RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 PDCD2LQ9BRP1 358 aa18.06■□□□□ 0.48
NME3-211ENST00000568561 MAF1Q9H063 256 aa18.06■□□□□ 0.48
NME3-211ENST00000568561 CNNM2Q9H8M5 875 aa18.06■□□□□ 0.48
NME3-211ENST00000568561 MAD2L2Q9UI95 211 aa18.06■□□□□ 0.48
NME3-211ENST00000568561 MTUS1Q9ULD2 1270 aa18.06■□□□□ 0.48
NME3-211ENST00000568561 SIP14410 1827 aa18.06■□□□□ 0.48
NME3-211ENST00000568561 MICAL3Q7RTP6 2002 aa18.05■□□□□ 0.48
NME3-211ENST00000568561 F2P00734 622 aa18.05■□□□□ 0.48
NME3-211ENST00000568561 LAMC2Q13753 1193 aa18.05■□□□□ 0.48
NME3-211ENST00000568561 FAM117BQ6P1L5 589 aa18.05■□□□□ 0.48
NME3-211ENST00000568561 CNKSR3Q6P9H4 555 aa18.05■□□□□ 0.48
NME3-211ENST00000568561 PPTC7Q8NI37 304 aa18.05■□□□□ 0.48
NME3-211ENST00000568561 GDPD5Q8WTR4 605 aa18.05■□□□□ 0.48
NME3-211ENST00000568561 GPKOWQ92917 476 aaPredicted RBP eCLIP18.05■□□□□ 0.48
NME3-211ENST00000568561 EMID1Q96A84 441 aaPredicted RBP18.05■□□□□ 0.48
NME3-211ENST00000568561 ZBED2Q9BTP6 218 aa18.05■□□□□ 0.48
NME3-211ENST00000568561 SENP2Q9HC62 589 aa18.05■□□□□ 0.48
NME3-211ENST00000568561 PCDHA1Q9Y5I3 950 aa18.05■□□□□ 0.48
NME3-211ENST00000568561 HAS3O00219 553 aa18.04■□□□□ 0.48
NME3-211ENST00000568561 ZBTB5O15062 677 aa18.04■□□□□ 0.48
NME3-211ENST00000568561 LPXNO60711 386 aa18.04■□□□□ 0.48
NME3-211ENST00000568561 GGPS1O95749 300 aa18.04■□□□□ 0.48
NME3-211ENST00000568561 CXCL10P02778 98 aa18.04■□□□□ 0.48
NME3-211ENST00000568561 POU3F3P20264 500 aaPredicted RBP18.04■□□□□ 0.48
NME3-211ENST00000568561 RBL2Q08999 1139 aa18.04■□□□□ 0.48
NME3-211ENST00000568561 MBTPS1Q14703 1052 aa18.04■□□□□ 0.48
NME3-211ENST00000568561 TRIM71Q2Q1W2 868 aaKnown RBP18.04■□□□□ 0.48
NME3-211ENST00000568561 HSDL1Q3SXM5 330 aa18.04■□□□□ 0.48
NME3-211ENST00000568561 TRAF7Q6Q0C0 670 aa18.04■□□□□ 0.48
NME3-211ENST00000568561 MTMR8Q96EF0 704 aa18.04■□□□□ 0.48
NME3-211ENST00000568561 PIGSQ96S52 555 aa18.04■□□□□ 0.48
NME3-211ENST00000568561 KATNAL1Q9BW62 490 aa18.04■□□□□ 0.48
NME3-211ENST00000568561 PALM3A6NDB9 673 aaPredicted RBP18.03■□□□□ 0.48
NME3-211ENST00000568561 GSPT1P15170 499 aaKnown RBP18.03■□□□□ 0.48
NME3-211ENST00000568561 UBA1P22314 1058 aaKnown RBP18.03■□□□□ 0.48
NME3-211ENST00000568561 PDE4AP27815 886 aa18.03■□□□□ 0.48
NME3-211ENST00000568561 SP2Q02086 613 aa18.03■□□□□ 0.48
NME3-211ENST00000568561 GHRHRQ02643 423 aa18.03■□□□□ 0.48
NME3-211ENST00000568561 PGM5Q15124 567 aa18.03■□□□□ 0.48
NME3-211ENST00000568561 ZNF618Q5T7W0 954 aa18.03■□□□□ 0.48
NME3-211ENST00000568561 MYSM1Q5VVJ2 828 aa18.03■□□□□ 0.48
NME3-211ENST00000568561 FCHSD1Q86WN1 690 aa18.03■□□□□ 0.48
NME3-211ENST00000568561 SPATA33Q96N06 139 aa18.03■□□□□ 0.48
NME3-211ENST00000568561 TAF6LQ9Y6J9 622 aa18.03■□□□□ 0.48
NME3-211ENST00000568561 PTK7Q13308 1070 aa18.02■□□□□ 0.48
NME3-211ENST00000568561 GRM4Q14833 912 aa18.02■□□□□ 0.48
NME3-211ENST00000568561 CELF3Q5SZQ8 465 aaKnown RBP18.02■□□□□ 0.48
NME3-211ENST00000568561 STOX1Q6ZVD7 989 aa18.02■□□□□ 0.48
NME3-211ENST00000568561 BCAS3Q9H6U6 928 aa18.02■□□□□ 0.48
NME3-211ENST00000568561 HOXD8P13378 290 aaPredicted RBP18.01■□□□□ 0.47
NME3-211ENST00000568561 AAK1Q2M2I8 961 aa18.01■□□□□ 0.47
NME3-211ENST00000568561 VSIG10LQ86VR7 867 aa18.01■□□□□ 0.47
NME3-211ENST00000568561 PIBF1Q8WXW3 757 aa18.01■□□□□ 0.47
NME3-211ENST00000568561 IFIT3O14879 490 aaKnown RBP18■□□□□ 0.47
NME3-211ENST00000568561 CYTH3O43739 400 aa18■□□□□ 0.47
NME3-211ENST00000568561 GJB5O95377 273 aa18■□□□□ 0.47
NME3-211ENST00000568561 CYP21A2P08686 494 aa18■□□□□ 0.47
NME3-211ENST00000568561 CCND2P30279 289 aa18■□□□□ 0.47
NME3-211ENST00000568561 PTH1RQ03431 593 aa18■□□□□ 0.47
NME3-211ENST00000568561 TTC22Q5TAA0 569 aa18■□□□□ 0.47
NME3-211ENST00000568561 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18■□□□□ 0.47
NME3-211ENST00000568561 C16orf70Q9BSU1 422 aa18■□□□□ 0.47
NME3-211ENST00000568561 ABHD14A-ACY1A0A1B0GW23 586 aa17.99■□□□□ 0.47
NME3-211ENST00000568561 LINC01553A4QN01 128 aa17.99■□□□□ 0.47
NME3-211ENST00000568561 GCOM1H8Y6P7 765 aaPredicted RBP17.99■□□□□ 0.47
NME3-211ENST00000568561 PPFIA4O75335 1185 aa17.99■□□□□ 0.47
NME3-211ENST00000568561 LGR5O75473 907 aa17.99■□□□□ 0.47
NME3-211ENST00000568561 PARNO95453 639 aaKnown RBP17.99■□□□□ 0.47
NME3-211ENST00000568561 POLR2MP0CAP2 368 aa17.99■□□□□ 0.47
NME3-211ENST00000568561 THPOP40225 353 aa17.99■□□□□ 0.47
NME3-211ENST00000568561 TRDNQ13061 729 aa17.99■□□□□ 0.47
NME3-211ENST00000568561 IKBKEQ14164 716 aa17.99■□□□□ 0.47
NME3-211ENST00000568561 RIOX1Q9H6W3 641 aa17.99■□□□□ 0.47
NME3-211ENST00000568561 MLXIPQ9HAP2 919 aa17.99■□□□□ 0.47
NME3-211ENST00000568561 COG5Q9UP83 839 aa17.99■□□□□ 0.47
NME3-211ENST00000568561 LGALS2P05162 132 aa17.98■□□□□ 0.47
NME3-211ENST00000568561 CTSHP09668 335 aa17.98■□□□□ 0.47
NME3-211ENST00000568561 KCNV1Q6PIU1 500 aa17.98■□□□□ 0.47
NME3-211ENST00000568561 SERINC5Q86VE9 423 aa17.98■□□□□ 0.47
NME3-211ENST00000568561 HLA-CQ95604 372 aa17.98■□□□□ 0.47
NME3-211ENST00000568561 RAD9AQ99638 391 aa17.98■□□□□ 0.47
NME3-211ENST00000568561 OSBPL7Q9BZF2 842 aa17.98■□□□□ 0.47
NME3-211ENST00000568561 SUGCTQ9HAC7 445 aa17.98■□□□□ 0.47
NME3-211ENST00000568561 MAP3K20Q9NYL2 800 aaKnown RBP17.98■□□□□ 0.47
NME3-211ENST00000568561 TELO2Q9Y4R8 837 aa17.98■□□□□ 0.47
NME3-211ENST00000568561 NLRC5Q86WI3 1866 aa17.98■□□□□ 0.47
NME3-211ENST00000568561 RSPH10B2B2RC85 870 aa17.97■□□□□ 0.47
NME3-211ENST00000568561 RSPH10BP0C881 870 aa17.97■□□□□ 0.47
NME3-211ENST00000568561 SMIM10L2AP0DMW4 78 aa17.97■□□□□ 0.47
NME3-211ENST00000568561 SMIM10L2BP0DMW5 78 aa17.97■□□□□ 0.47
NME3-211ENST00000568561 MRPS9P82933 396 aaKnown RBP17.97■□□□□ 0.47
NME3-211ENST00000568561 TROAPQ12815 778 aa17.97■□□□□ 0.47
NME3-211ENST00000568561 WTAPQ15007 396 aa17.97■□□□□ 0.47
NME3-211ENST00000568561 RALYLQ86SE5 291 aaKnown RBP17.97■□□□□ 0.47
NME3-211ENST00000568561 TRIM50Q86XT4 487 aa17.97■□□□□ 0.47
NME3-211ENST00000568561 MYOCDQ8IZQ8 938 aa17.97■□□□□ 0.47
NME3-211ENST00000568561 DBF4BQ8NFT6 615 aa17.97■□□□□ 0.47
NME3-211ENST00000568561 ATP6V0A1Q93050 837 aa17.97■□□□□ 0.47
NME3-211ENST00000568561 TGS1Q96RS0 853 aaKnown RBP17.97■□□□□ 0.47
NME3-211ENST00000568561 C17orf80Q9BSJ5 609 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms