RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 XRRA1Q6P2D8 792 aa29.61■■■□□ 2.33
NME3-208ENST00000565379 MORC4Q8TE76 937 aa29.61■■■□□ 2.33
NME3-208ENST00000565379 UPF3AQ9H1J1 476 aaKnown RBP29.61■■■□□ 2.33
NME3-208ENST00000565379 PRKAG2Q9UGJ0 569 aa29.61■■■□□ 2.33
NME3-208ENST00000565379 PCDHA6Q9UN73 950 aa29.61■■■□□ 2.33
NME3-208ENST00000565379 PCDHA8Q9Y5H6 950 aa29.61■■■□□ 2.33
NME3-208ENST00000565379 FRMPD4Q14CM0 1322 aa29.61■■■□□ 2.33
NME3-208ENST00000565379 BEX3Q00994 111 aa29.6■■■□□ 2.33
NME3-208ENST00000565379 NPY5RQ15761 445 aa29.6■■■□□ 2.33
NME3-208ENST00000565379 M0R2N6 131 aa29.59■■■□□ 2.33
NME3-208ENST00000565379 PQBP1O60828 265 aaKnown RBP29.59■■■□□ 2.33
NME3-208ENST00000565379 EDNRBP24530 442 aa29.59■■■□□ 2.33
NME3-208ENST00000565379 ITGB8P26012 769 aa29.59■■■□□ 2.33
NME3-208ENST00000565379 GJA9P57773 515 aa29.59■■■□□ 2.33
NME3-208ENST00000565379 TAPT1Q6NXT6 567 aa29.59■■■□□ 2.33
NME3-208ENST00000565379 Q7L0L9 218 aa29.59■■■□□ 2.33
NME3-208ENST00000565379 TSEN34Q9BSV6 310 aaKnown RBP29.59■■■□□ 2.33
NME3-208ENST00000565379 MTMR10Q9NXD2 777 aa29.59■■■□□ 2.33
NME3-208ENST00000565379 H3BQV1 296 aa29.58■■■□□ 2.33
NME3-208ENST00000565379 SMPD1P17405 629 aa29.58■■■□□ 2.33
NME3-208ENST00000565379 TNFAIP2Q03169 654 aa29.58■■■□□ 2.33
NME3-208ENST00000565379 C1orf53Q5VUE5 145 aa29.58■■■□□ 2.33
NME3-208ENST00000565379 KRT25Q7Z3Z0 450 aa29.58■■■□□ 2.33
NME3-208ENST00000565379 PDCD2LQ9BRP1 358 aa29.58■■■□□ 2.33
NME3-208ENST00000565379 ANO3Q9BYT9 981 aa29.58■■■□□ 2.33
NME3-208ENST00000565379 TSHZ2Q9NRE2 1034 aa29.58■■■□□ 2.33
NME3-208ENST00000565379 GJB4Q9NTQ9 266 aa29.58■■■□□ 2.33
NME3-208ENST00000565379 STAM2O75886 525 aa29.57■■■□□ 2.32
NME3-208ENST00000565379 CST5P28325 142 aaPredicted RBP29.57■■■□□ 2.32
NME3-208ENST00000565379 JAKMIP3Q5VZ66 844 aa29.57■■■□□ 2.32
NME3-208ENST00000565379 DIS3L2Q8IYB7 885 aaKnown RBP29.57■■■□□ 2.32
NME3-208ENST00000565379 BADQ92934 168 aa29.57■■■□□ 2.32
NME3-208ENST00000565379 FOXP1Q9H334 677 aaPredicted RBP29.57■■■□□ 2.32
NME3-208ENST00000565379 STARD7Q9NQZ5 370 aa29.57■■■□□ 2.32
NME3-208ENST00000565379 FOXD4L1Q9NU39 408 aa29.57■■■□□ 2.32
NME3-208ENST00000565379 GNEQ9Y223 722 aaKnown RBP29.57■■■□□ 2.32
NME3-208ENST00000565379 ASGR1P07306 291 aa29.56■■■□□ 2.32
NME3-208ENST00000565379 NR3C2P08235 984 aa29.56■■■□□ 2.32
NME3-208ENST00000565379 EIF2AK2P19525 551 aaKnown RBP29.56■■■□□ 2.32
NME3-208ENST00000565379 FOSBP53539 338 aa29.56■■■□□ 2.32
NME3-208ENST00000565379 PDE4DQ08499 809 aa29.56■■■□□ 2.32
NME3-208ENST00000565379 PGM5Q15124 567 aa29.56■■■□□ 2.32
NME3-208ENST00000565379 STXBP2Q15833 593 aa29.56■■■□□ 2.32
NME3-208ENST00000565379 GNASQ5JWF2 1037 aa29.56■■■□□ 2.32
NME3-208ENST00000565379 TMEM260Q9NX78 707 aa29.56■■■□□ 2.32
NME3-208ENST00000565379 DAXXQ9UER7 740 aaPredicted RBP29.56■■■□□ 2.32
NME3-208ENST00000565379 STXBP5LQ9Y2K9 1186 aa29.56■■■□□ 2.32
NME3-208ENST00000565379 COL6A3P12111 3177 aa29.56■■■□□ 2.32
NME3-208ENST00000565379 CCND2P30279 289 aa29.55■■■□□ 2.32
NME3-208ENST00000565379 SREBF1P36956 1147 aa29.55■■■□□ 2.32
NME3-208ENST00000565379 PCNX4Q63HM2 1172 aa29.55■■■□□ 2.32
NME3-208ENST00000565379 CCDC194A0A1B0GVG4 234 aa29.54■■■□□ 2.32
NME3-208ENST00000565379 MOXD2PA6NHM9 499 aa29.54■■■□□ 2.32
NME3-208ENST00000565379 EIF3JO75822 258 aaKnown RBP29.54■■■□□ 2.32
NME3-208ENST00000565379 GUCY1B3Q02153 619 aa29.54■■■□□ 2.32
NME3-208ENST00000565379 NONOQ15233 471 aaKnown RBP eCLIP29.54■■■□□ 2.32
NME3-208ENST00000565379 TLK2Q86UE8 772 aa29.54■■■□□ 2.32
NME3-208ENST00000565379 VSIG10LQ86VR7 867 aa29.54■■■□□ 2.32
NME3-208ENST00000565379 RBM19Q9Y4C8 960 aaKnown RBP29.54■■■□□ 2.32
NME3-208ENST00000565379 DLL1O00548 723 aa29.53■■■□□ 2.32
NME3-208ENST00000565379 CLTBP09497 229 aa29.53■■■□□ 2.32
NME3-208ENST00000565379 GNL2Q13823 731 aaKnown RBP29.53■■■□□ 2.32
NME3-208ENST00000565379 RASGRP4Q8TDF6 673 aa29.53■■■□□ 2.32
NME3-208ENST00000565379 VTA1Q9NP79 307 aa29.53■■■□□ 2.32
NME3-208ENST00000565379 BTBD18B2RXH4 712 aa29.52■■■□□ 2.32
NME3-208ENST00000565379 DYNC1LI2O43237 492 aaPredicted RBP29.52■■■□□ 2.32
NME3-208ENST00000565379 FAAP100Q0VG06 881 aa29.52■■■□□ 2.32
NME3-208ENST00000565379 C9orf50Q5SZB4 431 aa29.52■■■□□ 2.32
NME3-208ENST00000565379 FAM109BQ6ICB4 259 aaPredicted RBP29.52■■■□□ 2.32
NME3-208ENST00000565379 OXER1Q8TDS5 423 aa29.52■■■□□ 2.32
NME3-208ENST00000565379 TNFRSF25Q93038 417 aa29.52■■■□□ 2.32
NME3-208ENST00000565379 SPC25Q9HBM1 224 aa29.52■■■□□ 2.32
NME3-208ENST00000565379 CYP3A4P08684 503 aa29.51■■■□□ 2.31
NME3-208ENST00000565379 SYT1P21579 422 aa29.51■■■□□ 2.31
NME3-208ENST00000565379 USP11P51784 963 aa29.51■■■□□ 2.31
NME3-208ENST00000565379 NKX3-2P78367 333 aa29.51■■■□□ 2.31
NME3-208ENST00000565379 ARHGAP4P98171 946 aa29.51■■■□□ 2.31
NME3-208ENST00000565379 CXCL17Q6UXB2 119 aa29.51■■■□□ 2.31
NME3-208ENST00000565379 ADAMTS3O15072 1205 aa29.5■■■□□ 2.31
NME3-208ENST00000565379 MYCLP12524 364 aaPredicted RBP29.5■■■□□ 2.31
NME3-208ENST00000565379 U2AF2P26368 475 aaKnown RBP eCLIP29.5■■■□□ 2.31
NME3-208ENST00000565379 EPHB4P54760 987 aa29.5■■■□□ 2.31
NME3-208ENST00000565379 FSCN1Q16658 493 aaKnown RBP29.5■■■□□ 2.31
NME3-208ENST00000565379 ANKRD33Q7Z3H0 272 aa29.5■■■□□ 2.31
NME3-208ENST00000565379 PCSK9Q8NBP7 692 aaKnown RBP29.5■■■□□ 2.31
NME3-208ENST00000565379 CRYGNQ8WXF5 182 aa29.5■■■□□ 2.31
NME3-208ENST00000565379 VTI1AQ96AJ9 217 aa29.5■■■□□ 2.31
NME3-208ENST00000565379 GLT1D1Q96MS3 346 aa29.5■■■□□ 2.31
NME3-208ENST00000565379 NAP1L4Q99733 375 aaKnown RBP29.5■■■□□ 2.31
NME3-208ENST00000565379 KIAA0355O15063 1070 aa29.49■■■□□ 2.31
NME3-208ENST00000565379 NR5A1Q13285 461 aa29.49■■■□□ 2.31
NME3-208ENST00000565379 SHHQ15465 462 aa29.49■■■□□ 2.31
NME3-208ENST00000565379 GNPTABQ3T906 1256 aa29.49■■■□□ 2.31
NME3-208ENST00000565379 SPRYD3Q8NCJ5 442 aa29.49■■■□□ 2.31
NME3-208ENST00000565379 TBCKQ8TEA7 893 aa29.49■■■□□ 2.31
NME3-208ENST00000565379 PGBD1Q96JS3 809 aa29.49■■■□□ 2.31
NME3-208ENST00000565379 STX6O43752 255 aa29.48■■■□□ 2.31
NME3-208ENST00000565379 CDK7P50613 346 aa29.48■■■□□ 2.31
NME3-208ENST00000565379 IQSEC1Q6DN90 963 aa29.48■■■□□ 2.31
NME3-208ENST00000565379 KCNV1Q6PIU1 500 aa29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms