RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 OSBPL3Q9H4L5 887 aa13.07□□□□□ -0.32
CHRFAM7A-206ENST00000569278 TRIOO75962 3097 aa13.07□□□□□ -0.32
CHRFAM7A-206ENST00000569278 CCDC171Q6TFL3 1326 aa13.07□□□□□ -0.32
CHRFAM7A-206ENST00000569278 CXCL10P02778 98 aa13.06□□□□□ -0.32
CHRFAM7A-206ENST00000569278 CDC37Q16543 378 aaPredicted RBP13.06□□□□□ -0.32
CHRFAM7A-206ENST00000569278 SLC35G1Q2M3R5 365 aa13.06□□□□□ -0.32
CHRFAM7A-206ENST00000569278 RGS22Q8NE09 1264 aa13.06□□□□□ -0.32
CHRFAM7A-206ENST00000569278 GDPD5Q8WTR4 605 aa13.06□□□□□ -0.32
CHRFAM7A-206ENST00000569278 TAAR1Q96RJ0 339 aa13.06□□□□□ -0.32
CHRFAM7A-206ENST00000569278 LARP6Q9BRS8 491 aaKnown RBP13.06□□□□□ -0.32
CHRFAM7A-206ENST00000569278 EPHX3Q9H6B9 360 aa13.06□□□□□ -0.32
CHRFAM7A-206ENST00000569278 CD320Q9NPF0 282 aa13.06□□□□□ -0.32
CHRFAM7A-206ENST00000569278 TOMM22Q9NS69 142 aa13.06□□□□□ -0.32
CHRFAM7A-206ENST00000569278 RGS20O76081 388 aa13.05□□□□□ -0.32
CHRFAM7A-206ENST00000569278 BAIAP3O94812 1187 aa13.05□□□□□ -0.32
CHRFAM7A-206ENST00000569278 HOXD8P13378 290 aaPredicted RBP13.05□□□□□ -0.32
CHRFAM7A-206ENST00000569278 PTGISQ16647 500 aa13.05□□□□□ -0.32
CHRFAM7A-206ENST00000569278 IL25Q9H293 177 aa13.05□□□□□ -0.32
CHRFAM7A-206ENST00000569278 GTF2IRD1Q9UHL9 959 aa13.05□□□□□ -0.32
CHRFAM7A-206ENST00000569278 RAD50Q92878 1312 aa13.05□□□□□ -0.32
CHRFAM7A-206ENST00000569278 MYH7BA7E2Y1 1941 aa13.04□□□□□ -0.32
CHRFAM7A-206ENST00000569278 HAS3O00219 553 aa13.04□□□□□ -0.32
CHRFAM7A-206ENST00000569278 KPNA6O60684 536 aa13.04□□□□□ -0.32
CHRFAM7A-206ENST00000569278 PPP1R11O60927 126 aaPredicted RBP13.04□□□□□ -0.32
CHRFAM7A-206ENST00000569278 F2P00734 622 aa13.04□□□□□ -0.32
CHRFAM7A-206ENST00000569278 CKBP12277 381 aa13.04□□□□□ -0.32
CHRFAM7A-206ENST00000569278 ACTN1P12814 892 aa13.04□□□□□ -0.32
CHRFAM7A-206ENST00000569278 GHRHRQ02643 423 aa13.04□□□□□ -0.32
CHRFAM7A-206ENST00000569278 BFSP2Q13515 415 aa13.04□□□□□ -0.32
CHRFAM7A-206ENST00000569278 BECN1Q14457 450 aa13.04□□□□□ -0.32
CHRFAM7A-206ENST00000569278 QRICH1Q2TAL8 776 aa13.04□□□□□ -0.32
CHRFAM7A-206ENST00000569278 CASC1Q6TDU7 716 aa13.04□□□□□ -0.32
CHRFAM7A-206ENST00000569278 LRRC8DQ7L1W4 858 aa13.04□□□□□ -0.32
CHRFAM7A-206ENST00000569278 ADGRF4Q8IZF3 695 aa13.04□□□□□ -0.32
CHRFAM7A-206ENST00000569278 CAGE1Q8TC20 777 aa13.04□□□□□ -0.32
CHRFAM7A-206ENST00000569278 AFAP1L1Q8TED9 768 aa13.04□□□□□ -0.32
CHRFAM7A-206ENST00000569278 EMID1Q96A84 441 aaPredicted RBP13.04□□□□□ -0.32
CHRFAM7A-206ENST00000569278 TTC14Q96N46 770 aa13.04□□□□□ -0.32
CHRFAM7A-206ENST00000569278 OSBPL7Q9BZF2 842 aa13.04□□□□□ -0.32
CHRFAM7A-206ENST00000569278 LNPKQ9C0E8 428 aa13.04□□□□□ -0.32
CHRFAM7A-206ENST00000569278 HDAC6Q9UBN7 1215 aa13.04□□□□□ -0.32
CHRFAM7A-206ENST00000569278 DDX41Q9UJV9 622 aaKnown RBP13.04□□□□□ -0.32
CHRFAM7A-206ENST00000569278 COL4A6Q14031 1691 aa13.03□□□□□ -0.32
CHRFAM7A-206ENST00000569278 ZNF286BP0CG31 522 aa13.03□□□□□ -0.32
CHRFAM7A-206ENST00000569278 SELPP16109 830 aa13.03□□□□□ -0.32
CHRFAM7A-206ENST00000569278 ZNF200P98182 395 aaPredicted RBP13.03□□□□□ -0.32
CHRFAM7A-206ENST00000569278 DSG2Q14126 1118 aa13.03□□□□□ -0.32
CHRFAM7A-206ENST00000569278 SKIV2LQ15477 1246 aaKnown RBP13.03□□□□□ -0.32
CHRFAM7A-206ENST00000569278 GPATCH4Q5T3I0 446 aaKnown RBP13.03□□□□□ -0.32
CHRFAM7A-206ENST00000569278 SEPT14Q6ZU15 432 aa13.03□□□□□ -0.32
CHRFAM7A-206ENST00000569278 ENAHQ8N8S7 591 aaPredicted RBP13.03□□□□□ -0.32
CHRFAM7A-206ENST00000569278 PNMA1Q8ND90 353 aa13.03□□□□□ -0.32
CHRFAM7A-206ENST00000569278 IL31RAQ8NI17 732 aa13.03□□□□□ -0.32
CHRFAM7A-206ENST00000569278 ANKS1AQ92625 1134 aa13.03□□□□□ -0.32
CHRFAM7A-206ENST00000569278 LRFN3Q9BTN0 628 aa13.03□□□□□ -0.32
CHRFAM7A-206ENST00000569278 FTOQ9C0B1 505 aaKnown RBP eCLIP13.03□□□□□ -0.32
CHRFAM7A-206ENST00000569278 ABCB11O95342 1321 aa13.03□□□□□ -0.32
CHRFAM7A-206ENST00000569278 DOCK5Q9H7D0 1870 aa13.03□□□□□ -0.32
CHRFAM7A-206ENST00000569278 LINC01553A4QN01 128 aa13.02□□□□□ -0.33
CHRFAM7A-206ENST00000569278 EPB41L2O43491 1005 aaKnown RBP13.02□□□□□ -0.33
CHRFAM7A-206ENST00000569278 GJB5O95377 273 aa13.02□□□□□ -0.33
CHRFAM7A-206ENST00000569278 GH1P01241 217 aa13.02□□□□□ -0.33
CHRFAM7A-206ENST00000569278 PCP11498 1178 aaKnown RBP13.02□□□□□ -0.33
CHRFAM7A-206ENST00000569278 EIF2AK2P19525 551 aaKnown RBP13.02□□□□□ -0.33
CHRFAM7A-206ENST00000569278 CHMP4BP1P59074 171 aa13.02□□□□□ -0.33
CHRFAM7A-206ENST00000569278 CNKSR3Q6P9H4 555 aa13.02□□□□□ -0.33
CHRFAM7A-206ENST00000569278 MFSD6Q6ZSS7 791 aa13.02□□□□□ -0.33
CHRFAM7A-206ENST00000569278 DGKHQ86XP1 1220 aa13.02□□□□□ -0.33
CHRFAM7A-206ENST00000569278 RETREG2Q8NC44 543 aa13.02□□□□□ -0.33
CHRFAM7A-206ENST00000569278 GPKOWQ92917 476 aaPredicted RBP eCLIP13.02□□□□□ -0.33
CHRFAM7A-206ENST00000569278 JMJD4Q9H9V9 463 aa13.02□□□□□ -0.33
CHRFAM7A-206ENST00000569278 SUGCTQ9HAC7 445 aa13.02□□□□□ -0.33
CHRFAM7A-206ENST00000569278 PXMP2Q9NR77 195 aa13.02□□□□□ -0.33
CHRFAM7A-206ENST00000569278 PNMA2Q9UL42 364 aa13.02□□□□□ -0.33
CHRFAM7A-206ENST00000569278 COG5Q9UP83 839 aa13.02□□□□□ -0.33
CHRFAM7A-206ENST00000569278 B4E1Z4 1266 aa13.01□□□□□ -0.33
CHRFAM7A-206ENST00000569278 KDM4AO75164 1064 aa13.01□□□□□ -0.33
CHRFAM7A-206ENST00000569278 HOXC8P31273 242 aa13.01□□□□□ -0.33
CHRFAM7A-206ENST00000569278 PSEN2P49810 448 aa13.01□□□□□ -0.33
CHRFAM7A-206ENST00000569278 HSD17B4P51659 736 aa13.01□□□□□ -0.33
CHRFAM7A-206ENST00000569278 ERVK-21P61565 698 aa13.01□□□□□ -0.33
CHRFAM7A-206ENST00000569278 FOXK1P85037 733 aa13.01□□□□□ -0.33
CHRFAM7A-206ENST00000569278 AAK1Q2M2I8 961 aa13.01□□□□□ -0.33
CHRFAM7A-206ENST00000569278 BRDTQ58F21 947 aaPredicted RBP13.01□□□□□ -0.33
CHRFAM7A-206ENST00000569278 ZNF618Q5T7W0 954 aa13.01□□□□□ -0.33
CHRFAM7A-206ENST00000569278 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.01□□□□□ -0.33
CHRFAM7A-206ENST00000569278 CHST3Q7LGC8 479 aa13.01□□□□□ -0.33
CHRFAM7A-206ENST00000569278 PLEKHM2Q8IWE5 1019 aa13.01□□□□□ -0.33
CHRFAM7A-206ENST00000569278 STAG2Q8N3U4 1231 aa13.01□□□□□ -0.33
CHRFAM7A-206ENST00000569278 PPTC7Q8NI37 304 aa13.01□□□□□ -0.33
CHRFAM7A-206ENST00000569278 NSUN6Q8TEA1 469 aaKnown RBP13.01□□□□□ -0.33
CHRFAM7A-206ENST00000569278 MTMR8Q96EF0 704 aa13.01□□□□□ -0.33
CHRFAM7A-206ENST00000569278 RMDN3Q96TC7 470 aa13.01□□□□□ -0.33
CHRFAM7A-206ENST00000569278 BCAS3Q9H6U6 928 aa13.01□□□□□ -0.33
CHRFAM7A-206ENST00000569278 NLRC5Q86WI3 1866 aa13.01□□□□□ -0.33
CHRFAM7A-206ENST00000569278 FAM86C2PA6NEL3 165 aa13□□□□□ -0.33
CHRFAM7A-206ENST00000569278 SDSP20132 328 aa13□□□□□ -0.33
CHRFAM7A-206ENST00000569278 SP2Q02086 613 aa13□□□□□ -0.33
CHRFAM7A-206ENST00000569278 MFSD10Q14728 455 aa13□□□□□ -0.33
CHRFAM7A-206ENST00000569278 HSDL1Q3SXM5 330 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms