RNA–Protein interactions for RNA: ENST00000568169.5

TCF4-238, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-238	ENST00000568169	INSL6	Q9Y581	213 aa		13.31	□□□□□ -0.28
TCF4-238	ENST00000568169	CCDC171	Q6TFL3	1326 aa		13.31	□□□□□ -0.28
TCF4-238	ENST00000568169	ZNF318	Q5VUA4	2279 aa		13.3	□□□□□ -0.28
TCF4-238	ENST00000568169	RBAK-RBAKDN	I3L0D1	243 aa		13.3	□□□□□ -0.28
TCF4-238	ENST00000568169	PPFIA4	O75335	1185 aa		13.3	□□□□□ -0.28
TCF4-238	ENST00000568169	LGR5	O75473	907 aa		13.3	□□□□□ -0.28
TCF4-238	ENST00000568169	NR3C2	P08235	984 aa		13.3	□□□□□ -0.28
TCF4-238	ENST00000568169	ZNF286B	P0CG31	522 aa		13.3	□□□□□ -0.28
TCF4-238	ENST00000568169	KCNA5	P22460	613 aa		13.3	□□□□□ -0.28
TCF4-238	ENST00000568169	ZNF200	P98182	395 aa	Predicted RBP	13.3	□□□□□ -0.28
TCF4-238	ENST00000568169	QRICH1	Q2TAL8	776 aa		13.3	□□□□□ -0.28
TCF4-238	ENST00000568169	ARHGEF16	Q5VV41	709 aa		13.3	□□□□□ -0.28
TCF4-238	ENST00000568169	FAM117B	Q6P1L5	589 aa		13.3	□□□□□ -0.28
TCF4-238	ENST00000568169	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	13.3	□□□□□ -0.28
TCF4-238	ENST00000568169	GJD3	Q8N144	294 aa		13.3	□□□□□ -0.28
TCF4-238	ENST00000568169	PNMA1	Q8ND90	353 aa		13.3	□□□□□ -0.28
TCF4-238	ENST00000568169	CRBN	Q96SW2	442 aa		13.3	□□□□□ -0.28
TCF4-238	ENST00000568169	MRPL11	Q9Y3B7	192 aa	Known RBP	13.3	□□□□□ -0.28
TCF4-238	ENST00000568169	NEDD4	P46934	1319 aa		13.3	□□□□□ -0.28
TCF4-238	ENST00000568169	PRR33	A8MZF0	331 aa		13.29	□□□□□ -0.28
TCF4-238	ENST00000568169	EIF2AK2	P19525	551 aa	Known RBP	13.29	□□□□□ -0.28
TCF4-238	ENST00000568169	NT5C2	P49902	561 aa		13.29	□□□□□ -0.28
TCF4-238	ENST00000568169	HTRA4	P83105	476 aa	Predicted RBP	13.29	□□□□□ -0.28
TCF4-238	ENST00000568169	GHRHR	Q02643	423 aa		13.29	□□□□□ -0.28
TCF4-238	ENST00000568169	HIC1	Q14526	733 aa		13.29	□□□□□ -0.28
TCF4-238	ENST00000568169	ASPRV1	Q53RT3	343 aa		13.29	□□□□□ -0.28
TCF4-238	ENST00000568169	CCDC178	Q5BJE1	867 aa		13.29	□□□□□ -0.28
TCF4-238	ENST00000568169	FBXO11	Q86XK2	927 aa		13.29	□□□□□ -0.28
TCF4-238	ENST00000568169	DHX37	Q8IY37	1157 aa	Known RBP	13.29	□□□□□ -0.28
TCF4-238	ENST00000568169	FBXO22	Q8NEZ5	403 aa		13.29	□□□□□ -0.28
TCF4-238	ENST00000568169	DBF4B	Q8NFT6	615 aa		13.29	□□□□□ -0.28
TCF4-238	ENST00000568169	SP7	Q8TDD2	431 aa	Predicted RBP	13.29	□□□□□ -0.28
TCF4-238	ENST00000568169	C17orf80	Q9BSJ5	609 aa		13.29	□□□□□ -0.28
TCF4-238	ENST00000568169	PXMP2	Q9NR77	195 aa		13.29	□□□□□ -0.28
TCF4-238	ENST00000568169	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.29	□□□□□ -0.28
TCF4-238	ENST00000568169	MRVI1	Q9Y6F6	885 aa		13.29	□□□□□ -0.28
TCF4-238	ENST00000568169	EMSY	Q7Z589	1322 aa		13.29	□□□□□ -0.28
TCF4-238	ENST00000568169	XIRP2	A4UGR9	3374 aa		13.28	□□□□□ -0.28
TCF4-238	ENST00000568169	GRXCR2	A6NFK2	248 aa		13.28	□□□□□ -0.28
TCF4-238	ENST00000568169	OPLAH	O14841	1288 aa		13.28	□□□□□ -0.28
TCF4-238	ENST00000568169	RGS20	O76081	388 aa		13.28	□□□□□ -0.28
TCF4-238	ENST00000568169	AMH	P03971	560 aa		13.28	□□□□□ -0.28
TCF4-238	ENST00000568169	IL9	P15248	144 aa		13.28	□□□□□ -0.28
TCF4-238	ENST00000568169	HSD17B4	P51659	736 aa		13.28	□□□□□ -0.28
TCF4-238	ENST00000568169	PLEKHG4	Q58EX7	1191 aa		13.28	□□□□□ -0.28
TCF4-238	ENST00000568169	MYSM1	Q5VVJ2	828 aa		13.28	□□□□□ -0.28
TCF4-238	ENST00000568169	PTCRA	Q6ISU1	281 aa	Predicted RBP	13.28	□□□□□ -0.28
TCF4-238	ENST00000568169	SERINC5	Q86VE9	423 aa		13.28	□□□□□ -0.28
TCF4-238	ENST00000568169	IQCA1	Q86XH1	822 aa		13.28	□□□□□ -0.28
TCF4-238	ENST00000568169	MRPL38	Q96DV4	380 aa	Known RBP	13.28	□□□□□ -0.28
TCF4-238	ENST00000568169	KAT14	Q9H8E8	782 aa		13.28	□□□□□ -0.28
TCF4-238	ENST00000568169	JMJD4	Q9H9V9	463 aa		13.28	□□□□□ -0.28
TCF4-238	ENST00000568169	RSPH10B2	B2RC85	870 aa		13.27	□□□□□ -0.29
TCF4-238	ENST00000568169	KDM4A	O75164	1064 aa		13.27	□□□□□ -0.29
TCF4-238	ENST00000568169	CFB	P00751	764 aa		13.27	□□□□□ -0.29
TCF4-238	ENST00000568169	RSPH10B	P0C881	870 aa		13.27	□□□□□ -0.29
TCF4-238	ENST00000568169	PUS10	Q3MIT2	529 aa	Known RBP	13.27	□□□□□ -0.29
TCF4-238	ENST00000568169	HSDL1	Q3SXM5	330 aa		13.27	□□□□□ -0.29
TCF4-238	ENST00000568169	CELF3	Q5SZQ8	465 aa	Known RBP	13.27	□□□□□ -0.29
TCF4-238	ENST00000568169	KCNV1	Q6PIU1	500 aa		13.27	□□□□□ -0.29
TCF4-238	ENST00000568169	MYOCD	Q8IZQ8	938 aa		13.27	□□□□□ -0.29
TCF4-238	ENST00000568169	NEK9	Q8TD19	979 aa		13.27	□□□□□ -0.29
TCF4-238	ENST00000568169	SAMD11	Q96NU1	681 aa		13.27	□□□□□ -0.29
TCF4-238	ENST00000568169	PDCD2L	Q9BRP1	358 aa		13.27	□□□□□ -0.29
TCF4-238	ENST00000568169	C16orf70	Q9BSU1	422 aa		13.27	□□□□□ -0.29
TCF4-238	ENST00000568169	VAT1L	Q9HCJ6	419 aa		13.27	□□□□□ -0.29
TCF4-238	ENST00000568169	MAP3K20	Q9NYL2	800 aa	Known RBP	13.27	□□□□□ -0.29
TCF4-238	ENST00000568169	CTNNA3	Q9UI47	895 aa		13.27	□□□□□ -0.29
TCF4-238	ENST00000568169	SSUH2	Q9Y2M2	353 aa		13.27	□□□□□ -0.29
TCF4-238	ENST00000568169	COL4A6	Q14031	1691 aa		13.27	□□□□□ -0.29
TCF4-238	ENST00000568169	TTC3	P53804	2025 aa		13.27	□□□□□ -0.29
TCF4-238	ENST00000568169	ZNF213	O14771	459 aa		13.26	□□□□□ -0.29
TCF4-238	ENST00000568169	DHX16	O60231	1041 aa	Known RBP	13.26	□□□□□ -0.29
TCF4-238	ENST00000568169	PARP1	P09874	1014 aa	Known RBP	13.26	□□□□□ -0.29
TCF4-238	ENST00000568169	ALAD	P13716	330 aa		13.26	□□□□□ -0.29
TCF4-238	ENST00000568169	HOXC8	P31273	242 aa		13.26	□□□□□ -0.29
TCF4-238	ENST00000568169	SSTR3	P32745	418 aa	Predicted RBP	13.26	□□□□□ -0.29
TCF4-238	ENST00000568169	THPO	P40225	353 aa		13.26	□□□□□ -0.29
TCF4-238	ENST00000568169	MFAP1	P55081	439 aa	Known RBP	13.26	□□□□□ -0.29
TCF4-238	ENST00000568169	COL19A1	Q14993	1142 aa		13.26	□□□□□ -0.29
TCF4-238	ENST00000568169	PTPRO	Q16827	1216 aa		13.26	□□□□□ -0.29
TCF4-238	ENST00000568169	EPC2	Q52LR7	807 aa		13.26	□□□□□ -0.29
TCF4-238	ENST00000568169	STOX1	Q6ZVD7	989 aa		13.26	□□□□□ -0.29
TCF4-238	ENST00000568169	VSIG10L	Q86VR7	867 aa		13.26	□□□□□ -0.29
TCF4-238	ENST00000568169	LOXHD1	Q8IVV2	1947 aa		13.26	□□□□□ -0.29
TCF4-238	ENST00000568169	ENAH	Q8N8S7	591 aa	Predicted RBP	13.26	□□□□□ -0.29
TCF4-238	ENST00000568169	SPATA33	Q96N06	139 aa		13.26	□□□□□ -0.29
TCF4-238	ENST00000568169	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	13.26	□□□□□ -0.29
TCF4-238	ENST00000568169	AMN	Q9BXJ7	453 aa		13.26	□□□□□ -0.29
TCF4-238	ENST00000568169	ZSWIM5	Q9P217	1185 aa		13.26	□□□□□ -0.29
TCF4-238	ENST00000568169	POTEB3	A0JP26	581 aa		13.25	□□□□□ -0.29
TCF4-238	ENST00000568169		B4E1Z4	1266 aa		13.25	□□□□□ -0.29
TCF4-238	ENST00000568169		H3BNC9	293 aa		13.25	□□□□□ -0.29
TCF4-238	ENST00000568169	GGPS1	O95749	300 aa		13.25	□□□□□ -0.29
TCF4-238	ENST00000568169	TGFB3	P10600	412 aa		13.25	□□□□□ -0.29
TCF4-238	ENST00000568169	MYCL	P12524	364 aa	Predicted RBP	13.25	□□□□□ -0.29
TCF4-238	ENST00000568169	SDS	P20132	328 aa		13.25	□□□□□ -0.29
TCF4-238	ENST00000568169	SP2	Q02086	613 aa		13.25	□□□□□ -0.29
TCF4-238	ENST00000568169	TIGD5	Q53EQ6	642 aa		13.25	□□□□□ -0.29
TCF4-238	ENST00000568169	POTEB	Q6S5H4	581 aa		13.25	□□□□□ -0.29

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