RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 CTNNA3Q9UI47 895 aa10.74□□□□□ -0.69
CDH13-210ENST00000567445 TRAK2O60296 914 aa10.73□□□□□ -0.69
CDH13-210ENST00000567445 RGS20O76081 388 aa10.73□□□□□ -0.69
CDH13-210ENST00000567445 MYL3P08590 195 aa10.73□□□□□ -0.69
CDH13-210ENST00000567445 SUPT20HL2P0C7V6 817 aa10.73□□□□□ -0.69
CDH13-210ENST00000567445 CDC37Q16543 378 aaPredicted RBP10.73□□□□□ -0.69
CDH13-210ENST00000567445 ASPRV1Q53RT3 343 aa10.73□□□□□ -0.69
CDH13-210ENST00000567445 ADGRF4Q8IZF3 695 aa10.73□□□□□ -0.69
CDH13-210ENST00000567445 ENAHQ8N8S7 591 aaPredicted RBP10.73□□□□□ -0.69
CDH13-210ENST00000567445 MTG1Q9BT17 334 aaPredicted RBP10.73□□□□□ -0.69
CDH13-210ENST00000567445 KRT23Q9C075 422 aa10.73□□□□□ -0.69
CDH13-210ENST00000567445 WNT8AQ9H1J5 351 aa10.73□□□□□ -0.69
CDH13-210ENST00000567445 TRMT13Q9NUP7 481 aaKnown RBP10.73□□□□□ -0.69
CDH13-210ENST00000567445 CXXC1Q9P0U4 656 aaPredicted RBP10.73□□□□□ -0.69
CDH13-210ENST00000567445 ZSWIM5Q9P217 1185 aa10.73□□□□□ -0.69
CDH13-210ENST00000567445 TNKSO95271 1327 aa10.72□□□□□ -0.69
CDH13-210ENST00000567445 ABCB11O95342 1321 aa10.72□□□□□ -0.69
CDH13-210ENST00000567445 SCN10AQ9Y5Y9 1956 aa10.72□□□□□ -0.69
CDH13-210ENST00000567445 KPNA6O60684 536 aa10.72□□□□□ -0.69
CDH13-210ENST00000567445 TXNP10599 105 aaKnown RBP10.72□□□□□ -0.69
CDH13-210ENST00000567445 TTLL4Q14679 1199 aa10.72□□□□□ -0.69
CDH13-210ENST00000567445 RAB30Q15771 203 aa10.72□□□□□ -0.69
CDH13-210ENST00000567445 RPUSD2Q8IZ73 545 aaKnown RBP10.72□□□□□ -0.69
CDH13-210ENST00000567445 KCTD17Q8N5Z5 321 aa10.72□□□□□ -0.69
CDH13-210ENST00000567445 UBAC1Q9BSL1 405 aa10.72□□□□□ -0.69
CDH13-210ENST00000567445 TRAIPQ9BWF2 469 aa10.72□□□□□ -0.69
CDH13-210ENST00000567445 CNNM2Q9H8M5 875 aa10.72□□□□□ -0.69
CDH13-210ENST00000567445 MSRAQ9UJ68 235 aa10.72□□□□□ -0.69
CDH13-210ENST00000567445 DHX16O60231 1041 aaKnown RBP10.71□□□□□ -0.69
CDH13-210ENST00000567445 PARP1P09874 1014 aaKnown RBP10.71□□□□□ -0.69
CDH13-210ENST00000567445 CYP2C9P11712 490 aa10.71□□□□□ -0.69
CDH13-210ENST00000567445 QRICH1Q2TAL8 776 aa10.71□□□□□ -0.69
CDH13-210ENST00000567445 NBPF20Q3BBV1 942 aa10.71□□□□□ -0.69
CDH13-210ENST00000567445 NFRKBQ6P4R8 1299 aa10.71□□□□□ -0.69
CDH13-210ENST00000567445 OTOP2Q7RTS6 562 aa10.71□□□□□ -0.69
CDH13-210ENST00000567445 MCF2L2Q86YR7 1114 aa10.71□□□□□ -0.69
CDH13-210ENST00000567445 SYTL5Q8TDW5 730 aaPredicted RBP10.71□□□□□ -0.69
CDH13-210ENST00000567445 NSUN6Q8TEA1 469 aaKnown RBP10.71□□□□□ -0.69
CDH13-210ENST00000567445 TBC1D5Q92609 795 aa10.71□□□□□ -0.69
CDH13-210ENST00000567445 COPS5Q92905 334 aa10.71□□□□□ -0.69
CDH13-210ENST00000567445 SCLYQ96I15 445 aa10.71□□□□□ -0.69
CDH13-210ENST00000567445 CHD9Q3L8U1 2897 aa10.71□□□□□ -0.7
CDH13-210ENST00000567445 ARIH2O95376 493 aa10.7□□□□□ -0.7
CDH13-210ENST00000567445 PFKMP08237 780 aa10.7□□□□□ -0.7
CDH13-210ENST00000567445 KCNC4Q03721 635 aa10.7□□□□□ -0.7
CDH13-210ENST00000567445 FAM47CQ5HY64 1035 aa10.7□□□□□ -0.7
CDH13-210ENST00000567445 CCDC62Q6P9F0 684 aa10.7□□□□□ -0.7
CDH13-210ENST00000567445 FBXO11Q86XK2 927 aa10.7□□□□□ -0.7
CDH13-210ENST00000567445 VWCEQ96DN2 955 aa10.7□□□□□ -0.7
CDH13-210ENST00000567445 TAAR1Q96RJ0 339 aa10.7□□□□□ -0.7
CDH13-210ENST00000567445 IWS1Q96ST2 819 aa10.7□□□□□ -0.7
CDH13-210ENST00000567445 GAS2L1Q99501 681 aaPredicted RBP10.7□□□□□ -0.7
CDH13-210ENST00000567445 IL25Q9H293 177 aa10.7□□□□□ -0.7
CDH13-210ENST00000567445 JMJD4Q9H9V9 463 aa10.7□□□□□ -0.7
CDH13-210ENST00000567445 COL20A1Q9P218 1284 aa10.7□□□□□ -0.7
CDH13-210ENST00000567445 MRPL11Q9Y3B7 192 aaKnown RBP10.7□□□□□ -0.7
CDH13-210ENST00000567445 SLC4A7Q9Y6M7 1214 aa10.7□□□□□ -0.7
CDH13-210ENST00000567445 MYH6P13533 1939 aa10.7□□□□□ -0.7
CDH13-210ENST00000567445 TTC28Q96AY4 2481 aa10.7□□□□□ -0.7
CDH13-210ENST00000567445 PTPN11Q06124 597 aaPredicted RBP10.69□□□□□ -0.7
CDH13-210ENST00000567445 SEC23AQ15436 765 aa10.69□□□□□ -0.7
CDH13-210ENST00000567445 STXBP2Q15833 593 aa10.69□□□□□ -0.7
CDH13-210ENST00000567445 IFIT1BQ5T764 474 aaKnown RBP10.69□□□□□ -0.7
CDH13-210ENST00000567445 SEPT14Q6ZU15 432 aa10.69□□□□□ -0.7
CDH13-210ENST00000567445 RMDN3Q96TC7 470 aa10.69□□□□□ -0.7
CDH13-210ENST00000567445 PRDM12Q9H4Q4 367 aa10.69□□□□□ -0.7
CDH13-210ENST00000567445 SLC28A3Q9HAS3 691 aa10.69□□□□□ -0.7
CDH13-210ENST00000567445 VAT1LQ9HCJ6 419 aa10.69□□□□□ -0.7
CDH13-210ENST00000567445 CHD7Q9P2D1 2997 aa10.69□□□□□ -0.7
CDH13-210ENST00000567445 ZBBXA8MT70 800 aa10.68□□□□□ -0.7
CDH13-210ENST00000567445 GH1P01241 217 aa10.68□□□□□ -0.7
CDH13-210ENST00000567445 GSPT1P15170 499 aaKnown RBP10.68□□□□□ -0.7
CDH13-210ENST00000567445 RFC2P35250 354 aa10.68□□□□□ -0.7
CDH13-210ENST00000567445 ARHGAP1Q07960 439 aa10.68□□□□□ -0.7
CDH13-210ENST00000567445 PTGDRQ13258 359 aa10.68□□□□□ -0.7
CDH13-210ENST00000567445 LY6KQ17RY6 165 aa10.68□□□□□ -0.7
CDH13-210ENST00000567445 TTC22Q5TAA0 569 aa10.68□□□□□ -0.7
CDH13-210ENST00000567445 DEFB128Q7Z7B8 93 aa10.68□□□□□ -0.7
CDH13-210ENST00000567445 STAG2Q8N3U4 1231 aa10.68□□□□□ -0.7
CDH13-210ENST00000567445 USP38Q8NB14 1042 aa10.68□□□□□ -0.7
CDH13-210ENST00000567445 AFG1LQ8WV93 481 aa10.68□□□□□ -0.7
CDH13-210ENST00000567445 AMNQ9BXJ7 453 aa10.68□□□□□ -0.7
CDH13-210ENST00000567445 NKX2-4Q9H2Z4 354 aa10.68□□□□□ -0.7
CDH13-210ENST00000567445 YBX2Q9Y2T7 364 aaKnown RBP10.68□□□□□ -0.7
CDH13-210ENST00000567445 SPTBN5Q9NRC6 3674 aaKnown RBP10.68□□□□□ -0.7
CDH13-210ENST00000567445 GBF1Q92538 1859 aa10.68□□□□□ -0.7
CDH13-210ENST00000567445 KIAA1217Q5T5P2 1943 aa10.68□□□□□ -0.7
CDH13-210ENST00000567445 KLRF2D3W0D1 207 aa10.68□□□□□ -0.7
CDH13-210ENST00000567445 EIF3JO75822 258 aaKnown RBP10.68□□□□□ -0.7
CDH13-210ENST00000567445 CFBP00751 764 aa10.68□□□□□ -0.7
CDH13-210ENST00000567445 NR3C2P08235 984 aa10.68□□□□□ -0.7
CDH13-210ENST00000567445 MMP3P08254 477 aa10.68□□□□□ -0.7
CDH13-210ENST00000567445 ACTN1P12814 892 aa10.68□□□□□ -0.7
CDH13-210ENST00000567445 ATP2A2P16615 1042 aaKnown RBP10.68□□□□□ -0.7
CDH13-210ENST00000567445 EIF2AK2P19525 551 aaKnown RBP10.68□□□□□ -0.7
CDH13-210ENST00000567445 HSD17B4P51659 736 aa10.68□□□□□ -0.7
CDH13-210ENST00000567445 RABGGTBP53611 331 aa10.68□□□□□ -0.7
CDH13-210ENST00000567445 GHRHRQ02643 423 aa10.68□□□□□ -0.7
CDH13-210ENST00000567445 TRDNQ13061 729 aa10.68□□□□□ -0.7
CDH13-210ENST00000567445 BFSP2Q13515 415 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms