RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 TSGA10IPQ3SY00 556 aa17■□□□□ 0.31
USB1-210ENST00000565151 PSRC1Q6PGN9 363 aaPredicted RBP17■□□□□ 0.31
USB1-210ENST00000565151 NFXL1Q6ZNB6 911 aa17■□□□□ 0.31
USB1-210ENST00000565151 TMTC3Q6ZXV5 915 aa17■□□□□ 0.31
USB1-210ENST00000565151 SESTD1Q86VW0 696 aa17■□□□□ 0.31
USB1-210ENST00000565151 DHX37Q8IY37 1157 aaKnown RBP17■□□□□ 0.31
USB1-210ENST00000565151 CCDC82Q8N4S0 544 aa17■□□□□ 0.31
USB1-210ENST00000565151 FANCBQ8NB91 859 aa17■□□□□ 0.31
USB1-210ENST00000565151 SLC17A8Q8NDX2 589 aa17■□□□□ 0.31
USB1-210ENST00000565151 FAM217BQ9NTX9 383 aaPredicted RBP17■□□□□ 0.31
USB1-210ENST00000565151 HDAC6Q9UBN7 1215 aa17■□□□□ 0.31
USB1-210ENST00000565151 YBX2Q9Y2T7 364 aaKnown RBP17■□□□□ 0.31
USB1-210ENST00000565151 CCDC69A6NI79 296 aa16.99■□□□□ 0.31
USB1-210ENST00000565151 PIK3CDO00329 1044 aa16.99■□□□□ 0.31
USB1-210ENST00000565151 CDC45O75419 566 aa16.99■□□□□ 0.31
USB1-210ENST00000565151 GGPS1O95749 300 aa16.99■□□□□ 0.31
USB1-210ENST00000565151 IQCF3P0C7M6 154 aa16.99■□□□□ 0.31
USB1-210ENST00000565151 SUPT20HL2P0C7V6 817 aa16.99■□□□□ 0.31
USB1-210ENST00000565151 CASTP20810 708 aaKnown RBP16.99■□□□□ 0.31
USB1-210ENST00000565151 CCND2P30279 289 aa16.99■□□□□ 0.31
USB1-210ENST00000565151 PSEN2P49810 448 aa16.99■□□□□ 0.31
USB1-210ENST00000565151 BRDTQ58F21 947 aaPredicted RBP16.99■□□□□ 0.31
USB1-210ENST00000565151 TYW1BQ6NUM6 668 aa16.99■□□□□ 0.31
USB1-210ENST00000565151 DEFB128Q7Z7B8 93 aa16.99■□□□□ 0.31
USB1-210ENST00000565151 TMTC2Q8N394 836 aa16.99■□□□□ 0.31
USB1-210ENST00000565151 KCNB2Q92953 911 aa16.99■□□□□ 0.31
USB1-210ENST00000565151 RRP36Q96EU6 259 aaKnown RBP16.99■□□□□ 0.31
USB1-210ENST00000565151 INPP4AQ96PE3 977 aaPredicted RBP16.99■□□□□ 0.31
USB1-210ENST00000565151 NEK1Q96PY6 1258 aa16.99■□□□□ 0.31
USB1-210ENST00000565151 C16orf70Q9BSU1 422 aa16.99■□□□□ 0.31
USB1-210ENST00000565151 RTEL1Q9NZ71 1219 aa16.99■□□□□ 0.31
USB1-210ENST00000565151 SPTBN5Q9NRC6 3674 aaKnown RBP16.99■□□□□ 0.31
USB1-210ENST00000565151 LOXHD1Q8IVV2 1947 aa16.99■□□□□ 0.31
USB1-210ENST00000565151 MICAL3Q7RTP6 2002 aa16.99■□□□□ 0.31
USB1-210ENST00000565151 CNTNAP5Q8WYK1 1306 aa16.98■□□□□ 0.31
USB1-210ENST00000565151 SPATA31C2B4DYI2 1134 aa16.98■□□□□ 0.31
USB1-210ENST00000565151 MYOGP15173 224 aa16.98■□□□□ 0.31
USB1-210ENST00000565151 ICAM3P32942 547 aa16.98■□□□□ 0.31
USB1-210ENST00000565151 KIF5BP33176 963 aa16.98■□□□□ 0.31
USB1-210ENST00000565151 RABGGTBP53611 331 aa16.98■□□□□ 0.31
USB1-210ENST00000565151 PTGISQ16647 500 aa16.98■□□□□ 0.31
USB1-210ENST00000565151 DGKDQ16760 1214 aa16.98■□□□□ 0.31
USB1-210ENST00000565151 TRIM71Q2Q1W2 868 aaKnown RBP16.98■□□□□ 0.31
USB1-210ENST00000565151 TRAF7Q6Q0C0 670 aa16.98■□□□□ 0.31
USB1-210ENST00000565151 APOA5Q6Q788 366 aa16.98■□□□□ 0.31
USB1-210ENST00000565151 MICU3Q86XE3 530 aa16.98■□□□□ 0.31
USB1-210ENST00000565151 TIFAQ96CG3 184 aa16.98■□□□□ 0.31
USB1-210ENST00000565151 ALG1Q9BT22 464 aa16.98■□□□□ 0.31
USB1-210ENST00000565151 GTF2IRD1Q9UHL9 959 aa16.98■□□□□ 0.31
USB1-210ENST00000565151 SLC12A7Q9Y666 1083 aa16.98■□□□□ 0.31
USB1-210ENST00000565151 PITPNM1O00562 1244 aa16.97■□□□□ 0.31
USB1-210ENST00000565151 MFSD10Q14728 455 aa16.97■□□□□ 0.31
USB1-210ENST00000565151 UBE2SQ16763 222 aa16.97■□□□□ 0.31
USB1-210ENST00000565151 KIAA0753Q2KHM9 967 aa16.97■□□□□ 0.31
USB1-210ENST00000565151 DHX32Q7L7V1 743 aaKnown RBP16.97■□□□□ 0.31
USB1-210ENST00000565151 SPATA33Q96N06 139 aa16.97■□□□□ 0.31
USB1-210ENST00000565151 LZTS2Q9BRK4 669 aa16.97■□□□□ 0.31
USB1-210ENST00000565151 ZNF576Q9H609 170 aa16.97■□□□□ 0.31
USB1-210ENST00000565151 XIRP2A4UGR9 3374 aa16.97■□□□□ 0.31
USB1-210ENST00000565151 TMEM265A0A087WTH1 108 aa16.96■□□□□ 0.31
USB1-210ENST00000565151 ADAMTS3O15072 1205 aa16.96■□□□□ 0.31
USB1-210ENST00000565151 ATP9AO75110 1047 aa16.96■□□□□ 0.31
USB1-210ENST00000565151 PPFIA4O75335 1185 aa16.96■□□□□ 0.31
USB1-210ENST00000565151 TGFB3P10600 412 aa16.96■□□□□ 0.31
USB1-210ENST00000565151 CDC27P30260 824 aa16.96■□□□□ 0.31
USB1-210ENST00000565151 GNAQP50148 359 aa16.96■□□□□ 0.31
USB1-210ENST00000565151 TRAF1Q13077 416 aa16.96■□□□□ 0.31
USB1-210ENST00000565151 USP38Q8NB14 1042 aa16.96■□□□□ 0.31
USB1-210ENST00000565151 ARHGEF15O94989 841 aa16.95■□□□□ 0.3
USB1-210ENST00000565151 CALM1P0DP23 149 aa16.95■□□□□ 0.3
USB1-210ENST00000565151 CALM2P0DP24 149 aa16.95■□□□□ 0.3
USB1-210ENST00000565151 CALM3P0DP25 149 aa16.95■□□□□ 0.3
USB1-210ENST00000565151 ITGB5P18084 799 aa16.95■□□□□ 0.3
USB1-210ENST00000565151 HOXC8P31273 242 aa16.95■□□□□ 0.3
USB1-210ENST00000565151 RBL2Q08999 1139 aa16.95■□□□□ 0.3
USB1-210ENST00000565151 MBTPS1Q14703 1052 aa16.95■□□□□ 0.3
USB1-210ENST00000565151 PCNX4Q63HM2 1172 aa16.95■□□□□ 0.3
USB1-210ENST00000565151 WWC2Q6AWC2 1192 aa16.95■□□□□ 0.3
USB1-210ENST00000565151 KCNV1Q6PIU1 500 aa16.95■□□□□ 0.3
USB1-210ENST00000565151 RPUSD2Q8IZ73 545 aaKnown RBP16.95■□□□□ 0.3
USB1-210ENST00000565151 CCDC136Q96JN2 1154 aa16.95■□□□□ 0.3
USB1-210ENST00000565151 OSBPL7Q9BZF2 842 aa16.95■□□□□ 0.3
USB1-210ENST00000565151 NKX2-4Q9H2Z4 354 aa16.95■□□□□ 0.3
USB1-210ENST00000565151 SNX14Q9Y5W7 946 aa16.95■□□□□ 0.3
USB1-210ENST00000565151 NBNO60934 754 aa16.94■□□□□ 0.3
USB1-210ENST00000565151 CKBP12277 381 aa16.94■□□□□ 0.3
USB1-210ENST00000565151 ADGRE1Q14246 886 aa16.94■□□□□ 0.3
USB1-210ENST00000565151 RNF20Q5VTR2 975 aa16.94■□□□□ 0.3
USB1-210ENST00000565151 CYFIP1Q7L576 1253 aa16.94■□□□□ 0.3
USB1-210ENST00000565151 TRIM50Q86XT4 487 aa16.94■□□□□ 0.3
USB1-210ENST00000565151 SMARCC2Q8TAQ2 1214 aa16.94■□□□□ 0.3
USB1-210ENST00000565151 GPR20Q99678 358 aa16.94■□□□□ 0.3
USB1-210ENST00000565151 PSTPIP2Q9H939 334 aa16.94■□□□□ 0.3
USB1-210ENST00000565151 SEC63Q9UGP8 760 aaKnown RBP16.94■□□□□ 0.3
USB1-210ENST00000565151 LGALS2P05162 132 aa16.93■□□□□ 0.3
USB1-210ENST00000565151 HSPA4P34932 840 aa16.93■□□□□ 0.3
USB1-210ENST00000565151 C7orf31Q8N865 590 aa16.93■□□□□ 0.3
USB1-210ENST00000565151 MAFAQ8NHW3 353 aaPredicted RBP16.93■□□□□ 0.3
USB1-210ENST00000565151 PRDM12Q9H4Q4 367 aa16.93■□□□□ 0.3
USB1-210ENST00000565151 MLXIPQ9HAP2 919 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms