RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 MCM9Q9NXL9 1143 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 MYPNQ86TC9 1320 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 ARPC4-TTLL3A0A0A6YYG9 625 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 H7C1W4 665 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 MUSKO15146 869 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 STRNO43815 780 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 TCEA3O75764 348 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 RARBP10826 455 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 NCAM1P13591 858 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 HALP42357 657 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 TCP10Q12799 353 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 GNPTABQ3T906 1256 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 ZC3H12BQ5HYM0 836 aaKnown RBP7.39□□□□□ -1.23
SMG1-217ENST00000569764 ISM2Q6H9L7 571 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 C16orf54Q6UWD8 224 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 NCAPG2Q86XI2 1143 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 LSM14AQ8ND56 463 aaKnown RBP7.39□□□□□ -1.23
SMG1-217ENST00000569764 SLC39A13Q96H72 371 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 WNK4Q96J92 1243 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 GLT1D1Q96MS3 346 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 ZMAT5Q9UDW3 170 aaKnown RBP7.39□□□□□ -1.23
SMG1-217ENST00000569764 XPO7Q9UIA9 1087 aaKnown RBP7.39□□□□□ -1.23
SMG1-217ENST00000569764 GTF2A1LQ9UNN4 478 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 TAF6LQ9Y6J9 622 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 TMOD1P28289 359 aa7.38□□□□□ -1.23
SMG1-217ENST00000569764 PSMC4P43686 418 aa7.38□□□□□ -1.23
SMG1-217ENST00000569764 MAPK8P45983 427 aa7.38□□□□□ -1.23
SMG1-217ENST00000569764 MAPK9P45984 424 aa7.38□□□□□ -1.23
SMG1-217ENST00000569764 FAPQ12884 760 aa7.38□□□□□ -1.23
SMG1-217ENST00000569764 EIF2B5Q13144 721 aaKnown RBP7.38□□□□□ -1.23
SMG1-217ENST00000569764 SAFBQ15424 915 aaKnown RBP eCLIP7.38□□□□□ -1.23
SMG1-217ENST00000569764 ACBD5Q5T8D3 534 aaPredicted RBP7.38□□□□□ -1.23
SMG1-217ENST00000569764 GLYCTKQ8IVS8 523 aa7.38□□□□□ -1.23
SMG1-217ENST00000569764 ANKRD35Q8N283 1001 aa7.38□□□□□ -1.23
SMG1-217ENST00000569764 SGIP1Q9BQI5 828 aa7.38□□□□□ -1.23
SMG1-217ENST00000569764 AFG3L2Q9Y4W6 797 aa7.38□□□□□ -1.23
SMG1-217ENST00000569764 CPLX1O14810 134 aa7.38□□□□□ -1.23
SMG1-217ENST00000569764 CABYRO75952 493 aa7.38□□□□□ -1.23
SMG1-217ENST00000569764 MTHFD1P11586 935 aaKnown RBP7.38□□□□□ -1.23
SMG1-217ENST00000569764 FCER1AP12319 257 aa7.38□□□□□ -1.23
SMG1-217ENST00000569764 NSUN2Q08J23 767 aaKnown RBP eCLIP7.38□□□□□ -1.23
SMG1-217ENST00000569764 IMMTQ16891 758 aaKnown RBP7.38□□□□□ -1.23
SMG1-217ENST00000569764 RABL6Q3YEC7 729 aaPredicted RBP7.38□□□□□ -1.23
SMG1-217ENST00000569764 LDLRAD1Q5T700 205 aa7.38□□□□□ -1.23
SMG1-217ENST00000569764 SPRYD7Q5W111 196 aa7.38□□□□□ -1.23
SMG1-217ENST00000569764 PDXDC2PQ6P474 469 aa7.38□□□□□ -1.23
SMG1-217ENST00000569764 SCYL3Q8IZE3 742 aa7.38□□□□□ -1.23
SMG1-217ENST00000569764 CTCFLQ8NI51 663 aaPredicted RBP7.38□□□□□ -1.23
SMG1-217ENST00000569764 LPAR1Q92633 364 aa7.38□□□□□ -1.23
SMG1-217ENST00000569764 WBP1LQ9NX94 342 aa7.38□□□□□ -1.23
SMG1-217ENST00000569764 MYO5AQ9Y4I1 1855 aaKnown RBP7.38□□□□□ -1.23
SMG1-217ENST00000569764 TAF1P21675 1872 aa7.38□□□□□ -1.23
SMG1-217ENST00000569764 TMEM238LA0A1B0GVL6 79 aa7.38□□□□□ -1.23
SMG1-217ENST00000569764 MINDY4BA8MYZ0 360 aa7.38□□□□□ -1.23
SMG1-217ENST00000569764 ZBTB24O43167 697 aaPredicted RBP7.38□□□□□ -1.23
SMG1-217ENST00000569764 CCDC159P0C7I6 412 aa7.38□□□□□ -1.23
SMG1-217ENST00000569764 PLA2G4AP47712 749 aa7.38□□□□□ -1.23
SMG1-217ENST00000569764 DGKHQ86XP1 1220 aa7.38□□□□□ -1.23
SMG1-217ENST00000569764 TMCO5AQ8N6Q1 288 aa7.38□□□□□ -1.23
SMG1-217ENST00000569764 CELF1Q92879 486 aaKnown RBP7.38□□□□□ -1.23
SMG1-217ENST00000569764 PRM3Q9NNZ6 103 aa7.38□□□□□ -1.23
SMG1-217ENST00000569764 CWC15Q9P013 229 aaKnown RBP7.38□□□□□ -1.23
SMG1-217ENST00000569764 TBC1D7Q9P0N9 293 aa7.38□□□□□ -1.23
SMG1-217ENST00000569764 PCDHGB3Q9Y5G1 929 aa7.38□□□□□ -1.23
SMG1-217ENST00000569764 RIC1Q4ADV7 1423 aa7.38□□□□□ -1.23
SMG1-217ENST00000569764 FOXN3O00409 490 aaPredicted RBP7.38□□□□□ -1.23
SMG1-217ENST00000569764 DPYSL4O14531 572 aa7.38□□□□□ -1.23
SMG1-217ENST00000569764 ADCY3O60266 1144 aa7.38□□□□□ -1.23
SMG1-217ENST00000569764 KATNA1O75449 491 aa7.38□□□□□ -1.23
SMG1-217ENST00000569764 SLC10A3P09131 477 aa7.38□□□□□ -1.23
SMG1-217ENST00000569764 PCP11498 1178 aaKnown RBP7.38□□□□□ -1.23
SMG1-217ENST00000569764 GPS2Q13227 327 aa7.38□□□□□ -1.23
SMG1-217ENST00000569764 C1orf228Q6PIY5 440 aa7.38□□□□□ -1.23
SMG1-217ENST00000569764 ZNF280CQ8ND82 737 aa7.38□□□□□ -1.23
SMG1-217ENST00000569764 STON2Q8WXE9 905 aa7.38□□□□□ -1.23
SMG1-217ENST00000569764 RSRC1Q96IZ7 334 aaKnown RBP7.38□□□□□ -1.23
SMG1-217ENST00000569764 NEK1Q96PY6 1258 aa7.38□□□□□ -1.23
SMG1-217ENST00000569764 PUS3Q9BZE2 481 aaKnown RBP7.38□□□□□ -1.23
SMG1-217ENST00000569764 DEF6Q9H4E7 631 aa7.38□□□□□ -1.23
SMG1-217ENST00000569764 GREM2Q9H772 168 aa7.38□□□□□ -1.23
SMG1-217ENST00000569764 CEP131Q9UPN4 1083 aa7.38□□□□□ -1.23
SMG1-217ENST00000569764 NR1I2O75469 434 aa7.37□□□□□ -1.23
SMG1-217ENST00000569764 XRCC5P13010 732 aaKnown RBP7.37□□□□□ -1.23
SMG1-217ENST00000569764 BTDP43251 543 aa7.37□□□□□ -1.23
SMG1-217ENST00000569764 IRX1P78414 480 aaPredicted RBP7.37□□□□□ -1.23
SMG1-217ENST00000569764 PTH1RQ03431 593 aa7.37□□□□□ -1.23
SMG1-217ENST00000569764 LRRC24Q50LG9 513 aa7.37□□□□□ -1.23
SMG1-217ENST00000569764 C15orf52Q6ZUT6 534 aaKnown RBP7.37□□□□□ -1.23
SMG1-217ENST00000569764 ATG9AQ7Z3C6 839 aa7.37□□□□□ -1.23
SMG1-217ENST00000569764 PLEKHH3Q7Z736 793 aa7.37□□□□□ -1.23
SMG1-217ENST00000569764 RASEFQ8IZ41 740 aa7.37□□□□□ -1.23
SMG1-217ENST00000569764 ANKRD49Q8WVL7 239 aa7.37□□□□□ -1.23
SMG1-217ENST00000569764 EXOC4Q96A65 974 aa7.37□□□□□ -1.23
SMG1-217ENST00000569764 ARPP21Q9UBL0 812 aaPredicted RBP7.37□□□□□ -1.23
SMG1-217ENST00000569764 POTEB2H3BUK9 544 aa7.37□□□□□ -1.23
SMG1-217ENST00000569764 COL6A1P12109 1028 aa7.37□□□□□ -1.23
SMG1-217ENST00000569764 RENBPP51606 427 aa7.37□□□□□ -1.23
SMG1-217ENST00000569764 FANCCQ00597 558 aa7.37□□□□□ -1.23
SMG1-217ENST00000569764 TFCP2Q12800 502 aa7.37□□□□□ -1.23
SMG1-217ENST00000569764 COX10Q12887 443 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms