RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 NFKBIBQ15653 356 aa4□□□□□ -1.77
SMG6-208ENST00000570874 TM4SF20Q53R12 229 aa4□□□□□ -1.77
SMG6-208ENST00000570874 USPL1Q5W0Q7 1092 aa4□□□□□ -1.77
SMG6-208ENST00000570874 CXorf57Q6NSI4 855 aaKnown RBP4□□□□□ -1.77
SMG6-208ENST00000570874 PLBD1Q6P4A8 553 aa4□□□□□ -1.77
SMG6-208ENST00000570874 PI16Q6UXB8 463 aa4□□□□□ -1.77
SMG6-208ENST00000570874 CYP26C1Q6V0L0 522 aa4□□□□□ -1.77
SMG6-208ENST00000570874 CAPN12Q6ZSI9 719 aa4□□□□□ -1.77
SMG6-208ENST00000570874 ILDR2Q71H61 639 aa4□□□□□ -1.77
SMG6-208ENST00000570874 BTN2A1Q7KYR7 527 aa4□□□□□ -1.77
SMG6-208ENST00000570874 SDCCAG8Q86SQ7 713 aaPredicted RBP4□□□□□ -1.77
SMG6-208ENST00000570874 ZBTB46Q86UZ6 589 aa4□□□□□ -1.77
SMG6-208ENST00000570874 ELOA2Q8IYF1 753 aaPredicted RBP4□□□□□ -1.77
SMG6-208ENST00000570874 CNTROBQ8N137 903 aa4□□□□□ -1.77
SMG6-208ENST00000570874 NKAPQ8N5F7 415 aaKnown RBP4□□□□□ -1.77
SMG6-208ENST00000570874 KLHL23Q8NBE8 558 aa4□□□□□ -1.77
SMG6-208ENST00000570874 KCT2Q8NC54 265 aa4□□□□□ -1.77
SMG6-208ENST00000570874 GSDMBQ8TAX9 411 aa4□□□□□ -1.77
SMG6-208ENST00000570874 FAM174AQ8TBP5 190 aa4□□□□□ -1.77
SMG6-208ENST00000570874 PXYLP1Q8TE99 480 aa4□□□□□ -1.77
SMG6-208ENST00000570874 LRRN4Q8WUT4 740 aa4□□□□□ -1.77
SMG6-208ENST00000570874 PTCD2Q8WV60 388 aaKnown RBP4□□□□□ -1.77
SMG6-208ENST00000570874 C17orf50Q8WW18 174 aa4□□□□□ -1.77
SMG6-208ENST00000570874 IPCEF1Q8WWN9 437 aaPredicted RBP4□□□□□ -1.77
SMG6-208ENST00000570874 ALKBH8Q96BT7 664 aaKnown RBP4□□□□□ -1.77
SMG6-208ENST00000570874 CHMP4CQ96CF2 233 aa4□□□□□ -1.77
SMG6-208ENST00000570874 HOOK2Q96ED9 719 aa4□□□□□ -1.77
SMG6-208ENST00000570874 PPM1MQ96MI6 270 aa4□□□□□ -1.77
SMG6-208ENST00000570874 ZMAT2Q96NC0 199 aaKnown RBP4□□□□□ -1.77
SMG6-208ENST00000570874 SEC62Q99442 399 aaKnown RBP4□□□□□ -1.77
SMG6-208ENST00000570874 SMAD5Q99717 465 aaKnown RBP4□□□□□ -1.77
SMG6-208ENST00000570874 LSG1Q9H089 658 aaKnown RBP4□□□□□ -1.77
SMG6-208ENST00000570874 ANTXR1Q9H6X2 564 aa4□□□□□ -1.77
SMG6-208ENST00000570874 HELLSQ9NRZ9 838 aa4□□□□□ -1.77
SMG6-208ENST00000570874 RGS17Q9UGC6 210 aaPredicted RBP4□□□□□ -1.77
SMG6-208ENST00000570874 CTNNA3Q9UI47 895 aa4□□□□□ -1.77
SMG6-208ENST00000570874 ZNF180Q9UJW8 692 aa4□□□□□ -1.77
SMG6-208ENST00000570874 FAM184BQ9ULE4 1060 aa4□□□□□ -1.77
SMG6-208ENST00000570874 ITM2BQ9Y287 266 aa4□□□□□ -1.77
SMG6-208ENST00000570874 CD2APQ9Y5K6 639 aa4□□□□□ -1.77
SMG6-208ENST00000570874 AK5Q9Y6K8 562 aa4□□□□□ -1.77
SMG6-208ENST00000570874 BAZ2BQ9UIF8 2168 aaKnown RBP4□□□□□ -1.77
SMG6-208ENST00000570874 POLR2AP24928 1970 aaKnown RBP4□□□□□ -1.77
SMG6-208ENST00000570874 EP400Q96L91 3159 aa4□□□□□ -1.77
SMG6-208ENST00000570874 COL1A1P02452 1464 aaPredicted RBP3.99□□□□□ -1.77
SMG6-208ENST00000570874 DDX60LQ5H9U9 1706 aaKnown RBP3.99□□□□□ -1.77
SMG6-208ENST00000570874 PNMA6FA0A0J9YX94 578 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 BOLA2-SMG1P6H3BVE0 249 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 STXBP3O00186 592 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 PPEF1O14829 653 aaPredicted RBP3.99□□□□□ -1.77
SMG6-208ENST00000570874 PDPK1O15530 556 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 SGSM2O43147 1006 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 PRPF3O43395 683 aaKnown RBP3.99□□□□□ -1.77
SMG6-208ENST00000570874 TAF5LO75529 589 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 RPS6KA4O75676 772 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 DGAT1O75907 488 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 INMTO95050 263 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 MYCLP1P12525 358 aaPredicted RBP3.99□□□□□ -1.77
SMG6-208ENST00000570874 CPA1P15085 419 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 RPS2P15880 293 aaKnown RBP3.99□□□□□ -1.77
SMG6-208ENST00000570874 CPEP16870 476 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 KRT20P35900 424 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 ATP6V1E1P36543 226 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 GTF2A2P52657 109 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 CSE1LP55060 971 aaKnown RBP3.99□□□□□ -1.77
SMG6-208ENST00000570874 HSD17B7P56937 341 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 GJA9P57773 515 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 GABREP78334 506 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 SKOR1P84550 965 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 CCDC15Q0P6D6 951 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 IFIT5Q13325 482 aaKnown RBP3.99□□□□□ -1.77
SMG6-208ENST00000570874 PPP2R5CQ13362 524 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 RASGRF1Q13972 1273 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 MYBPC3Q14896 1274 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 PSMD6Q15008 389 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 CCDC57Q2TAC2 916 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 METTL24Q5JXM2 366 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 FAAH2Q6GMR7 532 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 IRGCQ6NXR0 463 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 FAM180BQ6P0A1 224 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 C4orf50Q6ZRC1 276 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 FAM196AQ6ZSG2 479 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 RTL10Q7L3V2 364 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 OTOP3Q7RTS5 596 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 KRT27Q7Z3Y8 459 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 NECAB2Q7Z6G3 386 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 GALNT5Q7Z7M9 940 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 ZNF589Q86UQ0 364 aaPredicted RBP3.99□□□□□ -1.77
SMG6-208ENST00000570874 TRIM50Q86XT4 487 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 C7orf61Q8IZ16 206 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 MYOCDQ8IZQ8 938 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 TAB3Q8N5C8 712 aaPredicted RBP3.99□□□□□ -1.77
SMG6-208ENST00000570874 LSMEM1Q8N8F7 131 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 VGLL2Q8N8G2 317 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 MSANTD4Q8NCY6 345 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 PHC3Q8NDX5 983 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 TDRD7Q8NHU6 1098 aaKnown RBP3.99□□□□□ -1.77
SMG6-208ENST00000570874 RIN3Q8TB24 985 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 BRSK1Q8TDC3 778 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 EPS8L1Q8TE68 723 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms