RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 CDC27P30260 824 aa15.67■□□□□ 0.1
VPS9D1-204ENST00000565023 METAP2P50579 478 aaKnown RBP eCLIP15.67■□□□□ 0.1
VPS9D1-204ENST00000565023 NAPAP54920 295 aa15.67■□□□□ 0.1
VPS9D1-204ENST00000565023 MRPS9P82933 396 aaKnown RBP15.67■□□□□ 0.1
VPS9D1-204ENST00000565023 SP4Q02446 784 aa15.67■□□□□ 0.1
VPS9D1-204ENST00000565023 DGKDQ16760 1214 aa15.67■□□□□ 0.1
VPS9D1-204ENST00000565023 WWC2Q6AWC2 1192 aa15.67■□□□□ 0.1
VPS9D1-204ENST00000565023 ZNF365Q70YC5 407 aa15.67■□□□□ 0.1
VPS9D1-204ENST00000565023 BCAS3Q9H6U6 928 aa15.67■□□□□ 0.1
VPS9D1-204ENST00000565023 PKD2L1Q9P0L9 805 aa15.67■□□□□ 0.1
VPS9D1-204ENST00000565023 V9GY48 417 aaPredicted RBP15.67■□□□□ 0.1
VPS9D1-204ENST00000565023 EIF5BO60841 1220 aaKnown RBP15.66■□□□□ 0.1
VPS9D1-204ENST00000565023 PPFIA3O75145 1194 aa15.66■□□□□ 0.1
VPS9D1-204ENST00000565023 SUPT20HL2P0C7V6 817 aa15.66■□□□□ 0.1
VPS9D1-204ENST00000565023 RPS6KB1P23443 525 aa15.66■□□□□ 0.1
VPS9D1-204ENST00000565023 ADD1P35611 737 aaKnown RBP15.66■□□□□ 0.1
VPS9D1-204ENST00000565023 PSEN2P49810 448 aa15.66■□□□□ 0.1
VPS9D1-204ENST00000565023 HSDL1Q3SXM5 330 aa15.66■□□□□ 0.1
VPS9D1-204ENST00000565023 GNPTABQ3T906 1256 aa15.66■□□□□ 0.1
VPS9D1-204ENST00000565023 TMEM240Q5SV17 173 aa15.66■□□□□ 0.1
VPS9D1-204ENST00000565023 CELF3Q5SZQ8 465 aaKnown RBP15.66■□□□□ 0.1
VPS9D1-204ENST00000565023 MYSM1Q5VVJ2 828 aa15.66■□□□□ 0.1
VPS9D1-204ENST00000565023 KCNV1Q6PIU1 500 aa15.66■□□□□ 0.1
VPS9D1-204ENST00000565023 C16orf59Q7L2K0 433 aa15.66■□□□□ 0.1
VPS9D1-204ENST00000565023 DEFB128Q7Z7B8 93 aa15.66■□□□□ 0.1
VPS9D1-204ENST00000565023 KAT2BQ92831 832 aa15.66■□□□□ 0.1
VPS9D1-204ENST00000565023 PGBD1Q96JS3 809 aa15.66■□□□□ 0.1
VPS9D1-204ENST00000565023 COL25A1Q9BXS0 654 aaPredicted RBP15.66■□□□□ 0.1
VPS9D1-204ENST00000565023 SEZ6LQ9BYH1 1024 aa15.66■□□□□ 0.1
VPS9D1-204ENST00000565023 WNT8AQ9H1J5 351 aa15.66■□□□□ 0.1
VPS9D1-204ENST00000565023 IL23AQ9NPF7 189 aa15.66■□□□□ 0.1
VPS9D1-204ENST00000565023 SPDYE3A6NKU9 549 aa15.65■□□□□ 0.1
VPS9D1-204ENST00000565023 PSMA5P28066 241 aa15.65■□□□□ 0.1
VPS9D1-204ENST00000565023 MFSD10Q14728 455 aa15.65■□□□□ 0.1
VPS9D1-204ENST00000565023 PTGISQ16647 500 aa15.65■□□□□ 0.1
VPS9D1-204ENST00000565023 ZNF697Q5TEC3 545 aa15.65■□□□□ 0.1
VPS9D1-204ENST00000565023 NFRKBQ6P4R8 1299 aa15.65■□□□□ 0.1
VPS9D1-204ENST00000565023 CYFIP1Q7L576 1253 aa15.65■□□□□ 0.1
VPS9D1-204ENST00000565023 OTOP2Q7RTS6 562 aa15.65■□□□□ 0.1
VPS9D1-204ENST00000565023 C7orf31Q8N865 590 aa15.65■□□□□ 0.1
VPS9D1-204ENST00000565023 PPTC7Q8NI37 304 aa15.65■□□□□ 0.1
VPS9D1-204ENST00000565023 FAM217BQ9NTX9 383 aaPredicted RBP15.65■□□□□ 0.1
VPS9D1-204ENST00000565023 HDAC6Q9UBN7 1215 aa15.65■□□□□ 0.1
VPS9D1-204ENST00000565023 PCDHA6Q9UN73 950 aa15.65■□□□□ 0.1
VPS9D1-204ENST00000565023 PCDHA8Q9Y5H6 950 aa15.65■□□□□ 0.1
VPS9D1-204ENST00000565023 FRMPD4Q14CM0 1322 aa15.65■□□□□ 0.1
VPS9D1-204ENST00000565023 GRXCR1A8MXD5 290 aa15.64■□□□□ 0.09
VPS9D1-204ENST00000565023 RBAK-RBAKDNI3L0D1 243 aa15.64■□□□□ 0.09
VPS9D1-204ENST00000565023 PIK3CDO00329 1044 aa15.64■□□□□ 0.09
VPS9D1-204ENST00000565023 NOP56O00567 594 aaKnown RBP15.64■□□□□ 0.09
VPS9D1-204ENST00000565023 FIBPO43427 364 aa15.64■□□□□ 0.09
VPS9D1-204ENST00000565023 SEMA3FQ13275 785 aa15.64■□□□□ 0.09
VPS9D1-204ENST00000565023 KIAA0753Q2KHM9 967 aa15.64■□□□□ 0.09
VPS9D1-204ENST00000565023 C8orf34Q49A92 452 aa15.64■□□□□ 0.09
VPS9D1-204ENST00000565023 PCNX4Q63HM2 1172 aa15.64■□□□□ 0.09
VPS9D1-204ENST00000565023 FAM109BQ6ICB4 259 aaPredicted RBP15.64■□□□□ 0.09
VPS9D1-204ENST00000565023 GDF6Q6KF10 455 aaPredicted RBP15.64■□□□□ 0.09
VPS9D1-204ENST00000565023 TYW1BQ6NUM6 668 aa15.64■□□□□ 0.09
VPS9D1-204ENST00000565023 GPR153Q6NV75 609 aa15.64■□□□□ 0.09
VPS9D1-204ENST00000565023 PSRC1Q6PGN9 363 aaPredicted RBP15.64■□□□□ 0.09
VPS9D1-204ENST00000565023 GBF1Q92538 1859 aa15.64■□□□□ 0.09
VPS9D1-204ENST00000565023 EMID1Q96A84 441 aaPredicted RBP15.64■□□□□ 0.09
VPS9D1-204ENST00000565023 TTC28Q96AY4 2481 aa15.64■□□□□ 0.09
VPS9D1-204ENST00000565023 INPP4AQ96PE3 977 aaPredicted RBP15.64■□□□□ 0.09
VPS9D1-204ENST00000565023 LARP6Q9BRS8 491 aaKnown RBP15.64■□□□□ 0.09
VPS9D1-204ENST00000565023 TANC1Q9C0D5 1861 aa15.63■□□□□ 0.09
VPS9D1-204ENST00000565023 ZBBXA8MT70 800 aa15.63■□□□□ 0.09
VPS9D1-204ENST00000565023 SPATA31C2B4DYI2 1134 aa15.63■□□□□ 0.09
VPS9D1-204ENST00000565023 FGBP02675 491 aa15.63■□□□□ 0.09
VPS9D1-204ENST00000565023 TGFB3P10600 412 aa15.63■□□□□ 0.09
VPS9D1-204ENST00000565023 CCT2P78371 535 aaKnown RBP15.63■□□□□ 0.09
VPS9D1-204ENST00000565023 ZNF200P98182 395 aaPredicted RBP15.63■□□□□ 0.09
VPS9D1-204ENST00000565023 PTPN11Q06124 597 aaPredicted RBP15.63■□□□□ 0.09
VPS9D1-204ENST00000565023 FUT2Q10981 343 aa15.63■□□□□ 0.09
VPS9D1-204ENST00000565023 UTP14CQ5TAP6 766 aaKnown RBP15.63■□□□□ 0.09
VPS9D1-204ENST00000565023 NLRX1Q86UT6 975 aa15.63■□□□□ 0.09
VPS9D1-204ENST00000565023 RETREG2Q8NC44 543 aa15.63■□□□□ 0.09
VPS9D1-204ENST00000565023 KATNAL1Q9BW62 490 aa15.63■□□□□ 0.09
VPS9D1-204ENST00000565023 TMEM260Q9NX78 707 aa15.63■□□□□ 0.09
VPS9D1-204ENST00000565023 MTMR10Q9NXD2 777 aa15.63■□□□□ 0.09
VPS9D1-204ENST00000565023 TELO2Q9Y4R8 837 aa15.63■□□□□ 0.09
VPS9D1-204ENST00000565023 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.62■□□□□ 0.09
VPS9D1-204ENST00000565023 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.62■□□□□ 0.09
VPS9D1-204ENST00000565023 SMCO2A6NFE2 343 aa15.62■□□□□ 0.09
VPS9D1-204ENST00000565023 STXBP3O00186 592 aa15.62■□□□□ 0.09
VPS9D1-204ENST00000565023 STAM2O75886 525 aa15.62■□□□□ 0.09
VPS9D1-204ENST00000565023 SEC24BO95487 1268 aa15.62■□□□□ 0.09
VPS9D1-204ENST00000565023 ICAM3P32942 547 aa15.62■□□□□ 0.09
VPS9D1-204ENST00000565023 ADCY7P51828 1080 aa15.62■□□□□ 0.09
VPS9D1-204ENST00000565023 SMAD3P84022 425 aaKnown RBP15.62■□□□□ 0.09
VPS9D1-204ENST00000565023 NEDD9Q14511 834 aa15.62■□□□□ 0.09
VPS9D1-204ENST00000565023 PHKBQ93100 1093 aa15.62■□□□□ 0.09
VPS9D1-204ENST00000565023 UPF3BQ9BZI7 483 aaKnown RBP15.62■□□□□ 0.09
VPS9D1-204ENST00000565023 EHMT1Q9H9B1 1298 aa15.62■□□□□ 0.09
VPS9D1-204ENST00000565023 CXXC1Q9P0U4 656 aaPredicted RBP15.62■□□□□ 0.09
VPS9D1-204ENST00000565023 KAT6AQ92794 2004 aa15.61■□□□□ 0.09
VPS9D1-204ENST00000565023 CCDC196A0A1B0GTZ2 297 aa15.61■□□□□ 0.09
VPS9D1-204ENST00000565023 PPFIA4O75335 1185 aa15.61■□□□□ 0.09
VPS9D1-204ENST00000565023 F2P00734 622 aa15.61■□□□□ 0.09
VPS9D1-204ENST00000565023 LGALS2P05162 132 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms