RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 CCPG1Q9ULG6 757 aa15.38■□□□□ 0.05
CCDC40-205ENST00000571028 hCG_1642624A0A1W2PR95 340 aa15.37■□□□□ 0.05
CCDC40-205ENST00000571028 SOWAHBA6NEL2 793 aa15.37■□□□□ 0.05
CCDC40-205ENST00000571028 PPFIA3O75145 1194 aa15.37■□□□□ 0.05
CCDC40-205ENST00000571028 MYL3P08590 195 aa15.37■□□□□ 0.05
CCDC40-205ENST00000571028 ALAS1P13196 640 aa15.37■□□□□ 0.05
CCDC40-205ENST00000571028 MRE11P49959 708 aa15.37■□□□□ 0.05
CCDC40-205ENST00000571028 GNAQP50148 359 aa15.37■□□□□ 0.05
CCDC40-205ENST00000571028 CPT1AP50416 773 aa15.37■□□□□ 0.05
CCDC40-205ENST00000571028 USH1GQ495M9 461 aa15.37■□□□□ 0.05
CCDC40-205ENST00000571028 BRDTQ58F21 947 aaPredicted RBP15.37■□□□□ 0.05
CCDC40-205ENST00000571028 ZBED2Q9BTP6 218 aa15.37■□□□□ 0.05
CCDC40-205ENST00000571028 RANBP17Q9H2T7 1088 aaKnown RBP15.37■□□□□ 0.05
CCDC40-205ENST00000571028 JMJD4Q9H9V9 463 aa15.37■□□□□ 0.05
CCDC40-205ENST00000571028 NOD1Q9Y239 953 aa15.37■□□□□ 0.05
CCDC40-205ENST00000571028 TRANK1O15050 2925 aa15.36■□□□□ 0.05
CCDC40-205ENST00000571028 BAIAP3O94812 1187 aa15.36■□□□□ 0.05
CCDC40-205ENST00000571028 ALADP13716 330 aa15.36■□□□□ 0.05
CCDC40-205ENST00000571028 PTGS1P23219 599 aa15.36■□□□□ 0.05
CCDC40-205ENST00000571028 PDIA3P30101 505 aaKnown RBP15.36■□□□□ 0.05
CCDC40-205ENST00000571028 CDC27P30260 824 aa15.36■□□□□ 0.05
CCDC40-205ENST00000571028 SLC35G1Q2M3R5 365 aa15.36■□□□□ 0.05
CCDC40-205ENST00000571028 QRICH1Q2TAL8 776 aa15.36■□□□□ 0.05
CCDC40-205ENST00000571028 TKFCQ3LXA3 575 aa15.36■□□□□ 0.05
CCDC40-205ENST00000571028 GJD3Q8N144 294 aa15.36■□□□□ 0.05
CCDC40-205ENST00000571028 SRBD1Q8N5C6 995 aaKnown RBP15.36■□□□□ 0.05
CCDC40-205ENST00000571028 VWCEQ96DN2 955 aa15.36■□□□□ 0.05
CCDC40-205ENST00000571028 IL17RAQ96F46 866 aa15.36■□□□□ 0.05
CCDC40-205ENST00000571028 TRERF1Q96PN7 1200 aa15.36■□□□□ 0.05
CCDC40-205ENST00000571028 PIGSQ96S52 555 aa15.36■□□□□ 0.05
CCDC40-205ENST00000571028 AGXT2Q9BYV1 514 aa15.36■□□□□ 0.05
CCDC40-205ENST00000571028 NCOA5Q9HCD5 579 aaKnown RBP15.36■□□□□ 0.05
CCDC40-205ENST00000571028 VTA1Q9NP79 307 aa15.36■□□□□ 0.05
CCDC40-205ENST00000571028 PDGFCQ9NRA1 345 aa15.36■□□□□ 0.05
CCDC40-205ENST00000571028 TPCN1Q9ULQ1 816 aa15.36■□□□□ 0.05
CCDC40-205ENST00000571028 ZNF536O15090 1300 aa15.36■□□□□ 0.05
CCDC40-205ENST00000571028 PIEZO1Q92508 2521 aa15.36■□□□□ 0.05
CCDC40-205ENST00000571028 PITPNM1O00562 1244 aa15.35■□□□□ 0.05
CCDC40-205ENST00000571028 CYTH3O43739 400 aa15.35■□□□□ 0.05
CCDC40-205ENST00000571028 DTNBO60941 627 aa15.35■□□□□ 0.05
CCDC40-205ENST00000571028 ADD1P35611 737 aaKnown RBP15.35■□□□□ 0.05
CCDC40-205ENST00000571028 BFSP2Q13515 415 aa15.35■□□□□ 0.05
CCDC40-205ENST00000571028 RABEP1Q15276 862 aa15.35■□□□□ 0.05
CCDC40-205ENST00000571028 ANKRD1Q15327 319 aa15.35■□□□□ 0.05
CCDC40-205ENST00000571028 TMTC3Q6ZXV5 915 aa15.35■□□□□ 0.05
CCDC40-205ENST00000571028 GDPD5Q8WTR4 605 aa15.35■□□□□ 0.05
CCDC40-205ENST00000571028 MAP3K14Q99558 947 aa15.35■□□□□ 0.05
CCDC40-205ENST00000571028 LZTS2Q9BRK4 669 aa15.35■□□□□ 0.05
CCDC40-205ENST00000571028 MTG1Q9BT17 334 aaPredicted RBP15.35■□□□□ 0.05
CCDC40-205ENST00000571028 SLKQ9H2G2 1235 aaPredicted RBP15.35■□□□□ 0.05
CCDC40-205ENST00000571028 UBE2ZQ9H832 354 aaPredicted RBP15.35■□□□□ 0.05
CCDC40-205ENST00000571028 RBM28Q9NW13 759 aaKnown RBP15.35■□□□□ 0.05
CCDC40-205ENST00000571028 LMCD1Q9NZU5 365 aa15.35■□□□□ 0.05
CCDC40-205ENST00000571028 PRRC2BQ5JSZ5 2229 aaKnown RBP15.35■□□□□ 0.05
CCDC40-205ENST00000571028 ARHGEF15O94989 841 aa15.34■□□□□ 0.05
CCDC40-205ENST00000571028 ICAM1P05362 532 aa15.34■□□□□ 0.05
CCDC40-205ENST00000571028 TAPT1Q6NXT6 567 aa15.34■□□□□ 0.05
CCDC40-205ENST00000571028 NSMFQ6X4W1 530 aa15.34■□□□□ 0.05
CCDC40-205ENST00000571028 FBXO11Q86XK2 927 aa15.34■□□□□ 0.05
CCDC40-205ENST00000571028 FBXL16Q8N461 479 aa15.34■□□□□ 0.05
CCDC40-205ENST00000571028 RRP36Q96EU6 259 aaKnown RBP15.34■□□□□ 0.05
CCDC40-205ENST00000571028 RIOX1Q9H6W3 641 aa15.34■□□□□ 0.05
CCDC40-205ENST00000571028 CD320Q9NPF0 282 aa15.34■□□□□ 0.05
CCDC40-205ENST00000571028 FAM217BQ9NTX9 383 aaPredicted RBP15.34■□□□□ 0.05
CCDC40-205ENST00000571028 MTUS1Q9ULD2 1270 aa15.34■□□□□ 0.05
CCDC40-205ENST00000571028 DDX49Q9Y6V7 483 aaKnown RBP15.34■□□□□ 0.05
CCDC40-205ENST00000571028 IQCF3P0C7M6 154 aa15.33■□□□□ 0.04
CCDC40-205ENST00000571028 KCNA5P22460 613 aa15.33■□□□□ 0.04
CCDC40-205ENST00000571028 PURAQ00577 322 aaKnown RBP15.33■□□□□ 0.04
CCDC40-205ENST00000571028 DUSP28Q4G0W2 176 aa15.33■□□□□ 0.04
CCDC40-205ENST00000571028 MUM1L1Q5H9M0 696 aa15.33■□□□□ 0.04
CCDC40-205ENST00000571028 CCDC155Q8N6L0 562 aa15.33■□□□□ 0.04
CCDC40-205ENST00000571028 NECAB1Q8N987 351 aa15.33■□□□□ 0.04
CCDC40-205ENST00000571028 OR6J1Q8NGC5 347 aa15.33■□□□□ 0.04
CCDC40-205ENST00000571028 ZNF274Q96GC6 653 aaPredicted RBP15.33■□□□□ 0.04
CCDC40-205ENST00000571028 WDR11Q9BZH6 1224 aa15.33■□□□□ 0.04
CCDC40-205ENST00000571028 ADD3Q9UEY8 706 aaKnown RBP15.33■□□□□ 0.04
CCDC40-205ENST00000571028 SEC63Q9UGP8 760 aaKnown RBP15.33■□□□□ 0.04
CCDC40-205ENST00000571028 V9GY48 417 aaPredicted RBP15.33■□□□□ 0.04
CCDC40-205ENST00000571028 MUC6Q6W4X9 2439 aa15.32■□□□□ 0.04
CCDC40-205ENST00000571028 CCDC196A0A1B0GTZ2 297 aa15.32■□□□□ 0.04
CCDC40-205ENST00000571028 CPLX1O14810 134 aa15.32■□□□□ 0.04
CCDC40-205ENST00000571028 ZBTB5O15062 677 aa15.32■□□□□ 0.04
CCDC40-205ENST00000571028 LPXNO60711 386 aa15.32■□□□□ 0.04
CCDC40-205ENST00000571028 LARGE1O95461 756 aa15.32■□□□□ 0.04
CCDC40-205ENST00000571028 CHMP4BP1P59074 171 aa15.32■□□□□ 0.04
CCDC40-205ENST00000571028 NBPF20Q3BBV1 942 aa15.32■□□□□ 0.04
CCDC40-205ENST00000571028 TMEM63BQ5T3F8 832 aa15.32■□□□□ 0.04
CCDC40-205ENST00000571028 FAM178BQ8IXR5 827 aa15.32■□□□□ 0.04
CCDC40-205ENST00000571028 SPZ1Q9BXG8 430 aa15.32■□□□□ 0.04
CCDC40-205ENST00000571028 AMNQ9BXJ7 453 aa15.32■□□□□ 0.04
CCDC40-205ENST00000571028 CYP39A1Q9NYL5 469 aa15.32■□□□□ 0.04
CCDC40-205ENST00000571028 MCM3APO60318 1980 aa15.31■□□□□ 0.04
CCDC40-205ENST00000571028 PNMA6FA0A0J9YX94 578 aa15.31■□□□□ 0.04
CCDC40-205ENST00000571028 ST18O60284 1047 aa15.31■□□□□ 0.04
CCDC40-205ENST00000571028 PPP1R11O60927 126 aaPredicted RBP15.31■□□□□ 0.04
CCDC40-205ENST00000571028 RCAN1P53805 252 aa15.31■□□□□ 0.04
CCDC40-205ENST00000571028 EVCP57679 992 aa15.31■□□□□ 0.04
CCDC40-205ENST00000571028 SCRN1Q12765 414 aa15.31■□□□□ 0.04
CCDC40-205ENST00000571028 ME3Q16798 604 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms