RNA–Protein interactions for RNA: ENST00000571186.5

CIITA-205, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 1,041 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-205ENST00000571186 B4E1Z4 1266 aa16.67■□□□□ 0.26
CIITA-205ENST00000571186 RBAK-RBAKDNI3L0D1 243 aa16.67■□□□□ 0.26
CIITA-205ENST00000571186 EFCAB14O75071 495 aa16.67■□□□□ 0.26
CIITA-205ENST00000571186 ZNF286BP0CG31 522 aa16.67■□□□□ 0.26
CIITA-205ENST00000571186 ERVK-21P61565 698 aa16.67■□□□□ 0.26
CIITA-205ENST00000571186 ZNF200P98182 395 aaPredicted RBP16.67■□□□□ 0.26
CIITA-205ENST00000571186 ASPRV1Q53RT3 343 aa16.67■□□□□ 0.26
CIITA-205ENST00000571186 ZNF618Q5T7W0 954 aa16.67■□□□□ 0.26
CIITA-205ENST00000571186 CCDC136Q96JN2 1154 aa16.67■□□□□ 0.26
CIITA-205ENST00000571186 JMJD4Q9H9V9 463 aa16.67■□□□□ 0.26
CIITA-205ENST00000571186 PXMP2Q9NR77 195 aa16.67■□□□□ 0.26
CIITA-205ENST00000571186 HCN4Q9Y3Q4 1203 aa16.67■□□□□ 0.26
CIITA-205ENST00000571186 MYO7AQ13402 2215 aa16.67■□□□□ 0.26
CIITA-205ENST00000571186 LAMA4Q16363 1823 aa16.67■□□□□ 0.26
CIITA-205ENST00000571186 LINC01553A4QN01 128 aa16.66■□□□□ 0.26
CIITA-205ENST00000571186 SORBS3O60504 671 aa16.66■□□□□ 0.26
CIITA-205ENST00000571186 NEFLP07196 543 aa16.66■□□□□ 0.26
CIITA-205ENST00000571186 PARP1P09874 1014 aaKnown RBP16.66■□□□□ 0.26
CIITA-205ENST00000571186 MYCLP12524 364 aaPredicted RBP16.66■□□□□ 0.26
CIITA-205ENST00000571186 PPTC7Q8NI37 304 aa16.66■□□□□ 0.26
CIITA-205ENST00000571186 ANKS1AQ92625 1134 aa16.66■□□□□ 0.26
CIITA-205ENST00000571186 KHSRPQ92945 711 aaKnown RBP eCLIP16.66■□□□□ 0.26
CIITA-205ENST00000571186 EMID1Q96A84 441 aaPredicted RBP16.66■□□□□ 0.26
CIITA-205ENST00000571186 ZSCAN10Q96SZ4 725 aaPredicted RBP16.66■□□□□ 0.26
CIITA-205ENST00000571186 HAS3O00219 553 aa16.65■□□□□ 0.26
CIITA-205ENST00000571186 F2P00734 622 aa16.65■□□□□ 0.26
CIITA-205ENST00000571186 TRIM71Q2Q1W2 868 aaKnown RBP16.65■□□□□ 0.26
CIITA-205ENST00000571186 ENAHQ8N8S7 591 aaPredicted RBP16.65■□□□□ 0.26
CIITA-205ENST00000571186 WNT8BQ93098 351 aa16.65■□□□□ 0.26
CIITA-205ENST00000571186 UBE2ZQ9H832 354 aaPredicted RBP16.65■□□□□ 0.26
CIITA-205ENST00000571186 ZSWIM5Q9P217 1185 aa16.65■□□□□ 0.26
CIITA-205ENST00000571186 INSL6Q9Y581 213 aa16.65■□□□□ 0.26
CIITA-205ENST00000571186 MUC6Q6W4X9 2439 aa16.64■□□□□ 0.25
CIITA-205ENST00000571186 FAM86C2PA6NEL3 165 aa16.64■□□□□ 0.25
CIITA-205ENST00000571186 HIP1O00291 1037 aa16.64■□□□□ 0.25
CIITA-205ENST00000571186 PPFIA4O75335 1185 aa16.64■□□□□ 0.25
CIITA-205ENST00000571186 LGR5O75473 907 aa16.64■□□□□ 0.25
CIITA-205ENST00000571186 CENPBP07199 599 aaPredicted RBP16.64■□□□□ 0.25
CIITA-205ENST00000571186 NT5C2P49902 561 aa16.64■□□□□ 0.25
CIITA-205ENST00000571186 MBTPS1Q14703 1052 aa16.64■□□□□ 0.25
CIITA-205ENST00000571186 TRAF7Q6Q0C0 670 aa16.64■□□□□ 0.25
CIITA-205ENST00000571186 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.64■□□□□ 0.25
CIITA-205ENST00000571186 SPATA33Q96N06 139 aa16.64■□□□□ 0.25
CIITA-205ENST00000571186 AMNQ9BXJ7 453 aa16.64■□□□□ 0.25
CIITA-205ENST00000571186 CD320Q9NPF0 282 aa16.64■□□□□ 0.25
CIITA-205ENST00000571186 DOCK5Q9H7D0 1870 aa16.63■□□□□ 0.25
CIITA-205ENST00000571186 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.63■□□□□ 0.25
CIITA-205ENST00000571186 GPR37L1O60883 481 aa16.63■□□□□ 0.25
CIITA-205ENST00000571186 KCNA5P22460 613 aa16.63■□□□□ 0.25
CIITA-205ENST00000571186 CHMLP26374 656 aa16.63■□□□□ 0.25
CIITA-205ENST00000571186 THPOP40225 353 aa16.63■□□□□ 0.25
CIITA-205ENST00000571186 HSD17B4P51659 736 aa16.63■□□□□ 0.25
CIITA-205ENST00000571186 HIC1Q14526 733 aa16.63■□□□□ 0.25
CIITA-205ENST00000571186 CELF3Q5SZQ8 465 aaKnown RBP16.63■□□□□ 0.25
CIITA-205ENST00000571186 MYSM1Q5VVJ2 828 aa16.63■□□□□ 0.25
CIITA-205ENST00000571186 KCNV1Q6PIU1 500 aa16.63■□□□□ 0.25
CIITA-205ENST00000571186 MYOCDQ8IZQ8 938 aa16.63■□□□□ 0.25
CIITA-205ENST00000571186 STAG2Q8N3U4 1231 aa16.63■□□□□ 0.25
CIITA-205ENST00000571186 FBXO22Q8NEZ5 403 aa16.63■□□□□ 0.25
CIITA-205ENST00000571186 DBF4BQ8NFT6 615 aa16.63■□□□□ 0.25
CIITA-205ENST00000571186 C17orf80Q9BSJ5 609 aa16.63■□□□□ 0.25
CIITA-205ENST00000571186 ARIH1Q9Y4X5 557 aaPredicted RBP16.63■□□□□ 0.25
CIITA-205ENST00000571186 NLRC5Q86WI3 1866 aa16.63■□□□□ 0.25
CIITA-205ENST00000571186 RSPH10B2B2RC85 870 aa16.62■□□□□ 0.25
CIITA-205ENST00000571186 PI4K2BG5E9Z4 385 aa16.62■□□□□ 0.25
CIITA-205ENST00000571186 OPLAHO14841 1288 aa16.62■□□□□ 0.25
CIITA-205ENST00000571186 GGPS1O95749 300 aa16.62■□□□□ 0.25
CIITA-205ENST00000571186 AMHP03971 560 aa16.62■□□□□ 0.25
CIITA-205ENST00000571186 RSPH10BP0C881 870 aa16.62■□□□□ 0.25
CIITA-205ENST00000571186 HOXD11P31277 338 aaPredicted RBP16.62■□□□□ 0.25
CIITA-205ENST00000571186 HSDL1Q3SXM5 330 aa16.62■□□□□ 0.25
CIITA-205ENST00000571186 ZFP91Q96JP5 570 aaPredicted RBP16.62■□□□□ 0.25
CIITA-205ENST00000571186 PDCD2LQ9BRP1 358 aa16.62■□□□□ 0.25
CIITA-205ENST00000571186 UBAC1Q9BSL1 405 aa16.62■□□□□ 0.25
CIITA-205ENST00000571186 KRT23Q9C075 422 aa16.62■□□□□ 0.25
CIITA-205ENST00000571186 EMSYQ7Z589 1322 aa16.62■□□□□ 0.25
CIITA-205ENST00000571186 KLRF2D3W0D1 207 aa16.61■□□□□ 0.25
CIITA-205ENST00000571186 RGS20O76081 388 aa16.61■□□□□ 0.25
CIITA-205ENST00000571186 HOXD8P13378 290 aaPredicted RBP16.61■□□□□ 0.25
CIITA-205ENST00000571186 HOXA13P31271 388 aaPredicted RBP16.61■□□□□ 0.25
CIITA-205ENST00000571186 SP2Q02086 613 aa16.61■□□□□ 0.25
CIITA-205ENST00000571186 IMMTQ16891 758 aaKnown RBP16.61■□□□□ 0.25
CIITA-205ENST00000571186 LEXMQ3ZCV2 418 aa16.61■□□□□ 0.25
CIITA-205ENST00000571186 IFIT1BQ5T764 474 aaKnown RBP16.61■□□□□ 0.25
CIITA-205ENST00000571186 STOX1Q6ZVD7 989 aa16.61■□□□□ 0.25
CIITA-205ENST00000571186 SERINC5Q86VE9 423 aa16.61■□□□□ 0.25
CIITA-205ENST00000571186 VSIG10LQ86VR7 867 aa16.61■□□□□ 0.25
CIITA-205ENST00000571186 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.61■□□□□ 0.25
CIITA-205ENST00000571186 ATP6V0A1Q93050 837 aa16.61■□□□□ 0.25
CIITA-205ENST00000571186 MLXIPQ9HAP2 919 aa16.61■□□□□ 0.25
CIITA-205ENST00000571186 C11orf16Q9NQ32 467 aa16.61■□□□□ 0.25
CIITA-205ENST00000571186 PCDHA1Q9Y5I3 950 aa16.61■□□□□ 0.25
CIITA-205ENST00000571186 C17orf102A2RUQ5 167 aa16.6■□□□□ 0.25
CIITA-205ENST00000571186 UPP2O95045 317 aa16.6■□□□□ 0.25
CIITA-205ENST00000571186 TGFB3P10600 412 aa16.6■□□□□ 0.25
CIITA-205ENST00000571186 SSTR3P32745 418 aaPredicted RBP16.6■□□□□ 0.25
CIITA-205ENST00000571186 PGM5Q15124 567 aa16.6■□□□□ 0.25
CIITA-205ENST00000571186 PLEKHG4Q58EX7 1191 aa16.6■□□□□ 0.25
CIITA-205ENST00000571186 FAM178BQ8IXR5 827 aa16.6■□□□□ 0.25
CIITA-205ENST00000571186 GJD3Q8N144 294 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms