RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 HEATR3Q7Z4Q2 680 aa34.91■■■■□ 3.18
CTDNEP1-206ENST00000571409 SESTD1Q86VW0 696 aa34.91■■■■□ 3.18
CTDNEP1-206ENST00000571409 JAKMIP1Q96N16 626 aaKnown RBP34.91■■■■□ 3.18
CTDNEP1-206ENST00000571409 GUCD1Q96NT3 240 aa34.91■■■■□ 3.18
CTDNEP1-206ENST00000571409 MLXIPQ9HAP2 919 aa34.91■■■■□ 3.18
CTDNEP1-206ENST00000571409 STXBP5LQ9Y2K9 1186 aa34.91■■■■□ 3.18
CTDNEP1-206ENST00000571409 SNX14Q9Y5W7 946 aa34.91■■■■□ 3.18
CTDNEP1-206ENST00000571409 GOLGA8AA7E2F4 631 aa34.9■■■■□ 3.18
CTDNEP1-206ENST00000571409 GOLGA8BA8MQT2 603 aa34.9■■■■□ 3.18
CTDNEP1-206ENST00000571409 REC8O95072 547 aa34.9■■■■□ 3.18
CTDNEP1-206ENST00000571409 F2P00734 622 aa34.9■■■■□ 3.18
CTDNEP1-206ENST00000571409 HOXD8P13378 290 aaPredicted RBP34.9■■■■□ 3.18
CTDNEP1-206ENST00000571409 ICAM3P32942 547 aa34.9■■■■□ 3.18
CTDNEP1-206ENST00000571409 PSEN2P49810 448 aa34.9■■■■□ 3.18
CTDNEP1-206ENST00000571409 FGD1P98174 961 aa34.9■■■■□ 3.18
CTDNEP1-206ENST00000571409 PTGISQ16647 500 aa34.9■■■■□ 3.18
CTDNEP1-206ENST00000571409 PCNX4Q63HM2 1172 aa34.9■■■■□ 3.18
CTDNEP1-206ENST00000571409 RPUSD2Q8IZ73 545 aaKnown RBP34.9■■■■□ 3.18
CTDNEP1-206ENST00000571409 HERVK_113Q902F9 699 aa34.9■■■■□ 3.18
CTDNEP1-206ENST00000571409 ALG1Q9BT22 464 aa34.9■■■■□ 3.18
CTDNEP1-206ENST00000571409 PPFIA4O75335 1185 aa34.89■■■■□ 3.18
CTDNEP1-206ENST00000571409 GDF6Q6KF10 455 aaPredicted RBP34.89■■■■□ 3.18
CTDNEP1-206ENST00000571409 SEMA6BQ9H3T3 888 aa34.89■■■■□ 3.18
CTDNEP1-206ENST00000571409 FIBPO43427 364 aa34.88■■■■□ 3.17
CTDNEP1-206ENST00000571409 MFSD10Q14728 455 aa34.88■■■■□ 3.17
CTDNEP1-206ENST00000571409 UBE2SQ16763 222 aa34.88■■■■□ 3.17
CTDNEP1-206ENST00000571409 XRRA1Q6P2D8 792 aa34.88■■■■□ 3.17
CTDNEP1-206ENST00000571409 OTOP2Q7RTS6 562 aa34.88■■■■□ 3.17
CTDNEP1-206ENST00000571409 C7orf31Q8N865 590 aa34.88■■■■□ 3.17
CTDNEP1-206ENST00000571409 MTIF3Q9H2K0 278 aaKnown RBP34.88■■■■□ 3.17
CTDNEP1-206ENST00000571409 TTYH1Q9H313 450 aaPredicted RBP34.88■■■■□ 3.17
CTDNEP1-206ENST00000571409 BCAS3Q9H6U6 928 aa34.88■■■■□ 3.17
CTDNEP1-206ENST00000571409 HDAC6Q9UBN7 1215 aa34.88■■■■□ 3.17
CTDNEP1-206ENST00000571409 NAP1L2Q9ULW6 460 aaPredicted RBP34.88■■■■□ 3.17
CTDNEP1-206ENST00000571409 SPATA31C2B4DYI2 1134 aa34.87■■■■□ 3.17
CTDNEP1-206ENST00000571409 HAS3O00219 553 aa34.87■■■■□ 3.17
CTDNEP1-206ENST00000571409 PITPNM1O00562 1244 aa34.87■■■■□ 3.17
CTDNEP1-206ENST00000571409 FUT2Q10981 343 aa34.87■■■■□ 3.17
CTDNEP1-206ENST00000571409 SEMA3FQ13275 785 aa34.87■■■■□ 3.17
CTDNEP1-206ENST00000571409 KIAA0753Q2KHM9 967 aa34.87■■■■□ 3.17
CTDNEP1-206ENST00000571409 WWC2Q6AWC2 1192 aa34.87■■■■□ 3.17
CTDNEP1-206ENST00000571409 BLOC1S2Q6QNY1 142 aa34.87■■■■□ 3.17
CTDNEP1-206ENST00000571409 CXXC1Q9P0U4 656 aaPredicted RBP34.87■■■■□ 3.17
CTDNEP1-206ENST00000571409 GTF2IRD1Q9UHL9 959 aa34.87■■■■□ 3.17
CTDNEP1-206ENST00000571409 TANC1Q9C0D5 1861 aa34.86■■■■□ 3.17
CTDNEP1-206ENST00000571409 DNAJB2P25686 324 aa34.86■■■■□ 3.17
CTDNEP1-206ENST00000571409 RCAN1P53805 252 aa34.86■■■■□ 3.17
CTDNEP1-206ENST00000571409 BFSP2Q13515 415 aa34.86■■■■□ 3.17
CTDNEP1-206ENST00000571409 Q6ZUG5 572 aa34.86■■■■□ 3.17
CTDNEP1-206ENST00000571409 RETREG2Q8NC44 543 aa34.86■■■■□ 3.17
CTDNEP1-206ENST00000571409 VWCEQ96DN2 955 aa34.86■■■■□ 3.17
CTDNEP1-206ENST00000571409 SCN5AQ14524 2016 aa34.86■■■■□ 3.17
CTDNEP1-206ENST00000571409 GRXCR1A8MXD5 290 aa34.85■■■■□ 3.17
CTDNEP1-206ENST00000571409 CDC27P30260 824 aa34.85■■■■□ 3.17
CTDNEP1-206ENST00000571409 NEDD9Q14511 834 aa34.85■■■■□ 3.17
CTDNEP1-206ENST00000571409 DEFB128Q7Z7B8 93 aa34.85■■■■□ 3.17
CTDNEP1-206ENST00000571409 CTAGE1Q96RT6 745 aa34.85■■■■□ 3.17
CTDNEP1-206ENST00000571409 DOCK5Q9H7D0 1870 aa34.85■■■■□ 3.17
CTDNEP1-206ENST00000571409 FAM217BQ9NTX9 383 aaPredicted RBP34.85■■■■□ 3.17
CTDNEP1-206ENST00000571409 TMEM265A0A087WTH1 108 aa34.84■■■■□ 3.17
CTDNEP1-206ENST00000571409 SPDYE3A6NKU9 549 aa34.84■■■■□ 3.17
CTDNEP1-206ENST00000571409 APOBRQ0VD83 1088 aa34.84■■■■□ 3.17
CTDNEP1-206ENST00000571409 CYFIP1Q7L576 1253 aa34.84■■■■□ 3.17
CTDNEP1-206ENST00000571409 NLRX1Q86UT6 975 aa34.84■■■■□ 3.17
CTDNEP1-206ENST00000571409 V9GY48 417 aaPredicted RBP34.84■■■■□ 3.17
CTDNEP1-206ENST00000571409 NOP56O00567 594 aaKnown RBP34.83■■■■□ 3.17
CTDNEP1-206ENST00000571409 PFKMP08237 780 aa34.83■■■■□ 3.17
CTDNEP1-206ENST00000571409 IQCF3P0C7M6 154 aa34.83■■■■□ 3.17
CTDNEP1-206ENST00000571409 NAPAP54920 295 aa34.83■■■■□ 3.17
CTDNEP1-206ENST00000571409 METTL7BQ6UX53 244 aa34.83■■■■□ 3.17
CTDNEP1-206ENST00000571409 CCDC155Q8N6L0 562 aa34.83■■■■□ 3.17
CTDNEP1-206ENST00000571409 BRF1Q92994 677 aa34.83■■■■□ 3.17
CTDNEP1-206ENST00000571409 C16orf70Q9BSU1 422 aa34.83■■■■□ 3.17
CTDNEP1-206ENST00000571409 RFC2P35250 354 aa34.82■■■■□ 3.16
CTDNEP1-206ENST00000571409 METAP2P50579 478 aaKnown RBP eCLIP34.82■■■■□ 3.16
CTDNEP1-206ENST00000571409 TYW1BQ6NUM6 668 aa34.82■■■■□ 3.16
CTDNEP1-206ENST00000571409 CAGE1Q8TC20 777 aa34.82■■■■□ 3.16
CTDNEP1-206ENST00000571409 CDX2Q99626 313 aaPredicted RBP34.82■■■■□ 3.16
CTDNEP1-206ENST00000571409 PBX4Q9BYU1 374 aa34.82■■■■□ 3.16
CTDNEP1-206ENST00000571409 PPP4R2Q9NY27 417 aa34.82■■■■□ 3.16
CTDNEP1-206ENST00000571409 PCDHA6Q9UN73 950 aa34.82■■■■□ 3.16
CTDNEP1-206ENST00000571409 PCDHA8Q9Y5H6 950 aa34.82■■■■□ 3.16
CTDNEP1-206ENST00000571409 COL6A3P12111 3177 aa34.81■■■■□ 3.16
CTDNEP1-206ENST00000571409 RPS6KB1P23443 525 aa34.81■■■■□ 3.16
CTDNEP1-206ENST00000571409 PPP1R18Q6NYC8 613 aa34.81■■■■□ 3.16
CTDNEP1-206ENST00000571409 LGALS2P05162 132 aa34.8■■■■□ 3.16
CTDNEP1-206ENST00000571409 PSMA5P28066 241 aa34.8■■■■□ 3.16
CTDNEP1-206ENST00000571409 ADD1P35611 737 aaKnown RBP34.8■■■■□ 3.16
CTDNEP1-206ENST00000571409 PBX2P40425 430 aa34.8■■■■□ 3.16
CTDNEP1-206ENST00000571409 DHX38Q92620 1227 aaKnown RBP34.8■■■■□ 3.16
CTDNEP1-206ENST00000571409 TIFAQ96CG3 184 aa34.8■■■■□ 3.16
CTDNEP1-206ENST00000571409 SENP7Q9BQF6 1050 aa34.8■■■■□ 3.16
CTDNEP1-206ENST00000571409 ZBBXA8MT70 800 aa34.79■■■■□ 3.16
CTDNEP1-206ENST00000571409 hCG_1984214I3L0E3 225 aa34.79■■■■□ 3.16
CTDNEP1-206ENST00000571409 ZNF713Q8N859 430 aaPredicted RBP34.79■■■■□ 3.16
CTDNEP1-206ENST00000571409 AFAP1L1Q8TED9 768 aa34.79■■■■□ 3.16
CTDNEP1-206ENST00000571409 GPRASP2Q96D09 838 aa34.79■■■■□ 3.16
CTDNEP1-206ENST00000571409 GPR20Q99678 358 aa34.79■■■■□ 3.16
CTDNEP1-206ENST00000571409 EHMT1Q9H9B1 1298 aa34.79■■■■□ 3.16
CTDNEP1-206ENST00000571409 RIC8AQ9NPQ8 531 aa34.79■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms