RNA–Protein interactions for RNA: ENST00000567165.5

LYRM1-207, Transcript of LYR motif containing 1, humanhuman

TSL 1 (best)

Gene LYRM1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1-207ENST00000567165 MYL10Q9BUA6 226 aa12.62□□□□□ -0.39
LYRM1-207ENST00000567165 NKX2-4Q9H2Z4 354 aa12.62□□□□□ -0.39
LYRM1-207ENST00000567165 PRDM12Q9H4Q4 367 aa12.62□□□□□ -0.39
LYRM1-207ENST00000567165 LY9Q9HBG7 655 aa12.62□□□□□ -0.39
LYRM1-207ENST00000567165 MRVI1Q9Y6F6 885 aa12.62□□□□□ -0.39
LYRM1-207ENST00000567165 CHD7Q9P2D1 2997 aa12.61□□□□□ -0.39
LYRM1-207ENST00000567165 PNMA6FA0A0J9YX94 578 aa12.61□□□□□ -0.39
LYRM1-207ENST00000567165 RBAK-RBAKDNI3L0D1 243 aa12.61□□□□□ -0.39
LYRM1-207ENST00000567165 MYOGP15173 224 aa12.61□□□□□ -0.39
LYRM1-207ENST00000567165 PTPN11Q06124 597 aaPredicted RBP12.61□□□□□ -0.39
LYRM1-207ENST00000567165 PGM5Q15124 567 aa12.61□□□□□ -0.39
LYRM1-207ENST00000567165 RAB30Q15771 203 aa12.61□□□□□ -0.39
LYRM1-207ENST00000567165 PTGISQ16647 500 aa12.61□□□□□ -0.39
LYRM1-207ENST00000567165 FCHSD1Q86WN1 690 aa12.61□□□□□ -0.39
LYRM1-207ENST00000567165 USP38Q8NB14 1042 aa12.61□□□□□ -0.39
LYRM1-207ENST00000567165 PPTC7Q8NI37 304 aa12.61□□□□□ -0.39
LYRM1-207ENST00000567165 GPKOWQ92917 476 aaPredicted RBP eCLIP12.61□□□□□ -0.39
LYRM1-207ENST00000567165 EMID1Q96A84 441 aaPredicted RBP12.61□□□□□ -0.39
LYRM1-207ENST00000567165 COL25A1Q9BXS0 654 aaPredicted RBP12.61□□□□□ -0.39
LYRM1-207ENST00000567165 LSG1Q9H089 658 aaKnown RBP12.61□□□□□ -0.39
LYRM1-207ENST00000567165 MSRAQ9UJ68 235 aa12.61□□□□□ -0.39
LYRM1-207ENST00000567165 NOD1Q9Y239 953 aa12.61□□□□□ -0.39
LYRM1-207ENST00000567165 MYH7BA7E2Y1 1941 aa12.6□□□□□ -0.39
LYRM1-207ENST00000567165 GCOM1H8Y6P7 765 aaPredicted RBP12.6□□□□□ -0.39
LYRM1-207ENST00000567165 PRC1O43663 620 aa12.6□□□□□ -0.39
LYRM1-207ENST00000567165 PFKMP08237 780 aa12.6□□□□□ -0.39
LYRM1-207ENST00000567165 IQCF3P0C7M6 154 aa12.6□□□□□ -0.39
LYRM1-207ENST00000567165 POLR2MP0CAP2 368 aa12.6□□□□□ -0.39
LYRM1-207ENST00000567165 CASTP20810 708 aaKnown RBP12.6□□□□□ -0.39
LYRM1-207ENST00000567165 DGKDQ16760 1214 aa12.6□□□□□ -0.39
LYRM1-207ENST00000567165 SESTD1Q86VW0 696 aa12.6□□□□□ -0.39
LYRM1-207ENST00000567165 DHX37Q8IY37 1157 aaKnown RBP12.6□□□□□ -0.39
LYRM1-207ENST00000567165 ZNF654Q8IZM8 581 aa12.6□□□□□ -0.39
LYRM1-207ENST00000567165 RETREG2Q8NC44 543 aa12.6□□□□□ -0.39
LYRM1-207ENST00000567165 ESYT1Q9BSJ8 1104 aa12.6□□□□□ -0.39
LYRM1-207ENST00000567165 ALG1Q9BT22 464 aa12.6□□□□□ -0.39
LYRM1-207ENST00000567165 MAP3K20Q9NYL2 800 aaKnown RBP12.6□□□□□ -0.39
LYRM1-207ENST00000567165 SLC4A7Q9Y6M7 1214 aa12.6□□□□□ -0.39
LYRM1-207ENST00000567165 SLC27A2O14975 620 aa12.59□□□□□ -0.39
LYRM1-207ENST00000567165 DDAH1O94760 285 aa12.59□□□□□ -0.39
LYRM1-207ENST00000567165 GGPS1O95749 300 aa12.59□□□□□ -0.39
LYRM1-207ENST00000567165 F2P00734 622 aa12.59□□□□□ -0.39
LYRM1-207ENST00000567165 ATP2A2P16615 1042 aaKnown RBP12.59□□□□□ -0.39
LYRM1-207ENST00000567165 UBA1P22314 1058 aaKnown RBP12.59□□□□□ -0.39
LYRM1-207ENST00000567165 CCND2P30279 289 aa12.59□□□□□ -0.39
LYRM1-207ENST00000567165 RFC2P35250 354 aa12.59□□□□□ -0.39
LYRM1-207ENST00000567165 PSEN2P49810 448 aa12.59□□□□□ -0.39
LYRM1-207ENST00000567165 SP2Q02086 613 aa12.59□□□□□ -0.39
LYRM1-207ENST00000567165 BFSP2Q13515 415 aa12.59□□□□□ -0.39
LYRM1-207ENST00000567165 LAMC2Q13753 1193 aa12.59□□□□□ -0.39
LYRM1-207ENST00000567165 MFSD10Q14728 455 aa12.59□□□□□ -0.39
LYRM1-207ENST00000567165 HSDL1Q3SXM5 330 aa12.59□□□□□ -0.39
LYRM1-207ENST00000567165 CELF3Q5SZQ8 465 aaKnown RBP12.59□□□□□ -0.39
LYRM1-207ENST00000567165 CASC1Q6TDU7 716 aa12.59□□□□□ -0.39
LYRM1-207ENST00000567165 VSIG10LQ86VR7 867 aa12.59□□□□□ -0.39
LYRM1-207ENST00000567165 DHX38Q92620 1227 aaKnown RBP12.59□□□□□ -0.39
LYRM1-207ENST00000567165 SPATA33Q96N06 139 aa12.59□□□□□ -0.39
LYRM1-207ENST00000567165 FTOQ9C0B1 505 aaKnown RBP eCLIP12.59□□□□□ -0.39
LYRM1-207ENST00000567165 HDAC6Q9UBN7 1215 aa12.59□□□□□ -0.39
LYRM1-207ENST00000567165 CUL9Q8IWT3 2517 aa12.58□□□□□ -0.4
LYRM1-207ENST00000567165 TRIP12Q14669 1992 aaPredicted RBP12.58□□□□□ -0.4
LYRM1-207ENST00000567165 SH2B2O14492 632 aaPredicted RBP12.58□□□□□ -0.4
LYRM1-207ENST00000567165 PLEKHA8P1O95397 391 aa12.58□□□□□ -0.4
LYRM1-207ENST00000567165 RXRAP19793 462 aa12.58□□□□□ -0.4
LYRM1-207ENST00000567165 TRAF1Q13077 416 aa12.58□□□□□ -0.4
LYRM1-207ENST00000567165 ADGRE1Q14246 886 aa12.58□□□□□ -0.4
LYRM1-207ENST00000567165 KIAA0753Q2KHM9 967 aa12.58□□□□□ -0.4
LYRM1-207ENST00000567165 MYSM1Q5VVJ2 828 aa12.58□□□□□ -0.4
LYRM1-207ENST00000567165 CREB3L3Q68CJ9 461 aa12.58□□□□□ -0.4
LYRM1-207ENST00000567165 RAB11FIP4Q86YS3 637 aa12.58□□□□□ -0.4
LYRM1-207ENST00000567165 CMTR1Q8N1G2 835 aaKnown RBP12.58□□□□□ -0.4
LYRM1-207ENST00000567165 SAMD3Q8N6K7 520 aa12.58□□□□□ -0.4
LYRM1-207ENST00000567165 C7orf31Q8N865 590 aa12.58□□□□□ -0.4
LYRM1-207ENST00000567165 CTCFLQ8NI51 663 aaPredicted RBP12.58□□□□□ -0.4
LYRM1-207ENST00000567165 PPM1EQ8WY54 764 aa12.58□□□□□ -0.4
LYRM1-207ENST00000567165 GAS2L1Q99501 681 aaPredicted RBP12.58□□□□□ -0.4
LYRM1-207ENST00000567165 KATNAL1Q9BW62 490 aa12.58□□□□□ -0.4
LYRM1-207ENST00000567165 SPZ1Q9BXG8 430 aa12.58□□□□□ -0.4
LYRM1-207ENST00000567165 OCEL1Q9H607 264 aa12.58□□□□□ -0.4
LYRM1-207ENST00000567165 BCAS3Q9H6U6 928 aa12.58□□□□□ -0.4
LYRM1-207ENST00000567165 SLC28A3Q9HAS3 691 aa12.58□□□□□ -0.4
LYRM1-207ENST00000567165 PRDM6Q9NQX0 595 aa12.58□□□□□ -0.4
LYRM1-207ENST00000567165 GTF2IRD1Q9UHL9 959 aa12.58□□□□□ -0.4
LYRM1-207ENST00000567165 FRMPD4Q14CM0 1322 aa12.58□□□□□ -0.4
LYRM1-207ENST00000567165 TET1Q8NFU7 2136 aa12.58□□□□□ -0.4
LYRM1-207ENST00000567165 HAS3O00219 553 aa12.57□□□□□ -0.4
LYRM1-207ENST00000567165 ACTN1P12814 892 aa12.57□□□□□ -0.4
LYRM1-207ENST00000567165 HOXD8P13378 290 aaPredicted RBP12.57□□□□□ -0.4
LYRM1-207ENST00000567165 MCM5P33992 734 aa12.57□□□□□ -0.4
LYRM1-207ENST00000567165 MRPS9P82933 396 aaKnown RBP12.57□□□□□ -0.4
LYRM1-207ENST00000567165 ZNF200P98182 395 aaPredicted RBP12.57□□□□□ -0.4
LYRM1-207ENST00000567165 HIC1Q14526 733 aa12.57□□□□□ -0.4
LYRM1-207ENST00000567165 GPNMBQ14956 572 aa12.57□□□□□ -0.4
LYRM1-207ENST00000567165 PPP2R2DQ66LE6 453 aa12.57□□□□□ -0.4
LYRM1-207ENST00000567165 KCNV1Q6PIU1 500 aa12.57□□□□□ -0.4
LYRM1-207ENST00000567165 NFXL1Q6ZNB6 911 aa12.57□□□□□ -0.4
LYRM1-207ENST00000567165 LRRC8DQ7L1W4 858 aa12.57□□□□□ -0.4
LYRM1-207ENST00000567165 SRBD1Q8N5C6 995 aaKnown RBP12.57□□□□□ -0.4
LYRM1-207ENST00000567165 CCDC155Q8N6L0 562 aa12.57□□□□□ -0.4
LYRM1-207ENST00000567165 CAGE1Q8TC20 777 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms