□□□□□ -0.28
CHMP6-202ENST00000571457 MKRN4PQ13434 485 aaPredicted RBP13.28□□□□□ -0.28
CHMP6-202ENST00000571457 SMAD2Q15796 467 aaKnown RBP13.28□□□□□ -0.28
CHMP6-202ENST00000571457 PLEKHG4Q58EX7 1191 aa13.28□□□□□ -0.28
CHMP6-202ENST00000571457 SERINC5Q86VE9 423 aa13.28□□□□□ -0.28
CHMP6-202ENST00000571457 SEPT8Q92599 483 aa13.28□□□□□ -0.28
CHMP6-202ENST00000571457 TOP1MTQ969P6 601 aa13.28□□□□□ -0.28
CHMP6-202ENST00000571457 TTC14Q96N46 770 aa13.28□□□□□ -0.28
CHMP6-202ENST00000571457 RMDN3Q96TC7 470 aa13.28□□□□□ -0.28
CHMP6-202ENST00000571457 MRVI1Q9Y6F6 885 aa13.28□□□□□ -0.28
CHMP6-202ENST00000571457 KIAA1217Q5T5P2 1943 aa13.27□□□□□ -0.28
CHMP6-202ENST00000571457 ST18O60284 1047 aa13.27□□□□□ -0.29
CHMP6-202ENST00000571457 SNHG28P0DPA3 235 aa13.27□□□□□ -0.29
CHMP6-202ENST00000571457 PTPN5P54829 565 aa13.27□□□□□ -0.29
CHMP6-202ENST00000571457 ALX1Q15699 326 aa13.27□□□□□ -0.29
CHMP6-202ENST00000571457 RRP12Q5JTH9 1297 aaKnown RBP13.27□□□□□ -0.29
CHMP6-202ENST00000571457 ARHGEF16Q5VV41 709 aa13.27□□□□□ -0.29
CHMP6-202ENST00000571457 RPAINQ86UA6 219 aa13.27□□□□□ -0.29
CHMP6-202ENST00000571457 SYTL5Q8TDW5 730 aaPredicted RBP13.27□□□□□ -0.29
CHMP6-202ENST00000571457 WNT8BQ93098 351 aa13.27□□□□□ -0.29
CHMP6-202ENST00000571457 TAAR1Q96RJ0 339 aa13.27□□□□□ -0.29
CHMP6-202ENST00000571457 DCTPP1Q9H773 170 aa13.27□□□□□ -0.29
CHMP6-202ENST00000571457 ABCB11O95342 1321 aa13.27□□□□□ -0.29
CHMP6-202ENST00000571457 COL4A6Q14031 1691 aa13.27□□□□□ -0.29
CHMP6-202ENST00000571457 CFAP54Q96N23 3096 aa13.26□□□□□ -0.29
CHMP6-202ENST00000571457 CACNA1AO00555 2505 aa13.26□□□□□ -0.29
CHMP6-202ENST00000571457 FOXP2O15409 715 aa13.26□□□□□ -0.29
CHMP6-202ENST00000571457 CAND2O75155 1236 aa13.26□□□□□ -0.29
CHMP6-202ENST00000571457 UPP2O95045 317 aa13.26□□□□□ -0.29
CHMP6-202ENST00000571457 RB1P06400 928 aa13.26□□□□□ -0.29
CHMP6-202ENST00000571457 HOXD8P13378 290 aaPredicted RBP13.26□□□□□ -0.29
CHMP6-202ENST00000571457 ZNF200P98182 395 aaPredicted RBP13.26□□□□□ -0.29
CHMP6-202ENST00000571457 CTC1Q2NKJ3 1217 aa13.26□□□□□ -0.29
CHMP6-202ENST00000571457 KCNV1Q6PIU1 500 aa13.26□□□□□ -0.29
CHMP6-202ENST00000571457 BMP8AQ7Z5Y6 402 aa13.26□□□□□ -0.29
CHMP6-202ENST00000571457 EDAQ92838 391 aa13.26□□□□□ -0.29
CHMP6-202ENST00000571457 C11orf84Q9BUA3 381 aaPredicted RBP13.26□□□□□ -0.29
CHMP6-202ENST00000571457 IFIH1Q9BYX4 1025 aaKnown RBP13.26□□□□□ -0.29
CHMP6-202ENST00000571457 LMAN2LQ9H0V9 348 aa13.26□□□□□ -0.29
CHMP6-202ENST00000571457 MUTYHQ9UIF7 546 aa13.26□□□□□ -0.29
CHMP6-202ENST00000571457 RWDD3Q9Y3V2 267 aa13.26□□□□□ -0.29
CHMP6-202ENST00000571457 C17orf102A2RUQ5 167 aa13.25□□□□□ -0.29
CHMP6-202ENST00000571457 NR3C2P08235 984 aa13.25□□□□□ -0.29
CHMP6-202ENST00000571457 PCP11498 1178 aaKnown RBP13.25□□□□□ -0.29
CHMP6-202ENST00000571457 LTBRP36941 435 aa13.25□□□□□ -0.29
CHMP6-202ENST00000571457 SMAD4Q13485 552 aaKnown RBP13.25□□□□□ -0.29
CHMP6-202ENST00000571457 RNF135Q8IUD6 432 aa13.25□□□□□ -0.29
CHMP6-202ENST00000571457 FIBCD1Q8N539 461 aa13.25□□□□□ -0.29
CHMP6-202ENST00000571457 PI4K2BQ8TCG2 481 aa13.25□□□□□ -0.29
CHMP6-202ENST00000571457 APBB2Q92870 758 aa13.25□□□□□ -0.29
CHMP6-202ENST00000571457 ATP6V0A1Q93050 837 aa13.25□□□□□ -0.29
CHMP6-202ENST00000571457 IL17RAQ96F46 866 aa13.25□□□□□ -0.29
CHMP6-202ENST00000571457 MRPL11Q9Y3B7 192 aaKnown RBP13.25□□□□□ -0.29
CHMP6-202ENST00000571457 C5orf67F2Z3F1 127 aa13.24□□□□□ -0.29
CHMP6-202ENST00000571457 STXBP3O00186 592 aa13.24□□□□□ -0.29
CHMP6-202ENST00000571457 MBTPS2O43462 519 aa13.24□□□□□ -0.29
CHMP6-202ENST00000571457 HSPD1P10809 573 aaKnown RBP13.24□□□□□ -0.29
CHMP6-202ENST00000571457 EIF2AK2P19525 551 aaKnown RBP13.24□□□□□ -0.29
CHMP6-202ENST00000571457 CTNNB1P35222 781 aa13.24□□□□□ -0.29
CHMP6-202ENST00000571457 CLUL1Q15846 466 aa13.24□□□□□ -0.29
CHMP6-202ENST00000571457 CDC37Q16543 378 aaPredicted RBP13.24□□□□□ -0.29
CHMP6-202ENST00000571457 VPS53Q5VIR6 699 aa13.24□□□□□ -0.29
CHMP6-202ENST00000571457 MYSM1Q5VVJ2 828 aa13.24□□□□□ -0.29
CHMP6-202ENST00000571457 SUGP1Q8IWZ8 645 aaKnown RBP13.24□□□□□ -0.29
CHMP6-202ENST00000571457 MIER1Q8N108 512 aa13.24□□□□□ -0.29
CHMP6-202ENST00000571457 TBC1D5Q92609 795 aa13.24□□□□□ -0.29
CHMP6-202ENST00000571457 PPP2R3CQ969Q6 453 aa13.24□□□□□ -0.29
CHMP6-202ENST00000571457 PBXIP1Q96AQ6 731 aa13.24□□□□□ -0.29
CHMP6-202ENST00000571457 SPATA33Q96N06 139 aa13.24□□□□□ -0.29
CHMP6-202ENST00000571457 COL20A1Q9P218 1284 aa13.24□□□□□ -0.29
CHMP6-202ENST00000571457 RALGAPA2Q2PPJ7 1873 aa13.24□□□□□ -0.29
CHMP6-202ENST00000571457 NLRC5Q86WI3 1866 aa13.24□□□□□ -0.29
CHMP6-202ENST00000571457 MYH7BA7E2Y1 1941 aa13.23□□□□□ -0.29
CHMP6-202ENST00000571457 FGAP02671 866 aa13.23□□□□□ -0.29
CHMP6-202ENST00000571457 TGFB3P10600 412 aa13.23□□□□□ -0.29
CHMP6-202ENST00000571457 GNAT1P11488 350 aa13.23□□□□□ -0.29
CHMP6-202ENST00000571457 FOXK2Q01167 660 aa13.23□□□□□ -0.29
CHMP6-202ENST00000571457 HYAL1Q12794 435 aa13.23□□□□□ -0.29
CHMP6-202ENST00000571457 CELF3Q5SZQ8 465 aaKnown RBP13.23□□□□□ -0.29
CHMP6-202ENST00000571457 MFSD6Q6ZSS7 791 aa13.23□□□□□ -0.29
CHMP6-202ENST00000571457 TRIM67Q6ZTA4 783 aa13.23□□□□□ -0.29
CHMP6-202ENST00000571457 PRSS33Q8NF86 280 aa13.23□□□□□ -0.29
CHMP6-202ENST00000571457 ANKS1AQ92625 1134 aa13.23□□□□□ -0.29
CHMP6-202ENST00000571457 UBA5Q9GZZ9 404 aa13.23□□□□□ -0.29
CHMP6-202ENST00000571457 IRF2BPLQ9H1B7 796 aa13.23□□□□□ -0.29
CHMP6-202ENST00000571457 PXMP2Q9NR77 195 aa13.23□□□□□ -0.29
CHMP6-202ENST00000571457 HELLSQ9NRZ9 838 aa13.23□□□□□ -0.29
CHMP6-202ENST00000571457 CD207Q9UJ71 328 aa13.23□□□□□ -0.29
CHMP6-202ENST00000571457 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.22□□□□□ -0.29
CHMP6-202ENST00000571457 TMEM221A6NGB7 291 aa13.22□□□□□ -0.29
CHMP6-202ENST00000571457 H3BRB1 525 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms