RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 APPBP2Q92624 585 aa9.81□□□□□ -0.84
CDH11-216ENST00000569128 CCDC113Q9H0I3 377 aa9.81□□□□□ -0.84
CDH11-216ENST00000569128 KCNF1Q9H3M0 494 aa9.81□□□□□ -0.84
CDH11-216ENST00000569128 ZBTB40Q9NUA8 1239 aa9.81□□□□□ -0.84
CDH11-216ENST00000569128 FANCLQ9NW38 375 aa9.81□□□□□ -0.84
CDH11-216ENST00000569128 STK32BQ9NY57 414 aa9.81□□□□□ -0.84
CDH11-216ENST00000569128 MSRB2Q9Y3D2 182 aa9.81□□□□□ -0.84
CDH11-216ENST00000569128 ATP10DQ9P241 1426 aa9.81□□□□□ -0.84
CDH11-216ENST00000569128 UBN2Q6ZU65 1347 aa9.81□□□□□ -0.84
CDH11-216ENST00000569128 USP42Q9H9J4 1324 aaKnown RBP9.81□□□□□ -0.84
CDH11-216ENST00000569128 NUP98P52948 1817 aa9.8□□□□□ -0.84
CDH11-216ENST00000569128 C4AP0C0L4 1744 aa9.8□□□□□ -0.84
CDH11-216ENST00000569128 DYNC1LI2O43237 492 aaPredicted RBP9.8□□□□□ -0.84
CDH11-216ENST00000569128 ALDH1L1O75891 902 aa9.8□□□□□ -0.84
CDH11-216ENST00000569128 GSK3AP49840 483 aa9.8□□□□□ -0.84
CDH11-216ENST00000569128 NEXNQ0ZGT2 675 aa9.8□□□□□ -0.84
CDH11-216ENST00000569128 KCNMA1Q12791 1236 aa9.8□□□□□ -0.84
CDH11-216ENST00000569128 GCKRQ14397 625 aa9.8□□□□□ -0.84
CDH11-216ENST00000569128 PPP2R5EQ16537 467 aa9.8□□□□□ -0.84
CDH11-216ENST00000569128 NLRP10Q86W26 655 aa9.8□□□□□ -0.84
CDH11-216ENST00000569128 FAM20CQ8IXL6 584 aa9.8□□□□□ -0.84
CDH11-216ENST00000569128 EZH1Q92800 747 aaPredicted RBP9.8□□□□□ -0.84
CDH11-216ENST00000569128 TM9SF2Q99805 663 aa9.8□□□□□ -0.84
CDH11-216ENST00000569128 SSBP4Q9BWG4 385 aaPredicted RBP9.8□□□□□ -0.84
CDH11-216ENST00000569128 IRF2BPLQ9H1B7 796 aa9.8□□□□□ -0.84
CDH11-216ENST00000569128 CNNM2Q9H8M5 875 aa9.8□□□□□ -0.84
CDH11-216ENST00000569128 DDX19BQ9UMR2 479 aa9.8□□□□□ -0.84
CDH11-216ENST00000569128 PXDNLA1KZ92 1463 aa9.79□□□□□ -0.84
CDH11-216ENST00000569128 BCORQ6W2J9 1755 aa9.79□□□□□ -0.84
CDH11-216ENST00000569128 FAM86C2PA6NEL3 165 aa9.79□□□□□ -0.84
CDH11-216ENST00000569128 CST3P01034 146 aaPredicted RBP9.79□□□□□ -0.84
CDH11-216ENST00000569128 GYS1P13807 737 aa9.79□□□□□ -0.84
CDH11-216ENST00000569128 NME1P15531 152 aaKnown RBP9.79□□□□□ -0.84
CDH11-216ENST00000569128 RAG1P15918 1043 aa9.79□□□□□ -0.84
CDH11-216ENST00000569128 CAP2P40123 477 aa9.79□□□□□ -0.84
CDH11-216ENST00000569128 GATA4P43694 442 aa9.79□□□□□ -0.84
CDH11-216ENST00000569128 SUSD4Q5VX71 490 aa9.79□□□□□ -0.84
CDH11-216ENST00000569128 CDCP2Q5VXM1 449 aa9.79□□□□□ -0.84
CDH11-216ENST00000569128 ARMCX6Q7L4S7 300 aa9.79□□□□□ -0.84
CDH11-216ENST00000569128 HOMER1Q86YM7 354 aa9.79□□□□□ -0.84
CDH11-216ENST00000569128 SUCLG2Q96I99 432 aa9.79□□□□□ -0.84
CDH11-216ENST00000569128 FOXQ1Q9C009 403 aa9.79□□□□□ -0.84
CDH11-216ENST00000569128 TNKS2Q9H2K2 1166 aa9.79□□□□□ -0.84
CDH11-216ENST00000569128 CWC25Q9NXE8 425 aaPredicted RBP9.79□□□□□ -0.84
CDH11-216ENST00000569128 NIP7Q9Y221 180 aaKnown RBP eCLIP9.79□□□□□ -0.84
CDH11-216ENST00000569128 AFDNP55196 1824 aaKnown RBP9.78□□□□□ -0.84
CDH11-216ENST00000569128 FAM95CA0A1B0GW59 222 aa9.78□□□□□ -0.84
CDH11-216ENST00000569128 GRM8O00222 908 aa9.78□□□□□ -0.84
CDH11-216ENST00000569128 ACRP10323 421 aa9.78□□□□□ -0.84
CDH11-216ENST00000569128 GUCY2CP25092 1073 aa9.78□□□□□ -0.84
CDH11-216ENST00000569128 POLR2BP30876 1174 aaKnown RBP9.78□□□□□ -0.84
CDH11-216ENST00000569128 CASP7P55210 303 aa9.78□□□□□ -0.84
CDH11-216ENST00000569128 MAP7Q14244 749 aa9.78□□□□□ -0.84
CDH11-216ENST00000569128 NFIXQ14938 502 aa9.78□□□□□ -0.84
CDH11-216ENST00000569128 HSP90AB3PQ58FF7 597 aa9.78□□□□□ -0.84
CDH11-216ENST00000569128 TAF7LQ5H9L4 462 aa9.78□□□□□ -0.84
CDH11-216ENST00000569128 EPHA10Q5JZY3 1008 aa9.78□□□□□ -0.84
CDH11-216ENST00000569128 BEND4Q6ZU67 534 aa9.78□□□□□ -0.84
CDH11-216ENST00000569128 UBE3BQ7Z3V4 1068 aa9.78□□□□□ -0.84
CDH11-216ENST00000569128 SLFN12Q8IYM2 578 aa9.78□□□□□ -0.84
CDH11-216ENST00000569128 PHACTR4Q8IZ21 702 aa9.78□□□□□ -0.84
CDH11-216ENST00000569128 CCDC191Q8NCU4 936 aa9.78□□□□□ -0.84
CDH11-216ENST00000569128 FAM89AQ96GI7 184 aa9.78□□□□□ -0.84
CDH11-216ENST00000569128 KAZALD1Q96I82 304 aa9.78□□□□□ -0.84
CDH11-216ENST00000569128 SLC9A7Q96T83 725 aa9.78□□□□□ -0.84
CDH11-216ENST00000569128 KIF2CQ99661 725 aa9.78□□□□□ -0.84
CDH11-216ENST00000569128 DDX56Q9NY93 547 aaKnown RBP9.78□□□□□ -0.84
CDH11-216ENST00000569128 C9orf78Q9NZ63 289 aaPredicted RBP9.78□□□□□ -0.84
CDH11-216ENST00000569128 LRRFIP2Q9Y608 721 aaKnown RBP9.78□□□□□ -0.84
CDH11-216ENST00000569128 N4BP2Q86UW6 1770 aaPredicted RBP9.78□□□□□ -0.84
CDH11-216ENST00000569128 SCN7AQ01118 1682 aa9.77□□□□□ -0.84
CDH11-216ENST00000569128 CCDC85CA6NKD9 419 aa9.77□□□□□ -0.85
CDH11-216ENST00000569128 DHX15O43143 795 aaKnown RBP9.77□□□□□ -0.85
CDH11-216ENST00000569128 UBTFL1P0CB47 393 aaPredicted RBP9.77□□□□□ -0.85
CDH11-216ENST00000569128 NFKBIBQ15653 356 aa9.77□□□□□ -0.85
CDH11-216ENST00000569128 CLEC4GQ6UXB4 293 aa9.77□□□□□ -0.85
CDH11-216ENST00000569128 KIAA0907Q7Z7F0 614 aaPredicted RBP9.77□□□□□ -0.85
CDH11-216ENST00000569128 TTC6Q86TZ1 520 aa9.77□□□□□ -0.85
CDH11-216ENST00000569128 SIRT2Q8IXJ6 389 aa9.77□□□□□ -0.85
CDH11-216ENST00000569128 ACTR10Q9NZ32 417 aa9.77□□□□□ -0.85
CDH11-216ENST00000569128 ZNF652Q9Y2D9 606 aa9.77□□□□□ -0.85
CDH11-216ENST00000569128 UTYO14607 1347 aa9.77□□□□□ -0.85
CDH11-216ENST00000569128 ANKRD36CQ5JPF3 1778 aa9.76□□□□□ -0.85
CDH11-216ENST00000569128 A0A1W2PQH9 124 aa9.76□□□□□ -0.85
CDH11-216ENST00000569128 TNFRSF10CO14798 259 aa9.76□□□□□ -0.85
CDH11-216ENST00000569128 LRIG2O94898 1065 aa9.76□□□□□ -0.85
CDH11-216ENST00000569128 NTSR2O95665 410 aa9.76□□□□□ -0.85
CDH11-216ENST00000569128 IGHDP01880 384 aa9.76□□□□□ -0.85
CDH11-216ENST00000569128 GNAI2P04899 355 aa9.76□□□□□ -0.85
CDH11-216ENST00000569128 GNAI3P08754 354 aa9.76□□□□□ -0.85
CDH11-216ENST00000569128 HMGB2P26583 209 aaKnown RBP9.76□□□□□ -0.85
CDH11-216ENST00000569128 TM4SF1P30408 202 aa9.76□□□□□ -0.85
CDH11-216ENST00000569128 AMPD3Q01432 767 aa9.76□□□□□ -0.85
CDH11-216ENST00000569128 DDR1Q08345 913 aa9.76□□□□□ -0.85
CDH11-216ENST00000569128 IFRD2Q12894 506 aaPredicted RBP9.76□□□□□ -0.85
CDH11-216ENST00000569128 R3HDM1Q15032 1099 aaKnown RBP9.76□□□□□ -0.85
CDH11-216ENST00000569128 ZYXQ15942 572 aaKnown RBP9.76□□□□□ -0.85
CDH11-216ENST00000569128 TAB3Q8N5C8 712 aaPredicted RBP9.76□□□□□ -0.85
CDH11-216ENST00000569128 C19orf47Q8N9M1 422 aaKnown RBP9.76□□□□□ -0.85
CDH11-216ENST00000569128 FLAD1Q8NFF5 587 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms