RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 WDR11Q9BZH6 1224 aa12.27□□□□□ -0.45
PDXDC1-216ENST00000569715 TRIM9Q9C026 710 aa12.27□□□□□ -0.45
PDXDC1-216ENST00000569715 R3HDMLQ9H3Y0 253 aa12.27□□□□□ -0.45
PDXDC1-216ENST00000569715 A1CFQ9NQ94 594 aaKnown RBP12.27□□□□□ -0.45
PDXDC1-216ENST00000569715 PKD2L1Q9P0L9 805 aa12.27□□□□□ -0.45
PDXDC1-216ENST00000569715 PNMA2Q9UL42 364 aa12.27□□□□□ -0.45
PDXDC1-216ENST00000569715 POTEFA5A3E0 1075 aa12.27□□□□□ -0.45
PDXDC1-216ENST00000569715 POTEGQ6S5H5 508 aa12.27□□□□□ -0.45
PDXDC1-216ENST00000569715 SLC5A5Q92911 643 aa12.27□□□□□ -0.45
PDXDC1-216ENST00000569715 MAGEF1Q9HAY2 307 aa12.27□□□□□ -0.45
PDXDC1-216ENST00000569715 PXMP2Q9NR77 195 aa12.27□□□□□ -0.45
PDXDC1-216ENST00000569715 STK17AQ9UEE5 414 aa12.27□□□□□ -0.45
PDXDC1-216ENST00000569715 GDAQ9Y2T3 454 aa12.27□□□□□ -0.45
PDXDC1-216ENST00000569715 E9PMD0 336 aa12.26□□□□□ -0.45
PDXDC1-216ENST00000569715 CHMP2AO43633 222 aa12.26□□□□□ -0.45
PDXDC1-216ENST00000569715 PSMD10O75832 226 aa12.26□□□□□ -0.45
PDXDC1-216ENST00000569715 IRX3P78415 501 aaPredicted RBP12.26□□□□□ -0.45
PDXDC1-216ENST00000569715 KMT5BQ4FZB7 885 aa12.26□□□□□ -0.45
PDXDC1-216ENST00000569715 HYIQ5T013 277 aa12.26□□□□□ -0.45
PDXDC1-216ENST00000569715 LRCH2Q5VUJ6 765 aa12.26□□□□□ -0.45
PDXDC1-216ENST00000569715 KLHL10Q6JEL2 608 aa12.26□□□□□ -0.45
PDXDC1-216ENST00000569715 AGTPBP1Q9UPW5 1226 aa12.26□□□□□ -0.45
PDXDC1-216ENST00000569715 KIAA1024Q9UPX6 916 aa12.26□□□□□ -0.45
PDXDC1-216ENST00000569715 MYMKA6NI61 221 aa12.26□□□□□ -0.45
PDXDC1-216ENST00000569715 PPP1R3GB7ZBB8 358 aa12.26□□□□□ -0.45
PDXDC1-216ENST00000569715 COBLO75128 1261 aa12.26□□□□□ -0.45
PDXDC1-216ENST00000569715 MYL5Q02045 173 aa12.26□□□□□ -0.45
PDXDC1-216ENST00000569715 MKRN3Q13064 507 aaKnown RBP12.26□□□□□ -0.45
PDXDC1-216ENST00000569715 PCNX4Q63HM2 1172 aa12.26□□□□□ -0.45
PDXDC1-216ENST00000569715 CATSPER3Q86XQ3 398 aa12.26□□□□□ -0.45
PDXDC1-216ENST00000569715 PDCD2LQ9BRP1 358 aa12.26□□□□□ -0.45
PDXDC1-216ENST00000569715 PAGR1Q9BTK6 254 aa12.26□□□□□ -0.45
PDXDC1-216ENST00000569715 ACAD9Q9H845 621 aa12.26□□□□□ -0.45
PDXDC1-216ENST00000569715 MAP3K20Q9NYL2 800 aaKnown RBP12.26□□□□□ -0.45
PDXDC1-216ENST00000569715 KIAA1217Q5T5P2 1943 aa12.26□□□□□ -0.45
PDXDC1-216ENST00000569715 IKBKBO14920 756 aa12.26□□□□□ -0.45
PDXDC1-216ENST00000569715 SPATA31C1P0DKV0 1188 aa12.26□□□□□ -0.45
PDXDC1-216ENST00000569715 MYCLP12524 364 aaPredicted RBP12.26□□□□□ -0.45
PDXDC1-216ENST00000569715 ATP1A3P13637 1013 aa12.26□□□□□ -0.45
PDXDC1-216ENST00000569715 CYP4A11Q02928 519 aa12.26□□□□□ -0.45
PDXDC1-216ENST00000569715 GPAT2Q6NUI2 795 aa12.26□□□□□ -0.45
PDXDC1-216ENST00000569715 ZNF577Q9BSK1 485 aa12.26□□□□□ -0.45
PDXDC1-216ENST00000569715 TRIM5Q9C035 493 aa12.26□□□□□ -0.45
PDXDC1-216ENST00000569715 CYP39A1Q9NYL5 469 aa12.26□□□□□ -0.45
PDXDC1-216ENST00000569715 CNMDO75829 334 aa12.25□□□□□ -0.45
PDXDC1-216ENST00000569715 ZNF75DP51815 510 aa12.25□□□□□ -0.45
PDXDC1-216ENST00000569715 HERVK_113P62684 666 aa12.25□□□□□ -0.45
PDXDC1-216ENST00000569715 ASIC1P78348 528 aa12.25□□□□□ -0.45
PDXDC1-216ENST00000569715 TKFCQ3LXA3 575 aa12.25□□□□□ -0.45
PDXDC1-216ENST00000569715 HSP90AA4PQ58FG1 418 aa12.25□□□□□ -0.45
PDXDC1-216ENST00000569715 SV2BQ7L1I2 683 aa12.25□□□□□ -0.45
PDXDC1-216ENST00000569715 OTOP1Q7RTM1 612 aa12.25□□□□□ -0.45
PDXDC1-216ENST00000569715 SLC10A4Q96EP9 437 aa12.25□□□□□ -0.45
PDXDC1-216ENST00000569715 C7orf25Q9BPX7 421 aa12.25□□□□□ -0.45
PDXDC1-216ENST00000569715 KCNH7Q9NS40 1196 aa12.25□□□□□ -0.45
PDXDC1-216ENST00000569715 MAPK8IP1Q9UQF2 711 aa12.25□□□□□ -0.45
PDXDC1-216ENST00000569715 UBIAD1Q9Y5Z9 338 aa12.25□□□□□ -0.45
PDXDC1-216ENST00000569715 KDM3AQ9Y4C1 1321 aa12.25□□□□□ -0.45
PDXDC1-216ENST00000569715 STX17P56962 302 aa12.25□□□□□ -0.45
PDXDC1-216ENST00000569715 SETQ01105 290 aaPredicted RBP12.25□□□□□ -0.45
PDXDC1-216ENST00000569715 ARHGEF16Q5VV41 709 aa12.25□□□□□ -0.45
PDXDC1-216ENST00000569715 TXNRD2Q9NNW7 524 aa12.25□□□□□ -0.45
PDXDC1-216ENST00000569715 RGL1Q9NZL6 768 aa12.25□□□□□ -0.45
PDXDC1-216ENST00000569715 DDX39AO00148 427 aaKnown RBP12.25□□□□□ -0.45
PDXDC1-216ENST00000569715 IPO5O00410 1097 aaKnown RBP12.25□□□□□ -0.45
PDXDC1-216ENST00000569715 GAS7O60861 476 aa12.25□□□□□ -0.45
PDXDC1-216ENST00000569715 PSMC6P62333 389 aa12.25□□□□□ -0.45
PDXDC1-216ENST00000569715 SARM1Q6SZW1 724 aa12.25□□□□□ -0.45
PDXDC1-216ENST00000569715 DYMQ7RTS9 669 aa12.25□□□□□ -0.45
PDXDC1-216ENST00000569715 SAMD3Q8N6K7 520 aa12.25□□□□□ -0.45
PDXDC1-216ENST00000569715 HPS3Q969F9 1004 aa12.25□□□□□ -0.45
PDXDC1-216ENST00000569715 UNC45AQ9H3U1 944 aa12.25□□□□□ -0.45
PDXDC1-216ENST00000569715 FANCLQ9NW38 375 aa12.25□□□□□ -0.45
PDXDC1-216ENST00000569715 DOCK5Q9H7D0 1870 aa12.25□□□□□ -0.45
PDXDC1-216ENST00000569715 CELF2O95319 508 aaKnown RBP12.24□□□□□ -0.45
PDXDC1-216ENST00000569715 ZNF658Q5TYW1 1059 aaPredicted RBP12.24□□□□□ -0.45
PDXDC1-216ENST00000569715 EIF2AK1Q9BQI3 630 aaKnown RBP12.24□□□□□ -0.45
PDXDC1-216ENST00000569715 GBA2Q9HCG7 927 aaPredicted RBP12.24□□□□□ -0.45
PDXDC1-216ENST00000569715 CTNND2Q9UQB3 1225 aa12.24□□□□□ -0.45
PDXDC1-216ENST00000569715 RABGAP1Q9Y3P9 1069 aa12.24□□□□□ -0.45
PDXDC1-216ENST00000569715 SMTNL1A8MU46 457 aa12.24□□□□□ -0.45
PDXDC1-216ENST00000569715 MYL1P05976 194 aa12.24□□□□□ -0.45
PDXDC1-216ENST00000569715 ITGB3BPQ13352 177 aaPredicted RBP12.24□□□□□ -0.45
PDXDC1-216ENST00000569715 PPP2R5CQ13362 524 aa12.24□□□□□ -0.45
PDXDC1-216ENST00000569715 HAUS3Q68CZ6 603 aa12.24□□□□□ -0.45
PDXDC1-216ENST00000569715 SPC24Q8NBT2 197 aa12.24□□□□□ -0.45
PDXDC1-216ENST00000569715 SPATC1LQ9H0A9 340 aa12.24□□□□□ -0.45
PDXDC1-216ENST00000569715 NT5C3AQ9H0P0 336 aa12.24□□□□□ -0.45
PDXDC1-216ENST00000569715 DACH1Q9UI36 760 aa12.24□□□□□ -0.45
PDXDC1-216ENST00000569715 ASTN1O14525 1302 aa12.24□□□□□ -0.45
PDXDC1-216ENST00000569715 SSBP05455 408 aaKnown RBP eCLIP12.24□□□□□ -0.45
PDXDC1-216ENST00000569715 RMND1Q9NWS8 449 aa12.24□□□□□ -0.45
PDXDC1-216ENST00000569715 NFE2L3Q9Y4A8 694 aa12.24□□□□□ -0.45
PDXDC1-216ENST00000569715 SOCS7O14512 581 aa12.23□□□□□ -0.45
PDXDC1-216ENST00000569715 RHOBTB3O94955 611 aa12.23□□□□□ -0.45
PDXDC1-216ENST00000569715 FCER1AP12319 257 aa12.23□□□□□ -0.45
PDXDC1-216ENST00000569715 RPA1P27694 616 aa12.23□□□□□ -0.45
PDXDC1-216ENST00000569715 PRCPP42785 496 aa12.23□□□□□ -0.45
PDXDC1-216ENST00000569715 CNTN2Q02246 1040 aa12.23□□□□□ -0.45
PDXDC1-216ENST00000569715 SNAPC2Q13487 334 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms