RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 APBA1Q02410 837 aa15.74■□□□□ 0.11
CDH1-209ENST00000566510 CACNB1Q02641 598 aaPredicted RBP15.74■□□□□ 0.11
CDH1-209ENST00000566510 TTC19Q6DKK2 380 aaPredicted RBP15.74■□□□□ 0.11
CDH1-209ENST00000566510 PDXDC1Q6P996 788 aa15.74■□□□□ 0.11
CDH1-209ENST00000566510 LRRC55Q6ZSA7 311 aa15.74■□□□□ 0.11
CDH1-209ENST00000566510 BARGINQ6ZT62 677 aa15.74■□□□□ 0.11
CDH1-209ENST00000566510 RIOX1Q9H6W3 641 aa15.74■□□□□ 0.11
CDH1-209ENST00000566510 STIM2Q9P246 746 aa15.74■□□□□ 0.11
CDH1-209ENST00000566510 GPR75-ASB3A0A0A6YYF3 556 aa15.74■□□□□ 0.11
CDH1-209ENST00000566510 POLR2FP61218 127 aaKnown RBP15.74■□□□□ 0.11
CDH1-209ENST00000566510 ECM1Q16610 540 aa15.74■□□□□ 0.11
CDH1-209ENST00000566510 CNBD1Q8NA66 436 aa15.74■□□□□ 0.11
CDH1-209ENST00000566510 RPGRQ92834 1020 aaKnown RBP15.74■□□□□ 0.11
CDH1-209ENST00000566510 RBM12Q9NTZ6 932 aaKnown RBP15.74■□□□□ 0.11
CDH1-209ENST00000566510 PANK4Q9NVE7 773 aa15.74■□□□□ 0.11
CDH1-209ENST00000566510 DDX25Q9UHL0 483 aaKnown RBP15.74■□□□□ 0.11
CDH1-209ENST00000566510 COL4A3BPQ9Y5P4 624 aa15.74■□□□□ 0.11
CDH1-209ENST00000566510 PPFIA4O75335 1185 aa15.73■□□□□ 0.11
CDH1-209ENST00000566510 PRLRP16471 622 aa15.73■□□□□ 0.11
CDH1-209ENST00000566510 FKBP3Q00688 224 aaKnown RBP15.73■□□□□ 0.11
CDH1-209ENST00000566510 KCNMA1Q12791 1236 aa15.73■□□□□ 0.11
CDH1-209ENST00000566510 COASYQ13057 564 aa15.73■□□□□ 0.11
CDH1-209ENST00000566510 PDIA5Q14554 519 aa15.73■□□□□ 0.11
CDH1-209ENST00000566510 SLC9C1Q4G0N8 1177 aa15.73■□□□□ 0.11
CDH1-209ENST00000566510 SFMBT2Q5VUG0 894 aa15.73■□□□□ 0.11
CDH1-209ENST00000566510 ESYT2A0FGR8 921 aa15.73■□□□□ 0.11
CDH1-209ENST00000566510 F8W031 263 aaPredicted RBP15.73■□□□□ 0.11
CDH1-209ENST00000566510 LCA5LO95447 670 aa15.73■□□□□ 0.11
CDH1-209ENST00000566510 PLCG2P16885 1265 aa15.73■□□□□ 0.11
CDH1-209ENST00000566510 EPS15P42566 896 aa15.73■□□□□ 0.11
CDH1-209ENST00000566510 IFT81Q8WYA0 676 aa15.73■□□□□ 0.11
CDH1-209ENST00000566510 LSM14BQ9BX40 385 aaKnown RBP15.73■□□□□ 0.11
CDH1-209ENST00000566510 TLR10Q9BXR5 811 aa15.73■□□□□ 0.11
CDH1-209ENST00000566510 LRRC27Q9C0I9 530 aa15.73■□□□□ 0.11
CDH1-209ENST00000566510 RIC8AQ9NPQ8 531 aa15.73■□□□□ 0.11
CDH1-209ENST00000566510 BMP2KQ9NSY1 1161 aaPredicted RBP15.73■□□□□ 0.11
CDH1-209ENST00000566510 FTCDO95954 541 aa15.72■□□□□ 0.11
CDH1-209ENST00000566510 SLC16A2P36021 539 aa15.72■□□□□ 0.11
CDH1-209ENST00000566510 ORC2Q13416 577 aaPredicted RBP15.72■□□□□ 0.11
CDH1-209ENST00000566510 KLHDC7AQ5VTJ3 777 aa15.72■□□□□ 0.11
CDH1-209ENST00000566510 DPP8Q6V1X1 898 aaPredicted RBP15.72■□□□□ 0.11
CDH1-209ENST00000566510 MTMR4Q9NYA4 1195 aa15.72■□□□□ 0.11
CDH1-209ENST00000566510 PCDHA12Q9UN75 941 aa15.72■□□□□ 0.11
CDH1-209ENST00000566510 DDX60LQ5H9U9 1706 aaKnown RBP15.72■□□□□ 0.11
CDH1-209ENST00000566510 EDIL3O43854 480 aa15.72■□□□□ 0.11
CDH1-209ENST00000566510 SMARCA1P28370 1054 aa15.72■□□□□ 0.11
CDH1-209ENST00000566510 EPHB4P54760 987 aa15.72■□□□□ 0.11
CDH1-209ENST00000566510 PSMD2Q13200 908 aa15.72■□□□□ 0.11
CDH1-209ENST00000566510 RAPGEF1Q13905 1077 aa15.72■□□□□ 0.11
CDH1-209ENST00000566510 CFAP221Q4G0U5 840 aa15.72■□□□□ 0.11
CDH1-209ENST00000566510 FAM26FQ5R3K3 315 aa15.72■□□□□ 0.11
CDH1-209ENST00000566510 FAM83BQ5T0W9 1011 aa15.72■□□□□ 0.11
CDH1-209ENST00000566510 HAUS3Q68CZ6 603 aa15.72■□□□□ 0.11
CDH1-209ENST00000566510 PACSIN2Q9UNF0 486 aaPredicted RBP15.72■□□□□ 0.11
CDH1-209ENST00000566510 SBF2Q86WG5 1849 aa15.72■□□□□ 0.11
CDH1-209ENST00000566510 CDK5RAP2Q96SN8 1893 aa15.72■□□□□ 0.11
CDH1-209ENST00000566510 NPHP3-ACAD11A0A0J9YXS1 232 aa15.71■□□□□ 0.11
CDH1-209ENST00000566510 ESYT3A0FGR9 886 aa15.71■□□□□ 0.11
CDH1-209ENST00000566510 E9PMD0 336 aa15.71■□□□□ 0.11
CDH1-209ENST00000566510 HSF2BPO75031 334 aa15.71■□□□□ 0.11
CDH1-209ENST00000566510 PALMO75781 387 aa15.71■□□□□ 0.11
CDH1-209ENST00000566510 RHBDL3P58872 404 aa15.71■□□□□ 0.11
CDH1-209ENST00000566510 SLC20A2Q08357 652 aa15.71■□□□□ 0.11
CDH1-209ENST00000566510 RC3H1Q5TC82 1133 aaKnown RBP15.71■□□□□ 0.11
CDH1-209ENST00000566510 HGSNATQ68CP4 663 aa15.71■□□□□ 0.11
CDH1-209ENST00000566510 TBC1D5Q92609 795 aa15.71■□□□□ 0.11
CDH1-209ENST00000566510 FGFBP2Q9BYJ0 223 aa15.71■□□□□ 0.11
CDH1-209ENST00000566510 KIAA1024Q9UPX6 916 aa15.71■□□□□ 0.11
CDH1-209ENST00000566510 KRT18P05783 430 aaKnown RBP15.71■□□□□ 0.11
CDH1-209ENST00000566510 AKR1B1P15121 316 aa15.71■□□□□ 0.11
CDH1-209ENST00000566510 HERC4Q5GLZ8 1057 aaPredicted RBP15.71■□□□□ 0.11
CDH1-209ENST00000566510 TTBK2Q6IQ55 1244 aa15.71■□□□□ 0.11
CDH1-209ENST00000566510 ADGRF4Q8IZF3 695 aa15.71■□□□□ 0.11
CDH1-209ENST00000566510 TSEN2Q8NCE0 465 aaKnown RBP15.71■□□□□ 0.11
CDH1-209ENST00000566510 CAPS2Q9BXY5 557 aa15.71■□□□□ 0.11
CDH1-209ENST00000566510 EHD4Q9H223 541 aa15.71■□□□□ 0.11
CDH1-209ENST00000566510 GGA1Q9UJY5 639 aa15.71■□□□□ 0.11
CDH1-209ENST00000566510 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.71■□□□□ 0.11
CDH1-209ENST00000566510 ABCB11O95342 1321 aa15.71■□□□□ 0.11
CDH1-209ENST00000566510 MPHOSPH10O00566 681 aaKnown RBP15.71■□□□□ 0.1
CDH1-209ENST00000566510 OPA1O60313 960 aa15.71■□□□□ 0.1
CDH1-209ENST00000566510 ITIH3Q06033 890 aa15.71■□□□□ 0.1
CDH1-209ENST00000566510 ASTE1Q2TB18 679 aaPredicted RBP15.71■□□□□ 0.1
CDH1-209ENST00000566510 ASPRV1Q53RT3 343 aa15.71■□□□□ 0.1
CDH1-209ENST00000566510 CERS3Q8IU89 383 aa15.71■□□□□ 0.1
CDH1-209ENST00000566510 CEP72Q9P209 647 aa15.71■□□□□ 0.1
CDH1-209ENST00000566510 ADAMTS1Q9UHI8 967 aa15.71■□□□□ 0.1
CDH1-209ENST00000566510 SSU72P8A0A1W2PR75 194 aa15.7■□□□□ 0.1
CDH1-209ENST00000566510 ZSCAN5CA6NGD5 496 aaPredicted RBP15.7■□□□□ 0.1
CDH1-209ENST00000566510 C6orf229H3BNL8 230 aa15.7■□□□□ 0.1
CDH1-209ENST00000566510 PJA2O43164 708 aa15.7■□□□□ 0.1
CDH1-209ENST00000566510 SERPING1P05155 500 aa15.7■□□□□ 0.1
CDH1-209ENST00000566510 CCT5P48643 541 aa15.7■□□□□ 0.1
CDH1-209ENST00000566510 IRAK1P51617 712 aa15.7■□□□□ 0.1
CDH1-209ENST00000566510 GUCY2DQ02846 1103 aa15.7■□□□□ 0.1
CDH1-209ENST00000566510 EHHADHQ08426 723 aa15.7■□□□□ 0.1
CDH1-209ENST00000566510 KIAA0753Q2KHM9 967 aa15.7■□□□□ 0.1
CDH1-209ENST00000566510 TRAPPC3LQ5T215 181 aa15.7■□□□□ 0.1
CDH1-209ENST00000566510 KCTD16Q68DU8 428 aa15.7■□□□□ 0.1
CDH1-209ENST00000566510 PROM2Q8N271 834 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms