RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 F2P00734 622 aa16.61■□□□□ 0.25
CMTM3-215ENST00000568477 ZNF286BP0CG31 522 aa16.61■□□□□ 0.25
CMTM3-215ENST00000568477 HOXD8P13378 290 aaPredicted RBP16.61■□□□□ 0.25
CMTM3-215ENST00000568477 ICAM3P32942 547 aa16.61■□□□□ 0.25
CMTM3-215ENST00000568477 PSEN2P49810 448 aa16.61■□□□□ 0.25
CMTM3-215ENST00000568477 FGD1P98174 961 aa16.61■□□□□ 0.25
CMTM3-215ENST00000568477 PTGISQ16647 500 aa16.61■□□□□ 0.25
CMTM3-215ENST00000568477 PCNX4Q63HM2 1172 aa16.61■□□□□ 0.25
CMTM3-215ENST00000568477 XRRA1Q6P2D8 792 aa16.61■□□□□ 0.25
CMTM3-215ENST00000568477 HEATR3Q7Z4Q2 680 aa16.61■□□□□ 0.25
CMTM3-215ENST00000568477 SESTD1Q86VW0 696 aa16.61■□□□□ 0.25
CMTM3-215ENST00000568477 RETREG2Q8NC44 543 aa16.61■□□□□ 0.25
CMTM3-215ENST00000568477 HERVK_113Q902F9 699 aa16.61■□□□□ 0.25
CMTM3-215ENST00000568477 GPKOWQ92917 476 aaPredicted RBP eCLIP16.61■□□□□ 0.25
CMTM3-215ENST00000568477 KCNB2Q92953 911 aa16.61■□□□□ 0.25
CMTM3-215ENST00000568477 GUCD1Q96NT3 240 aa16.61■□□□□ 0.25
CMTM3-215ENST00000568477 MLXIPQ9HAP2 919 aa16.61■□□□□ 0.25
CMTM3-215ENST00000568477 CNTNAP5Q8WYK1 1306 aa16.61■□□□□ 0.25
CMTM3-215ENST00000568477 GOLGA8AA7E2F4 631 aa16.6■□□□□ 0.25
CMTM3-215ENST00000568477 GOLGA8BA8MQT2 603 aa16.6■□□□□ 0.25
CMTM3-215ENST00000568477 PITPNM1O00562 1244 aa16.6■□□□□ 0.25
CMTM3-215ENST00000568477 FIBPO43427 364 aa16.6■□□□□ 0.25
CMTM3-215ENST00000568477 PFKMP08237 780 aa16.6■□□□□ 0.25
CMTM3-215ENST00000568477 HSPA4P34932 840 aa16.6■□□□□ 0.25
CMTM3-215ENST00000568477 RCAN1P53805 252 aa16.6■□□□□ 0.25
CMTM3-215ENST00000568477 SP2Q02086 613 aa16.6■□□□□ 0.25
CMTM3-215ENST00000568477 BFSP2Q13515 415 aa16.6■□□□□ 0.25
CMTM3-215ENST00000568477 MFSD10Q14728 455 aa16.6■□□□□ 0.25
CMTM3-215ENST00000568477 HSDL1Q3SXM5 330 aa16.6■□□□□ 0.25
CMTM3-215ENST00000568477 CCDC155Q8N6L0 562 aa16.6■□□□□ 0.25
CMTM3-215ENST00000568477 C7orf31Q8N865 590 aa16.6■□□□□ 0.25
CMTM3-215ENST00000568477 JAKMIP1Q96N16 626 aaKnown RBP16.6■□□□□ 0.25
CMTM3-215ENST00000568477 ALG1Q9BT22 464 aa16.6■□□□□ 0.25
CMTM3-215ENST00000568477 SEMA6BQ9H3T3 888 aa16.6■□□□□ 0.25
CMTM3-215ENST00000568477 RTEL1Q9NZ71 1219 aa16.6■□□□□ 0.25
CMTM3-215ENST00000568477 NAP1L2Q9ULW6 460 aaPredicted RBP16.6■□□□□ 0.25
CMTM3-215ENST00000568477 MYH7BA7E2Y1 1941 aa16.59■□□□□ 0.25
CMTM3-215ENST00000568477 SPATA31C2B4DYI2 1134 aa16.59■□□□□ 0.25
CMTM3-215ENST00000568477 DNAJB2P25686 324 aa16.59■□□□□ 0.25
CMTM3-215ENST00000568477 RFC2P35250 354 aa16.59■□□□□ 0.25
CMTM3-215ENST00000568477 NEDD9Q14511 834 aa16.59■□□□□ 0.25
CMTM3-215ENST00000568477 KIAA0753Q2KHM9 967 aa16.59■□□□□ 0.25
CMTM3-215ENST00000568477 GDF6Q6KF10 455 aaPredicted RBP16.59■□□□□ 0.25
CMTM3-215ENST00000568477 BLOC1S2Q6QNY1 142 aa16.59■□□□□ 0.25
CMTM3-215ENST00000568477 OTOP2Q7RTS6 562 aa16.59■□□□□ 0.25
CMTM3-215ENST00000568477 NLRX1Q86UT6 975 aa16.59■□□□□ 0.25
CMTM3-215ENST00000568477 TTYH1Q9H313 450 aaPredicted RBP16.59■□□□□ 0.25
CMTM3-215ENST00000568477 HDAC6Q9UBN7 1215 aa16.59■□□□□ 0.25
CMTM3-215ENST00000568477 GTF2IRD1Q9UHL9 959 aa16.59■□□□□ 0.25
CMTM3-215ENST00000568477 SNX14Q9Y5W7 946 aa16.59■□□□□ 0.25
CMTM3-215ENST00000568477 SPDYE3A6NKU9 549 aa16.58■□□□□ 0.24
CMTM3-215ENST00000568477 HAS3O00219 553 aa16.58■□□□□ 0.24
CMTM3-215ENST00000568477 NOP56O00567 594 aaKnown RBP16.58■□□□□ 0.24
CMTM3-215ENST00000568477 CPA1P15085 419 aa16.58■□□□□ 0.24
CMTM3-215ENST00000568477 FUT2Q10981 343 aa16.58■□□□□ 0.24
CMTM3-215ENST00000568477 SEMA3FQ13275 785 aa16.58■□□□□ 0.24
CMTM3-215ENST00000568477 UBE2SQ16763 222 aa16.58■□□□□ 0.24
CMTM3-215ENST00000568477 WWC2Q6AWC2 1192 aa16.58■□□□□ 0.24
CMTM3-215ENST00000568477 PPP1R18Q6NYC8 613 aa16.58■□□□□ 0.24
CMTM3-215ENST00000568477 METTL7BQ6UX53 244 aa16.58■□□□□ 0.24
CMTM3-215ENST00000568477 CAGE1Q8TC20 777 aa16.58■□□□□ 0.24
CMTM3-215ENST00000568477 CXXC1Q9P0U4 656 aaPredicted RBP16.58■□□□□ 0.24
CMTM3-215ENST00000568477 ZBBXA8MT70 800 aa16.57■□□□□ 0.24
CMTM3-215ENST00000568477 GRXCR1A8MXD5 290 aa16.57■□□□□ 0.24
CMTM3-215ENST00000568477 NAPAP54920 295 aa16.57■□□□□ 0.24
CMTM3-215ENST00000568477 Q6ZUG5 572 aa16.57■□□□□ 0.24
CMTM3-215ENST00000568477 DEFB128Q7Z7B8 93 aa16.57■□□□□ 0.24
CMTM3-215ENST00000568477 AFAP1L1Q8TED9 768 aa16.57■□□□□ 0.24
CMTM3-215ENST00000568477 TIFAQ96CG3 184 aa16.57■□□□□ 0.24
CMTM3-215ENST00000568477 VWCEQ96DN2 955 aa16.57■□□□□ 0.24
CMTM3-215ENST00000568477 CTAGE1Q96RT6 745 aa16.57■□□□□ 0.24
CMTM3-215ENST00000568477 CDX2Q99626 313 aaPredicted RBP16.57■□□□□ 0.24
CMTM3-215ENST00000568477 EHMT1Q9H9B1 1298 aa16.57■□□□□ 0.24
CMTM3-215ENST00000568477 V9GY48 417 aaPredicted RBP16.57■□□□□ 0.24
CMTM3-215ENST00000568477 CCDC196A0A1B0GTZ2 297 aa16.56■□□□□ 0.24
CMTM3-215ENST00000568477 hCG_1984214I3L0E3 225 aa16.56■□□□□ 0.24
CMTM3-215ENST00000568477 LGALS2P05162 132 aa16.56■□□□□ 0.24
CMTM3-215ENST00000568477 IQCF3P0C7M6 154 aa16.56■□□□□ 0.24
CMTM3-215ENST00000568477 ACTN1P12814 892 aa16.56■□□□□ 0.24
CMTM3-215ENST00000568477 RPS6KB1P23443 525 aa16.56■□□□□ 0.24
CMTM3-215ENST00000568477 PSMA5P28066 241 aa16.56■□□□□ 0.24
CMTM3-215ENST00000568477 CDC27P30260 824 aa16.56■□□□□ 0.24
CMTM3-215ENST00000568477 METAP2P50579 478 aaKnown RBP eCLIP16.56■□□□□ 0.24
CMTM3-215ENST00000568477 APOBRQ0VD83 1088 aa16.56■□□□□ 0.24
CMTM3-215ENST00000568477 RAB30Q15771 203 aa16.56■□□□□ 0.24
CMTM3-215ENST00000568477 CYFIP1Q7L576 1253 aa16.56■□□□□ 0.24
CMTM3-215ENST00000568477 TEX2Q8IWB9 1127 aa16.56■□□□□ 0.24
CMTM3-215ENST00000568477 ZNF713Q8N859 430 aaPredicted RBP16.56■□□□□ 0.24
CMTM3-215ENST00000568477 GIMAP8Q8ND71 665 aaPredicted RBP16.56■□□□□ 0.24
CMTM3-215ENST00000568477 BRF1Q92994 677 aa16.56■□□□□ 0.24
CMTM3-215ENST00000568477 GPRASP2Q96D09 838 aa16.56■□□□□ 0.24
CMTM3-215ENST00000568477 CDHR1Q96JP9 859 aa16.56■□□□□ 0.24
CMTM3-215ENST00000568477 SENP7Q9BQF6 1050 aa16.56■□□□□ 0.24
CMTM3-215ENST00000568477 C16orf70Q9BSU1 422 aa16.56■□□□□ 0.24
CMTM3-215ENST00000568477 PBX4Q9BYU1 374 aa16.56■□□□□ 0.24
CMTM3-215ENST00000568477 BCAS3Q9H6U6 928 aa16.56■□□□□ 0.24
CMTM3-215ENST00000568477 FAM217BQ9NTX9 383 aaPredicted RBP16.56■□□□□ 0.24
CMTM3-215ENST00000568477 PCDHA6Q9UN73 950 aa16.56■□□□□ 0.24
CMTM3-215ENST00000568477 PCDHA8Q9Y5H6 950 aa16.56■□□□□ 0.24
CMTM3-215ENST00000568477 SLC4A7Q9Y6M7 1214 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms