RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 SGSM2O43147 1006 aa13.82□□□□□ -0.2
UBR1-206ENST00000566493 PPFIA4O75335 1185 aa13.82□□□□□ -0.2
UBR1-206ENST00000566493 BAIAP3O94812 1187 aa13.82□□□□□ -0.2
UBR1-206ENST00000566493 TGFB3P10600 412 aa13.82□□□□□ -0.2
UBR1-206ENST00000566493 SELPP16109 830 aa13.82□□□□□ -0.2
UBR1-206ENST00000566493 CLCN6P51797 869 aa13.82□□□□□ -0.2
UBR1-206ENST00000566493 IRX6P78412 446 aaPredicted RBP13.82□□□□□ -0.2
UBR1-206ENST00000566493 ADGRE1Q14246 886 aa13.82□□□□□ -0.2
UBR1-206ENST00000566493 MFSD10Q14728 455 aa13.82□□□□□ -0.2
UBR1-206ENST00000566493 KIAA0753Q2KHM9 967 aa13.82□□□□□ -0.2
UBR1-206ENST00000566493 MYSM1Q5VVJ2 828 aa13.82□□□□□ -0.2
UBR1-206ENST00000566493 LRRC8DQ7L1W4 858 aa13.82□□□□□ -0.2
UBR1-206ENST00000566493 VSIG10LQ86VR7 867 aa13.82□□□□□ -0.2
UBR1-206ENST00000566493 ATXN2LQ8WWM7 1075 aaKnown RBP13.82□□□□□ -0.2
UBR1-206ENST00000566493 SPATA33Q96N06 139 aa13.82□□□□□ -0.2
UBR1-206ENST00000566493 MLXIPQ9HAP2 919 aa13.82□□□□□ -0.2
UBR1-206ENST00000566493 THEGQ9P2T0 379 aa13.82□□□□□ -0.2
UBR1-206ENST00000566493 HDAC6Q9UBN7 1215 aa13.82□□□□□ -0.2
UBR1-206ENST00000566493 GTF2IRD1Q9UHL9 959 aa13.82□□□□□ -0.2
UBR1-206ENST00000566493 SORBS3O60504 671 aa13.81□□□□□ -0.2
UBR1-206ENST00000566493 GGPS1O95749 300 aa13.81□□□□□ -0.2
UBR1-206ENST00000566493 F2P00734 622 aa13.81□□□□□ -0.2
UBR1-206ENST00000566493 CA3P07451 260 aa13.81□□□□□ -0.2
UBR1-206ENST00000566493 ZNF286BP0CG31 522 aa13.81□□□□□ -0.2
UBR1-206ENST00000566493 NUBP1P53384 320 aa13.81□□□□□ -0.2
UBR1-206ENST00000566493 TROAPQ12815 778 aa13.81□□□□□ -0.2
UBR1-206ENST00000566493 CELF3Q5SZQ8 465 aaKnown RBP13.81□□□□□ -0.2
UBR1-206ENST00000566493 CASC1Q6TDU7 716 aa13.81□□□□□ -0.2
UBR1-206ENST00000566493 HERC6Q8IVU3 1022 aa13.81□□□□□ -0.2
UBR1-206ENST00000566493 PIBF1Q8WXW3 757 aa13.81□□□□□ -0.2
UBR1-206ENST00000566493 MAP4K1Q92918 833 aa13.81□□□□□ -0.2
UBR1-206ENST00000566493 SENP2Q9HC62 589 aa13.81□□□□□ -0.2
UBR1-206ENST00000566493 CYTH3O43739 400 aa13.8□□□□□ -0.2
UBR1-206ENST00000566493 RGS20O76081 388 aa13.8□□□□□ -0.2
UBR1-206ENST00000566493 CKBP12277 381 aa13.8□□□□□ -0.2
UBR1-206ENST00000566493 KIF5BP33176 963 aa13.8□□□□□ -0.2
UBR1-206ENST00000566493 PTK7Q13308 1070 aa13.8□□□□□ -0.2
UBR1-206ENST00000566493 GNPTABQ3T906 1256 aa13.8□□□□□ -0.2
UBR1-206ENST00000566493 MICALL1Q8N3F8 863 aa13.8□□□□□ -0.2
UBR1-206ENST00000566493 IL27Q8NEV9 243 aa13.8□□□□□ -0.2
UBR1-206ENST00000566493 IL31RAQ8NI17 732 aa13.8□□□□□ -0.2
UBR1-206ENST00000566493 CTCFLQ8NI51 663 aaPredicted RBP13.8□□□□□ -0.2
UBR1-206ENST00000566493 CUL5Q93034 780 aa13.8□□□□□ -0.2
UBR1-206ENST00000566493 PRDM6Q9NQX0 595 aa13.8□□□□□ -0.2
UBR1-206ENST00000566493 RBM8AQ9Y5S9 174 aaKnown RBP13.8□□□□□ -0.2
UBR1-206ENST00000566493 BAZ2BQ9UIF8 2168 aaKnown RBP13.8□□□□□ -0.2
UBR1-206ENST00000566493 CUL9Q8IWT3 2517 aa13.79□□□□□ -0.2
UBR1-206ENST00000566493 HAS3O00219 553 aa13.79□□□□□ -0.2
UBR1-206ENST00000566493 NOP56O00567 594 aaKnown RBP13.79□□□□□ -0.2
UBR1-206ENST00000566493 GTPBP6O43824 516 aaPredicted RBP13.79□□□□□ -0.2
UBR1-206ENST00000566493 TLL1O43897 1013 aa13.79□□□□□ -0.2
UBR1-206ENST00000566493 STAM2O75886 525 aa13.79□□□□□ -0.2
UBR1-206ENST00000566493 UBA1P22314 1058 aaKnown RBP13.79□□□□□ -0.2
UBR1-206ENST00000566493 MRPS5P82675 430 aaKnown RBP13.79□□□□□ -0.2
UBR1-206ENST00000566493 RBL2Q08999 1139 aa13.79□□□□□ -0.2
UBR1-206ENST00000566493 SLC35G1Q2M3R5 365 aa13.79□□□□□ -0.2
UBR1-206ENST00000566493 HSDL1Q3SXM5 330 aa13.79□□□□□ -0.2
UBR1-206ENST00000566493 CNKSR3Q6P9H4 555 aa13.79□□□□□ -0.2
UBR1-206ENST00000566493 NFXL1Q6ZNB6 911 aa13.79□□□□□ -0.2
UBR1-206ENST00000566493 MB21D2Q8IYB1 491 aaPredicted RBP13.79□□□□□ -0.2
UBR1-206ENST00000566493 TMTC2Q8N394 836 aa13.79□□□□□ -0.2
UBR1-206ENST00000566493 IGDCC4Q8TDY8 1250 aa13.79□□□□□ -0.2
UBR1-206ENST00000566493 DHX38Q92620 1227 aaKnown RBP13.79□□□□□ -0.2
UBR1-206ENST00000566493 RRP36Q96EU6 259 aaKnown RBP13.79□□□□□ -0.2
UBR1-206ENST00000566493 ZFP91Q96JP5 570 aaPredicted RBP13.79□□□□□ -0.2
UBR1-206ENST00000566493 CTAGE1Q96RT6 745 aa13.79□□□□□ -0.2
UBR1-206ENST00000566493 MAP3K14Q99558 947 aa13.79□□□□□ -0.2
UBR1-206ENST00000566493 LZTS2Q9BRK4 669 aa13.79□□□□□ -0.2
UBR1-206ENST00000566493 ZBED2Q9BTP6 218 aa13.79□□□□□ -0.2
UBR1-206ENST00000566493 CERS4Q9HA82 394 aa13.79□□□□□ -0.2
UBR1-206ENST00000566493 SEC63Q9UGP8 760 aaKnown RBP13.79□□□□□ -0.2
UBR1-206ENST00000566493 TAF6LQ9Y6J9 622 aa13.79□□□□□ -0.2
UBR1-206ENST00000566493 CHD9Q3L8U1 2897 aa13.78□□□□□ -0.2
UBR1-206ENST00000566493 CCDC69A6NI79 296 aa13.78□□□□□ -0.2
UBR1-206ENST00000566493 DDAH1O94760 285 aa13.78□□□□□ -0.2
UBR1-206ENST00000566493 HOXD8P13378 290 aaPredicted RBP13.78□□□□□ -0.2
UBR1-206ENST00000566493 MCM5P33992 734 aa13.78□□□□□ -0.2
UBR1-206ENST00000566493 GNAQP50148 359 aa13.78□□□□□ -0.2
UBR1-206ENST00000566493 ANTXR2P58335 489 aa13.78□□□□□ -0.2
UBR1-206ENST00000566493 SP2Q02086 613 aa13.78□□□□□ -0.2
UBR1-206ENST00000566493 IKBKEQ14164 716 aa13.78□□□□□ -0.2
UBR1-206ENST00000566493 ZNF654Q8IZM8 581 aa13.78□□□□□ -0.2
UBR1-206ENST00000566493 SMARCC2Q8TAQ2 1214 aa13.78□□□□□ -0.2
UBR1-206ENST00000566493 ASB2Q96Q27 587 aa13.78□□□□□ -0.2
UBR1-206ENST00000566493 MTA3Q9BTC8 594 aa13.78□□□□□ -0.2
UBR1-206ENST00000566493 SPZ1Q9BXG8 430 aa13.78□□□□□ -0.2
UBR1-206ENST00000566493 TET1Q8NFU7 2136 aa13.78□□□□□ -0.2
UBR1-206ENST00000566493 ABHD14A-ACY1A0A1B0GW23 586 aa13.77□□□□□ -0.21
UBR1-206ENST00000566493 H3BRB1 525 aa13.77□□□□□ -0.21
UBR1-206ENST00000566493 PRC1O43663 620 aa13.77□□□□□ -0.21
UBR1-206ENST00000566493 EFCAB14O75071 495 aa13.77□□□□□ -0.21
UBR1-206ENST00000566493 CXCL10P02778 98 aa13.77□□□□□ -0.21
UBR1-206ENST00000566493 SMARCA1P28370 1054 aa13.77□□□□□ -0.21
UBR1-206ENST00000566493 WDR5P61964 334 aaKnown RBP13.77□□□□□ -0.21
UBR1-206ENST00000566493 TAP1Q03518 808 aa13.77□□□□□ -0.21
UBR1-206ENST00000566493 NEDD9Q14511 834 aa13.77□□□□□ -0.21
UBR1-206ENST00000566493 SKIV2LQ15477 1246 aaKnown RBP13.77□□□□□ -0.21
UBR1-206ENST00000566493 ARNTL2Q8WYA1 636 aa13.77□□□□□ -0.21
UBR1-206ENST00000566493 GPKOWQ92917 476 aaPredicted RBP eCLIP13.77□□□□□ -0.21
UBR1-206ENST00000566493 TUT1Q9H6E5 874 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms