RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 APOA5Q6Q788 366 aa19.7■□□□□ 0.74
MAP1LC3B-208ENST00000570189 CCDC155Q8N6L0 562 aa19.7■□□□□ 0.74
MAP1LC3B-208ENST00000570189 RBM28Q9NW13 759 aaKnown RBP19.7■□□□□ 0.74
MAP1LC3B-208ENST00000570189 CXXC1Q9P0U4 656 aaPredicted RBP19.7■□□□□ 0.74
MAP1LC3B-208ENST00000570189 SPATA31C2B4DYI2 1134 aa19.69■□□□□ 0.74
MAP1LC3B-208ENST00000570189 PARNO95453 639 aaKnown RBP19.69■□□□□ 0.74
MAP1LC3B-208ENST00000570189 GGPS1O95749 300 aa19.69■□□□□ 0.74
MAP1LC3B-208ENST00000570189 PSEN2P49810 448 aa19.69■□□□□ 0.74
MAP1LC3B-208ENST00000570189 PTGISQ16647 500 aa19.69■□□□□ 0.74
MAP1LC3B-208ENST00000570189 HSDL1Q3SXM5 330 aa19.69■□□□□ 0.74
MAP1LC3B-208ENST00000570189 RASEFQ8IZ41 740 aa19.69■□□□□ 0.74
MAP1LC3B-208ENST00000570189 AFAP1L1Q8TED9 768 aa19.69■□□□□ 0.74
MAP1LC3B-208ENST00000570189 SCLYQ96I15 445 aa19.69■□□□□ 0.74
MAP1LC3B-208ENST00000570189 CCDC136Q96JN2 1154 aa19.69■□□□□ 0.74
MAP1LC3B-208ENST00000570189 FAM161BQ96MY7 647 aa19.69■□□□□ 0.74
MAP1LC3B-208ENST00000570189 SPATA33Q96N06 139 aa19.69■□□□□ 0.74
MAP1LC3B-208ENST00000570189 SENP7Q9BQF6 1050 aa19.69■□□□□ 0.74
MAP1LC3B-208ENST00000570189 PBX4Q9BYU1 374 aa19.69■□□□□ 0.74
MAP1LC3B-208ENST00000570189 A0A0C4DFX4 3053 aa19.69■□□□□ 0.74
MAP1LC3B-208ENST00000570189 UNC80Q8N2C7 3258 aa19.68■□□□□ 0.74
MAP1LC3B-208ENST00000570189 FIBPO43427 364 aa19.68■□□□□ 0.74
MAP1LC3B-208ENST00000570189 IQCF3P0C7M6 154 aa19.68■□□□□ 0.74
MAP1LC3B-208ENST00000570189 HOXC8P31273 242 aa19.68■□□□□ 0.74
MAP1LC3B-208ENST00000570189 NEDD9Q14511 834 aa19.68■□□□□ 0.74
MAP1LC3B-208ENST00000570189 MFSD10Q14728 455 aa19.68■□□□□ 0.74
MAP1LC3B-208ENST00000570189 RAB30Q15771 203 aa19.68■□□□□ 0.74
MAP1LC3B-208ENST00000570189 GDF6Q6KF10 455 aaPredicted RBP19.68■□□□□ 0.74
MAP1LC3B-208ENST00000570189 USP17L6PQ6QN14 398 aa19.68■□□□□ 0.74
MAP1LC3B-208ENST00000570189 FBXL16Q8N461 479 aa19.68■□□□□ 0.74
MAP1LC3B-208ENST00000570189 SLC17A8Q8NDX2 589 aa19.68■□□□□ 0.74
MAP1LC3B-208ENST00000570189 SMARCC2Q8TAQ2 1214 aa19.68■□□□□ 0.74
MAP1LC3B-208ENST00000570189 TIFAQ96CG3 184 aa19.68■□□□□ 0.74
MAP1LC3B-208ENST00000570189 C16orf70Q9BSU1 422 aa19.68■□□□□ 0.74
MAP1LC3B-208ENST00000570189 LRRC2Q9BYS8 371 aa19.68■□□□□ 0.74
MAP1LC3B-208ENST00000570189 hCG_1984214I3L0E3 225 aa19.67■□□□□ 0.74
MAP1LC3B-208ENST00000570189 EPB41L2O43491 1005 aaKnown RBP19.67■□□□□ 0.74
MAP1LC3B-208ENST00000570189 RXRAP19793 462 aa19.67■□□□□ 0.74
MAP1LC3B-208ENST00000570189 FUT2Q10981 343 aa19.67■□□□□ 0.74
MAP1LC3B-208ENST00000570189 SEMA3FQ13275 785 aa19.67■□□□□ 0.74
MAP1LC3B-208ENST00000570189 KIAA0753Q2KHM9 967 aa19.67■□□□□ 0.74
MAP1LC3B-208ENST00000570189 ADCK5Q3MIX3 580 aa19.67■□□□□ 0.74
MAP1LC3B-208ENST00000570189 METTL7BQ6UX53 244 aa19.67■□□□□ 0.74
MAP1LC3B-208ENST00000570189 SYNE3Q6ZMZ3 975 aa19.67■□□□□ 0.74
MAP1LC3B-208ENST00000570189 MICU3Q86XE3 530 aa19.67■□□□□ 0.74
MAP1LC3B-208ENST00000570189 ZNF713Q8N859 430 aaPredicted RBP19.67■□□□□ 0.74
MAP1LC3B-208ENST00000570189 RETREG2Q8NC44 543 aa19.67■□□□□ 0.74
MAP1LC3B-208ENST00000570189 ZNF576Q9H609 170 aa19.67■□□□□ 0.74
MAP1LC3B-208ENST00000570189 PSTPIP2Q9H939 334 aa19.67■□□□□ 0.74
MAP1LC3B-208ENST00000570189 NOD1Q9Y239 953 aa19.67■□□□□ 0.74
MAP1LC3B-208ENST00000570189 CNTNAP5Q8WYK1 1306 aa19.67■□□□□ 0.74
MAP1LC3B-208ENST00000570189 MYO9BQ13459 2157 aa19.67■□□□□ 0.74
MAP1LC3B-208ENST00000570189 CHD7Q9P2D1 2997 aa19.67■□□□□ 0.74
MAP1LC3B-208ENST00000570189 PPP1R18Q6NYC8 613 aa19.66■□□□□ 0.74
MAP1LC3B-208ENST00000570189 OTOP2Q7RTS6 562 aa19.66■□□□□ 0.74
MAP1LC3B-208ENST00000570189 C7orf31Q8N865 590 aa19.66■□□□□ 0.74
MAP1LC3B-208ENST00000570189 PIBF1Q8WXW3 757 aa19.66■□□□□ 0.74
MAP1LC3B-208ENST00000570189 GPKOWQ92917 476 aaPredicted RBP eCLIP19.66■□□□□ 0.74
MAP1LC3B-208ENST00000570189 GPRASP2Q96D09 838 aa19.66■□□□□ 0.74
MAP1LC3B-208ENST00000570189 MLXIPQ9HAP2 919 aa19.66■□□□□ 0.74
MAP1LC3B-208ENST00000570189 HDAC6Q9UBN7 1215 aa19.66■□□□□ 0.74
MAP1LC3B-208ENST00000570189 PTPRSQ13332 1948 aa19.66■□□□□ 0.74
MAP1LC3B-208ENST00000570189 NID2Q14112 1375 aa19.66■□□□□ 0.74
MAP1LC3B-208ENST00000570189 KAT6AQ92794 2004 aa19.66■□□□□ 0.74
MAP1LC3B-208ENST00000570189 PRUNE2Q8WUY3 3088 aa19.65■□□□□ 0.74
MAP1LC3B-208ENST00000570189 ZNF286BP0CG31 522 aa19.65■□□□□ 0.74
MAP1LC3B-208ENST00000570189 ACTN1P12814 892 aa19.65■□□□□ 0.74
MAP1LC3B-208ENST00000570189 HSPA4P34932 840 aa19.65■□□□□ 0.74
MAP1LC3B-208ENST00000570189 PTK7Q13308 1070 aa19.65■□□□□ 0.74
MAP1LC3B-208ENST00000570189 CMTR1Q8N1G2 835 aaKnown RBP19.65■□□□□ 0.74
MAP1LC3B-208ENST00000570189 GIMAP8Q8ND71 665 aaPredicted RBP19.65■□□□□ 0.74
MAP1LC3B-208ENST00000570189 DHX38Q92620 1227 aaKnown RBP19.65■□□□□ 0.74
MAP1LC3B-208ENST00000570189 CDHR1Q96JP9 859 aa19.65■□□□□ 0.74
MAP1LC3B-208ENST00000570189 USP26Q9BXU7 913 aa19.65■□□□□ 0.74
MAP1LC3B-208ENST00000570189 SLC4A7Q9Y6M7 1214 aa19.65■□□□□ 0.74
MAP1LC3B-208ENST00000570189 GRXCR1A8MXD5 290 aa19.64■□□□□ 0.73
MAP1LC3B-208ENST00000570189 MAFGO15525 162 aa19.64■□□□□ 0.73
MAP1LC3B-208ENST00000570189 ZBTB43O43298 467 aa19.64■□□□□ 0.73
MAP1LC3B-208ENST00000570189 BAIAP3O94812 1187 aa19.64■□□□□ 0.73
MAP1LC3B-208ENST00000570189 CXCL10P02778 98 aa19.64■□□□□ 0.73
MAP1LC3B-208ENST00000570189 SELPP16109 830 aa19.64■□□□□ 0.73
MAP1LC3B-208ENST00000570189 PBX2P40425 430 aa19.64■□□□□ 0.73
MAP1LC3B-208ENST00000570189 PHOSPHO2Q8TCD6 241 aa19.64■□□□□ 0.73
MAP1LC3B-208ENST00000570189 MYLIPQ8WY64 445 aa19.64■□□□□ 0.73
MAP1LC3B-208ENST00000570189 MSRAQ9UJ68 235 aa19.64■□□□□ 0.73
MAP1LC3B-208ENST00000570189 BRPF3Q9ULD4 1205 aa19.64■□□□□ 0.73
MAP1LC3B-208ENST00000570189 PCDHA11Q9Y5I1 949 aa19.64■□□□□ 0.73
MAP1LC3B-208ENST00000570189 H3BRB1 525 aa19.63■□□□□ 0.73
MAP1LC3B-208ENST00000570189 LGALS2P05162 132 aa19.63■□□□□ 0.73
MAP1LC3B-208ENST00000570189 GPNMBQ14956 572 aa19.63■□□□□ 0.73
MAP1LC3B-208ENST00000570189 GRIN2CQ14957 1233 aa19.63■□□□□ 0.73
MAP1LC3B-208ENST00000570189 RTN1Q16799 776 aa19.63■□□□□ 0.73
MAP1LC3B-208ENST00000570189 TRIM71Q2Q1W2 868 aaKnown RBP19.63■□□□□ 0.73
MAP1LC3B-208ENST00000570189 NLRX1Q86UT6 975 aa19.63■□□□□ 0.73
MAP1LC3B-208ENST00000570189 PPP1R13LQ8WUF5 828 aa19.63■□□□□ 0.73
MAP1LC3B-208ENST00000570189 SLC9A7Q96T83 725 aa19.63■□□□□ 0.73
MAP1LC3B-208ENST00000570189 GPR20Q99678 358 aa19.63■□□□□ 0.73
MAP1LC3B-208ENST00000570189 AGXT2Q9BYV1 514 aa19.63■□□□□ 0.73
MAP1LC3B-208ENST00000570189 TUT1Q9H6E5 874 aaKnown RBP19.63■□□□□ 0.73
MAP1LC3B-208ENST00000570189 FAM217BQ9NTX9 383 aaPredicted RBP19.63■□□□□ 0.73
MAP1LC3B-208ENST00000570189 REC8O95072 547 aa19.62■□□□□ 0.73
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