RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 KRTAP4-6Q9BYQ5 205 aa7.21□□□□□ -1.26
CAPN3-218ENST00000568153 CRNKL1Q9BZJ0 848 aaKnown RBP7.21□□□□□ -1.26
CAPN3-218ENST00000568153 ATP8A2Q9NTI2 1148 aa7.21□□□□□ -1.26
CAPN3-218ENST00000568153 GPN3Q9UHW5 284 aaPredicted RBP7.21□□□□□ -1.26
CAPN3-218ENST00000568153 PPM1HQ9ULR3 514 aa7.21□□□□□ -1.26
CAPN3-218ENST00000568153 SMC3Q9UQE7 1217 aa7.21□□□□□ -1.26
CAPN3-218ENST00000568153 SCN7AQ01118 1682 aa7.21□□□□□ -1.26
CAPN3-218ENST00000568153 TAF1LQ8IZX4 1826 aa7.2□□□□□ -1.26
CAPN3-218ENST00000568153 A0A0G2JLW4 131 aa7.2□□□□□ -1.26
CAPN3-218ENST00000568153 DYRK3O43781 588 aa7.2□□□□□ -1.26
CAPN3-218ENST00000568153 PRDX5P30044 214 aa7.2□□□□□ -1.26
CAPN3-218ENST00000568153 CHRNA5P30532 468 aa7.2□□□□□ -1.26
CAPN3-218ENST00000568153 DYNLL1P63167 89 aaKnown RBP7.2□□□□□ -1.26
CAPN3-218ENST00000568153 MRPL58Q14197 206 aaKnown RBP7.2□□□□□ -1.26
CAPN3-218ENST00000568153 AKNAD1Q5T1N1 836 aa7.2□□□□□ -1.26
CAPN3-218ENST00000568153 MEI1Q5TIA1 1274 aa7.2□□□□□ -1.26
CAPN3-218ENST00000568153 Q6ZS46 218 aa7.2□□□□□ -1.26
CAPN3-218ENST00000568153 ADGRA1Q86SQ6 560 aa7.2□□□□□ -1.26
CAPN3-218ENST00000568153 CERS3Q8IU89 383 aa7.2□□□□□ -1.26
CAPN3-218ENST00000568153 CCDC83Q8IWF9 413 aa7.2□□□□□ -1.26
CAPN3-218ENST00000568153 TTLL6Q8N841 843 aa7.2□□□□□ -1.26
CAPN3-218ENST00000568153 NECAB1Q8N987 351 aa7.2□□□□□ -1.26
CAPN3-218ENST00000568153 SUPT20HQ8NEM7 779 aa7.2□□□□□ -1.26
CAPN3-218ENST00000568153 TNPO1Q92973 898 aaKnown RBP7.2□□□□□ -1.26
CAPN3-218ENST00000568153 ZNF274Q96GC6 653 aaPredicted RBP7.2□□□□□ -1.26
CAPN3-218ENST00000568153 MEGF10Q96KG7 1140 aa7.2□□□□□ -1.26
CAPN3-218ENST00000568153 TCEANC2Q96MN5 208 aa7.2□□□□□ -1.26
CAPN3-218ENST00000568153 GBP4Q96PP9 640 aa7.2□□□□□ -1.26
CAPN3-218ENST00000568153 RIOK1Q9BRS2 568 aaKnown RBP7.2□□□□□ -1.26
CAPN3-218ENST00000568153 KRT23Q9C075 422 aa7.2□□□□□ -1.26
CAPN3-218ENST00000568153 PDGFDQ9GZP0 370 aaPredicted RBP7.2□□□□□ -1.26
CAPN3-218ENST00000568153 SEMA6BQ9H3T3 888 aa7.2□□□□□ -1.26
CAPN3-218ENST00000568153 RNF41Q9H4P4 317 aaPredicted RBP7.2□□□□□ -1.26
CAPN3-218ENST00000568153 CNNM2Q9H8M5 875 aa7.2□□□□□ -1.26
CAPN3-218ENST00000568153 AKTIPQ9H8T0 292 aa7.2□□□□□ -1.26
CAPN3-218ENST00000568153 VTI1BQ9UEU0 232 aa7.2□□□□□ -1.26
CAPN3-218ENST00000568153 JAG2Q9Y219 1238 aa7.2□□□□□ -1.26
CAPN3-218ENST00000568153 SUGT1Q9Y2Z0 365 aa7.2□□□□□ -1.26
CAPN3-218ENST00000568153 DDX60Q8IY21 1712 aaKnown RBP7.2□□□□□ -1.26
CAPN3-218ENST00000568153 ZMYM6O95789 1325 aa7.2□□□□□ -1.26
CAPN3-218ENST00000568153 FAM205AQ6ZU69 1335 aa7.2□□□□□ -1.26
CAPN3-218ENST00000568153 LRP5O75197 1615 aa7.19□□□□□ -1.26
CAPN3-218ENST00000568153 MINDY4BA8MYZ0 360 aa7.19□□□□□ -1.26
CAPN3-218ENST00000568153 PRC1O43663 620 aa7.19□□□□□ -1.26
CAPN3-218ENST00000568153 PFKFB2O60825 505 aa7.19□□□□□ -1.26
CAPN3-218ENST00000568153 ALX3O95076 343 aa7.19□□□□□ -1.26
CAPN3-218ENST00000568153 SLC3A2P08195 630 aaKnown RBP7.19□□□□□ -1.26
CAPN3-218ENST00000568153 H2AFB1P0C5Y9 115 aa7.19□□□□□ -1.26
CAPN3-218ENST00000568153 H2AFB2P0C5Z0 115 aa7.19□□□□□ -1.26
CAPN3-218ENST00000568153 PTMSP20962 102 aa7.19□□□□□ -1.26
CAPN3-218ENST00000568153 POLD1P28340 1107 aa7.19□□□□□ -1.26
CAPN3-218ENST00000568153 MCM4P33991 863 aa7.19□□□□□ -1.26
CAPN3-218ENST00000568153 TGFB2P61812 414 aa7.19□□□□□ -1.26
CAPN3-218ENST00000568153 OLFM4Q6UX06 510 aa7.19□□□□□ -1.26
CAPN3-218ENST00000568153 CHST3Q7LGC8 479 aa7.19□□□□□ -1.26
CAPN3-218ENST00000568153 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.19□□□□□ -1.26
CAPN3-218ENST00000568153 SLC51AQ86UW1 340 aa7.19□□□□□ -1.26
CAPN3-218ENST00000568153 RTKN2Q8IZC4 609 aa7.19□□□□□ -1.26
CAPN3-218ENST00000568153 TMTC2Q8N394 836 aa7.19□□□□□ -1.26
CAPN3-218ENST00000568153 ZNF384Q8TF68 577 aa7.19□□□□□ -1.26
CAPN3-218ENST00000568153 BRF1Q92994 677 aa7.19□□□□□ -1.26
CAPN3-218ENST00000568153 NECAB3Q96P71 396 aaPredicted RBP7.19□□□□□ -1.26
CAPN3-218ENST00000568153 RTFDC1Q9BY42 306 aaPredicted RBP7.19□□□□□ -1.26
CAPN3-218ENST00000568153 LRRC2Q9BYS8 371 aa7.19□□□□□ -1.26
CAPN3-218ENST00000568153 AGXT2Q9BYV1 514 aa7.19□□□□□ -1.26
CAPN3-218ENST00000568153 TMEM39AQ9NV64 488 aa7.19□□□□□ -1.26
CAPN3-218ENST00000568153 AATFQ9NY61 560 aaKnown RBP eCLIP7.19□□□□□ -1.26
CAPN3-218ENST00000568153 ZSWIM5Q9P217 1185 aa7.19□□□□□ -1.26
CAPN3-218ENST00000568153 ANAPC4Q9UJX5 808 aa7.19□□□□□ -1.26
CAPN3-218ENST00000568153 TTF2Q9UNY4 1162 aaKnown RBP7.19□□□□□ -1.26
CAPN3-218ENST00000568153 WDR19Q8NEZ3 1342 aa7.19□□□□□ -1.26
CAPN3-218ENST00000568153 SPEF2Q9C093 1822 aa7.18□□□□□ -1.26
CAPN3-218ENST00000568153 UBR3Q6ZT12 1888 aa7.18□□□□□ -1.26
CAPN3-218ENST00000568153 GPR75-ASB3A0A0A6YYF3 556 aa7.18□□□□□ -1.26
CAPN3-218ENST00000568153 LOC100289279A0A1B0GTE1 492 aa7.18□□□□□ -1.26
CAPN3-218ENST00000568153 ENC1O14682 589 aa7.18□□□□□ -1.26
CAPN3-218ENST00000568153 DHX16O60231 1041 aaKnown RBP7.18□□□□□ -1.26
CAPN3-218ENST00000568153 LARGE1O95461 756 aa7.18□□□□□ -1.26
CAPN3-218ENST00000568153 ECEL1O95672 775 aa7.18□□□□□ -1.26
CAPN3-218ENST00000568153 DLGAP3O95886 979 aa7.18□□□□□ -1.26
CAPN3-218ENST00000568153 CTSBP07858 339 aa7.18□□□□□ -1.26
CAPN3-218ENST00000568153 PCP11498 1178 aaKnown RBP7.18□□□□□ -1.26
CAPN3-218ENST00000568153 PDCP20941 246 aa7.18□□□□□ -1.26
CAPN3-218ENST00000568153 GJB2P29033 226 aa7.18□□□□□ -1.26
CAPN3-218ENST00000568153 PDIA3P30101 505 aaKnown RBP7.18□□□□□ -1.26
CAPN3-218ENST00000568153 EVCP57679 992 aa7.18□□□□□ -1.26
CAPN3-218ENST00000568153 PPARAQ07869 468 aa7.18□□□□□ -1.26
CAPN3-218ENST00000568153 APOBRQ0VD83 1088 aa7.18□□□□□ -1.26
CAPN3-218ENST00000568153 STK3Q13188 491 aa7.18□□□□□ -1.26
CAPN3-218ENST00000568153 DUOXA2Q1HG44 320 aa7.18□□□□□ -1.26
CAPN3-218ENST00000568153 SBK1Q52WX2 424 aa7.18□□□□□ -1.26
CAPN3-218ENST00000568153 MFSD14BQ5SR56 506 aa7.18□□□□□ -1.26
CAPN3-218ENST00000568153 LARP1BQ659C4 914 aaKnown RBP7.18□□□□□ -1.26
CAPN3-218ENST00000568153 CTR9Q6PD62 1173 aa7.18□□□□□ -1.26
CAPN3-218ENST00000568153 CLEC17AQ6ZS10 378 aa7.18□□□□□ -1.26
CAPN3-218ENST00000568153 ACAD11Q709F0 780 aa7.18□□□□□ -1.26
CAPN3-218ENST00000568153 MB21D2Q8IYB1 491 aaPredicted RBP7.18□□□□□ -1.26
CAPN3-218ENST00000568153 AGGF1Q8N302 714 aaeCLIP7.18□□□□□ -1.26
CAPN3-218ENST00000568153 SDR42E1Q8WUS8 393 aa7.18□□□□□ -1.26
CAPN3-218ENST00000568153 STAG1Q8WVM7 1258 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms