RNA–Protein interactions for RNA: ENST00000570253.5

PKD1-240, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-240ENST00000570253 MLXIPQ9HAP2 919 aa24.45■■□□□ 1.5
PKD1-240ENST00000570253 BDP1A6H8Y1 2624 aa24.45■■□□□ 1.5
PKD1-240ENST00000570253 GCOM1H8Y6P7 765 aaPredicted RBP24.44■■□□□ 1.5
PKD1-240ENST00000570253 HAS3O00219 553 aa24.44■■□□□ 1.5
PKD1-240ENST00000570253 NBNO60934 754 aa24.44■■□□□ 1.5
PKD1-240ENST00000570253 GGPS1O95749 300 aa24.44■■□□□ 1.5
PKD1-240ENST00000570253 POLR2MP0CAP2 368 aa24.44■■□□□ 1.5
PKD1-240ENST00000570253 DEFB103AP81534 67 aa24.44■■□□□ 1.5
PKD1-240ENST00000570253 GHRHRQ02643 423 aa24.44■■□□□ 1.5
PKD1-240ENST00000570253 CELF3Q5SZQ8 465 aaKnown RBP24.44■■□□□ 1.5
PKD1-240ENST00000570253 KRT40Q6A162 431 aa24.44■■□□□ 1.5
PKD1-240ENST00000570253 HOMER1Q86YM7 354 aa24.44■■□□□ 1.5
PKD1-240ENST00000570253 STAG2Q8N3U4 1231 aa24.44■■□□□ 1.5
PKD1-240ENST00000570253 CTAGE1Q96RT6 745 aa24.44■■□□□ 1.5
PKD1-240ENST00000570253 LGR5O75473 907 aa24.43■■□□□ 1.5
PKD1-240ENST00000570253 ARHGEF15O94989 841 aa24.43■■□□□ 1.5
PKD1-240ENST00000570253 AMHP03971 560 aa24.43■■□□□ 1.5
PKD1-240ENST00000570253 SART3Q15020 963 aaKnown RBP24.43■■□□□ 1.5
PKD1-240ENST00000570253 PGM5Q15124 567 aa24.43■■□□□ 1.5
PKD1-240ENST00000570253 GNPTABQ3T906 1256 aa24.43■■□□□ 1.5
PKD1-240ENST00000570253 ZNF618Q5T7W0 954 aa24.43■■□□□ 1.5
PKD1-240ENST00000570253 MYSM1Q5VVJ2 828 aa24.43■■□□□ 1.5
PKD1-240ENST00000570253 STOX1Q6ZVD7 989 aa24.43■■□□□ 1.5
PKD1-240ENST00000570253 COL4A4P53420 1690 aaPredicted RBP24.43■■□□□ 1.5
PKD1-240ENST00000570253 PTPRSQ13332 1948 aa24.42■■□□□ 1.5
PKD1-240ENST00000570253 C17orf102A2RUQ5 167 aa24.42■■□□□ 1.5
PKD1-240ENST00000570253 LCHNA4D1U4 455 aa24.42■■□□□ 1.5
PKD1-240ENST00000570253 NOP56O00567 594 aaKnown RBP24.42■■□□□ 1.5
PKD1-240ENST00000570253 HOXA13P31271 388 aaPredicted RBP24.42■■□□□ 1.5
PKD1-240ENST00000570253 VSIG10LQ86VR7 867 aa24.42■■□□□ 1.5
PKD1-240ENST00000570253 GDPD5Q8WTR4 605 aa24.42■■□□□ 1.5
PKD1-240ENST00000570253 MAD2L2Q9UI95 211 aa24.42■■□□□ 1.5
PKD1-240ENST00000570253 MTUS1Q9ULD2 1270 aa24.42■■□□□ 1.5
PKD1-240ENST00000570253 SORBS3O60504 671 aa24.41■■□□□ 1.5
PKD1-240ENST00000570253 HOXD8P13378 290 aaPredicted RBP24.41■■□□□ 1.5
PKD1-240ENST00000570253 THPOP40225 353 aa24.41■■□□□ 1.5
PKD1-240ENST00000570253 GPNMBQ14956 572 aa24.41■■□□□ 1.5
PKD1-240ENST00000570253 TMCO2Q7Z6W1 182 aaPredicted RBP24.41■■□□□ 1.5
PKD1-240ENST00000570253 RALYLQ86SE5 291 aaKnown RBP24.41■■□□□ 1.5
PKD1-240ENST00000570253 RUFY2Q8WXA3 655 aa24.41■■□□□ 1.5
PKD1-240ENST00000570253 MTMR8Q96EF0 704 aa24.41■■□□□ 1.5
PKD1-240ENST00000570253 INSL6Q9Y581 213 aa24.41■■□□□ 1.5
PKD1-240ENST00000570253 U3KPZ7 1027 aaPredicted RBP24.41■■□□□ 1.5
PKD1-240ENST00000570253 RSPH10B2B2RC85 870 aa24.4■■□□□ 1.5
PKD1-240ENST00000570253 RSPH10BP0C881 870 aa24.4■■□□□ 1.5
PKD1-240ENST00000570253 UBA1P22314 1058 aaKnown RBP24.4■■□□□ 1.5
PKD1-240ENST00000570253 ERVK-21P61565 698 aa24.4■■□□□ 1.5
PKD1-240ENST00000570253 SEC23AQ15436 765 aa24.4■■□□□ 1.5
PKD1-240ENST00000570253 HSDL1Q3SXM5 330 aa24.4■■□□□ 1.5
PKD1-240ENST00000570253 FAM117BQ6P1L5 589 aa24.4■■□□□ 1.5
PKD1-240ENST00000570253 FCHSD1Q86WN1 690 aa24.4■■□□□ 1.5
PKD1-240ENST00000570253 ATP6V0A1Q93050 837 aa24.4■■□□□ 1.5
PKD1-240ENST00000570253 LINC01553A4QN01 128 aa24.39■■□□□ 1.49
PKD1-240ENST00000570253 PALM3A6NDB9 673 aaPredicted RBP24.39■■□□□ 1.49
PKD1-240ENST00000570253 OPLAHO14841 1288 aa24.39■■□□□ 1.49
PKD1-240ENST00000570253 IFIT3O14879 490 aaKnown RBP24.39■■□□□ 1.49
PKD1-240ENST00000570253 STAM2O75886 525 aa24.39■■□□□ 1.49
PKD1-240ENST00000570253 IGHDP01880 384 aa24.39■■□□□ 1.49
PKD1-240ENST00000570253 GNAT1P11488 350 aa24.39■■□□□ 1.49
PKD1-240ENST00000570253 TRIM71Q2Q1W2 868 aaKnown RBP24.39■■□□□ 1.49
PKD1-240ENST00000570253 MYOCDQ8IZQ8 938 aa24.39■■□□□ 1.49
PKD1-240ENST00000570253 H3BRB1 525 aa24.38■■□□□ 1.49
PKD1-240ENST00000570253 LPXNO60711 386 aa24.38■■□□□ 1.49
PKD1-240ENST00000570253 ZNF200P98182 395 aaPredicted RBP24.38■■□□□ 1.49
PKD1-240ENST00000570253 NEDD9Q14511 834 aa24.38■■□□□ 1.49
PKD1-240ENST00000570253 GRM4Q14833 912 aa24.38■■□□□ 1.49
PKD1-240ENST00000570253 SERINC5Q86VE9 423 aa24.38■■□□□ 1.49
PKD1-240ENST00000570253 FAM122AQ96E09 287 aa24.38■■□□□ 1.49
PKD1-240ENST00000570253 PIGSQ96S52 555 aa24.38■■□□□ 1.49
PKD1-240ENST00000570253 TUT1Q9H6E5 874 aaKnown RBP24.38■■□□□ 1.49
PKD1-240ENST00000570253 SUGCTQ9HAC7 445 aa24.38■■□□□ 1.49
PKD1-240ENST00000570253 SIP14410 1827 aa24.38■■□□□ 1.49
PKD1-240ENST00000570253 REV3LO60673 3130 aa24.37■■□□□ 1.49
PKD1-240ENST00000570253 PNMA6FA0A0J9YX94 578 aa24.37■■□□□ 1.49
PKD1-240ENST00000570253 PPP1R11O60927 126 aaPredicted RBP24.37■■□□□ 1.49
PKD1-240ENST00000570253 CAND2O75155 1236 aa24.37■■□□□ 1.49
PKD1-240ENST00000570253 RGS20O76081 388 aa24.37■■□□□ 1.49
PKD1-240ENST00000570253 WTAPQ15007 396 aa24.37■■□□□ 1.49
PKD1-240ENST00000570253 CYB5R4Q7L1T6 521 aa24.37■■□□□ 1.49
PKD1-240ENST00000570253 FBXO22Q8NEZ5 403 aa24.37■■□□□ 1.49
PKD1-240ENST00000570253 SEPT8Q92599 483 aa24.37■■□□□ 1.49
PKD1-240ENST00000570253 SAMD11Q96NU1 681 aa24.37■■□□□ 1.49
PKD1-240ENST00000570253 USP26Q9BXU7 913 aa24.37■■□□□ 1.49
PKD1-240ENST00000570253 RIOX1Q9H6W3 641 aa24.37■■□□□ 1.49
PKD1-240ENST00000570253 ZNF215Q9UL58 517 aaPredicted RBP24.37■■□□□ 1.49
PKD1-240ENST00000570253 XIRP2A4UGR9 3374 aa24.36■■□□□ 1.49
PKD1-240ENST00000570253 PTPROQ16827 1216 aa24.36■■□□□ 1.49
PKD1-240ENST00000570253 SPRED2Q7Z698 418 aa24.36■■□□□ 1.49
PKD1-240ENST00000570253 CATIPQ7Z7H3 387 aa24.36■■□□□ 1.49
PKD1-240ENST00000570253 DBF4BQ8NFT6 615 aa24.36■■□□□ 1.49
PKD1-240ENST00000570253 NCOA7Q8NI08 942 aa24.36■■□□□ 1.49
PKD1-240ENST00000570253 CUL5Q93034 780 aa24.36■■□□□ 1.49
PKD1-240ENST00000570253 HCN4Q9Y3Q4 1203 aa24.36■■□□□ 1.49
PKD1-240ENST00000570253 LGALS2P05162 132 aa24.35■■□□□ 1.49
PKD1-240ENST00000570253 SMIM10L2AP0DMW4 78 aa24.35■■□□□ 1.49
PKD1-240ENST00000570253 SMIM10L2BP0DMW5 78 aa24.35■■□□□ 1.49
PKD1-240ENST00000570253 TRAF7Q6Q0C0 670 aa24.35■■□□□ 1.49
PKD1-240ENST00000570253 IL31RAQ8NI17 732 aa24.35■■□□□ 1.49
PKD1-240ENST00000570253 WNT8BQ93098 351 aa24.35■■□□□ 1.49
PKD1-240ENST00000570253 C16orf70Q9BSU1 422 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms